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YXK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F04C02sing1.40Å1.37Å
F03C02sing1.40Å1.36Å
C02C05sing1.53Å1.53Å
C02F01sing1.40Å1.37Å
C05N06sing1.46Å1.45Å
C07N06sing1.37Å1.32ÅAromatic
C07C08doub1.35Å1.38ÅAromatic
N06C10sing1.35Å1.32ÅAromatic
C08N09sing1.34Å1.32ÅAromatic
C10C11sing1.51Å1.52Å
C10N09doub1.31Å1.32ÅAromatic
C11C12sing1.47Å1.52Å
C12N13trip1.14Å1.12Å
C05H1sing1.09Å1.10Å
C05H2sing1.09Å1.10Å
C07H3sing1.08Å1.08Å
C08H4sing1.08Å1.08Å
C11H5sing1.09Å1.10Å
C11H6sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F04C02F03108.8°109.5°
F04C02C05110.3°109.4°
F04C02F01108.7°109.5°
F03C02C05109.6°109.5°
F03C02F01109.7°109.5°
C05C02F01109.8°109.4°
C02C05N06113.8°109.5°
C02C05H1108.4°109.5°
C02C05H2108.4°109.5°
C05N06C07126.5°126.4°
C05N06C10125.0°126.4°
N06C05H1108.4°109.4°
N06C05H2108.4°109.4°
N06C07C08106.6°106.9°
C07N06C10108.5°107.2°
N06C07H3126.7°126.6°
C07C08N09107.4°108.0°
C08C07H3126.7°126.6°
C07C08H4126.3°126.0°
N06C10C11125.0°125.6°
N06C10N09109.6°108.7°
C08N09C10107.8°109.3°
N09C08H4126.3°126.0°
C11C10N09125.4°125.7°
C10C11C12110.7°109.5°
C10C11H5109.2°109.5°
C10C11H6109.1°109.4°
C11C12N13178.6°180.0°
C12C11H5109.1°109.5°
C12C11H6109.2°109.5°
H1C05H2109.5°109.5°
H5C11H6109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F04C02F03C05120.6°120.0°
F04C02F03F01118.8°120.1°
F04C02C05F01119.8°120.0°
F04C02C05N06179.0°180.0°
F04C02C05H160.3°60.1°
F04C02C05H258.4°60.0°
F03C02C05F01120.5°120.0°
F03C02C05N0661.3°60.0°
F03C02C05H159.4°59.9°
F03C02C05H2178.1°180.0°
C02C05N06H1120.6°120.0°
C02C05N06H2120.6°120.0°
C02C05N06C0790.6°95.0°
C02C05N06C1091.6°85.0°
C02C05H1H2118.0°120.1°
F01C02C05N0659.3°60.0°
F01C02C05H1179.9°179.9°
F01C02C05H261.4°60.0°
C05N06C07C10178.2°180.0°
C05N06C07C08178.7°179.9°
C05N06C10C110.9°0.0°
C05N06C10N09179.1°179.7°
N06C05H1H2118.1°120.0°
C05N06C07H31.4°0.1°
N06C07C08H3180.0°180.0°
N06C07C08N090.1°0.2°
C07N06C10C11179.1°180.0°
C07N06C10N090.9°0.3°
C07N06C05H130.1°145.1°
C07N06C05H2148.8°25.1°
N06C07C08H4179.9°179.9°
C08C07N06C100.5°0.0°
C07C08N09H4180.0°179.8°
C07C08N09C100.6°0.4°
N06C10N09C080.9°0.4°
N06C10C11N09180.0°179.7°
N06C10C11C12120.4°89.7°
C10N06C05H1147.8°35.0°
C10N06C05H229.1°155.0°
C10N06C07H3179.5°180.0°
N06C10C11H50.3°30.3°
N06C10C11H6119.3°150.3°
C08N09C10C11179.1°179.9°
N09C08C07H3179.9°179.8°
C10C11C12H5120.2°120.1°
C10C11C12H6120.2°120.0°
C10C11C12N1356.1°136.4°
C10C11H5H6119.4°119.9°
N09C10C11C1259.6°89.9°
C10N09C08H4179.4°179.8°
N09C10C11H5179.7°150.0°
N09C10C11H660.6°30.1°
C12C11H5H6119.4°120.0°
N13C12C11H564.1°16.4°
N13C12C11H6176.3°103.6°
H3C07C08H40.1°0.0°

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PDB entries from 2024-08-07

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