Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YX4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O22C21sing1.43Å1.44Å
O22C23sing1.43Å1.41Å
C21C26sing1.53Å1.53Å
C23C24sing1.53Å1.50Å
C26C25sing1.53Å1.53Å
C24C25sing1.53Å1.54Å
C25C27sing1.53Å1.53Å
C38C15sing1.53Å1.52Å
C27N3sing1.46Å1.50Å
C27C28sing1.51Å1.52Å
F34C9sing1.35Å1.33Å
C15C8sing1.51Å1.54Å
C15O36sing1.43Å1.44Å
C15C35sing1.53Å1.52Å
C9C8doub1.38Å1.39ÅAromatic
C9C2sing1.39Å1.39ÅAromatic
C8C7sing1.39Å1.41ÅAromatic
N3C2sing1.38Å1.40ÅAromatic
N3C4sing1.38Å1.40ÅAromatic
C2C1doub1.40Å1.41ÅAromatic
C20N19sing1.46Å1.46Å
C7C6doub1.38Å1.38ÅAromatic
C4C5doub1.40Å1.36ÅAromatic
C4C10sing1.39Å1.40ÅAromatic
C1C6sing1.39Å1.40ÅAromatic
C1C5sing1.47Å1.45ÅAromatic
C5N13sing1.33Å1.34ÅAromatic
C10C11doub1.40Å1.40ÅAromatic
C28N33doub1.32Å1.34ÅAromatic
C28C29sing1.38Å1.39ÅAromatic
N13C12doub1.31Å1.34ÅAromatic
C11C12sing1.40Å1.39ÅAromatic
C11C14sing1.48Å1.47Å
N19C14sing1.37Å1.36ÅAromatic
N19N18sing1.29Å1.36ÅAromatic
N33C32sing1.32Å1.35ÅAromatic
F37C29sing1.35Å1.35Å
C14C16doub1.37Å1.37ÅAromatic
N18N17doub1.29Å1.32ÅAromatic
C29C30doub1.39Å1.38ÅAromatic
C16N17sing1.34Å1.36ÅAromatic
C16C39sing1.51Å1.50Å
C32C31doub1.38Å1.38ÅAromatic
C30C31sing1.39Å1.40ÅAromatic
C20H48sing1.09Å1.10Å
C20H47sing1.09Å1.10Å
C20H49sing1.09Å1.10Å
C21H51sing1.09Å1.10Å
C21H50sing1.09Å1.10Å
C23H53sing1.09Å1.10Å
C23H52sing1.09Å1.10Å
C24H55sing1.09Å1.10Å
C24H54sing1.09Å1.10Å
C12H46sing1.08Å1.08Å
C27H59sing1.09Å1.10Å
C6H43sing1.08Å1.08Å
C7H44sing1.08Å1.08Å
C10H45sing1.08Å1.08Å
C25H56sing1.09Å1.10Å
C26H58sing1.09Å1.10Å
C26H57sing1.09Å1.10Å
C30H60sing1.08Å1.08Å
C31H61sing1.08Å1.08Å
C32H62sing1.08Å1.08Å
C35H63sing1.09Å1.10Å
C35H64sing1.09Å1.10Å
C35H65sing1.09Å1.10Å
O36H66sing0.97Å0.95Å
C38H67sing1.09Å1.10Å
C38H68sing1.09Å1.10Å
C38H69sing1.09Å1.10Å
C39H42sing1.09Å1.10Å
C39H41sing1.09Å1.10Å
C39H40sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C21O22C23111.9°114.1°
O22C21C26112.4°109.4°
O22C21H51108.7°109.5°
O22C21H50108.7°109.5°
O22C23C24110.4°109.5°
O22C23H53109.2°109.5°
O22C23H52109.2°109.5°
C21C26C25111.4°109.2°
C26C21H51108.7°109.5°
C26C21H50108.7°109.4°
C21C26H58109.0°109.5°
C21C26H57109.0°109.6°
C23C24C25109.8°109.1°
C24C23H53109.2°109.5°
C24C23H52109.2°109.5°
C23C24H55109.4°109.5°
C23C24H54109.4°109.5°
C26C25C24108.9°109.0°
C26C25C27110.0°109.5°
C26C25H56109.0°109.6°
C25C26H58109.0°109.5°
C25C26H57109.0°109.5°
C24C25C27110.9°109.5°
C25C24H55109.4°109.5°
C25C24H54109.4°109.6°
C24C25H56109.0°109.6°
C25C27N3113.1°109.5°
C25C27C28117.2°109.5°
C25C27H59105.9°109.4°
C27C25H56109.0°109.5°
C38C15C8111.2°109.4°
C38C15O36106.9°109.5°
C38C15C35110.5°109.5°
C15C38H67109.5°109.5°
C15C38H68109.4°109.4°
C15C38H69109.5°109.4°
N3C27C28107.7°109.5°
C27N3C2126.4°124.9°
C27N3C4126.5°124.9°
N3C27H59106.2°109.5°
C27C28N33118.2°119.7°
C27C28C29119.8°119.6°
C28C27H59106.0°109.5°
F34C9C8118.7°120.0°
F34C9C2118.5°120.1°
C8C15O36110.3°109.5°
C8C15C35111.1°109.5°
C15C8C9123.9°119.7°
C15C8C7119.2°119.7°
O36C15C35106.6°109.5°
C15O36H66109.5°114.0°
C15C35H63109.5°109.5°
C15C35H64109.4°109.4°
C15C35H65109.5°109.5°
C8C9C2122.8°120.0°
C9C8C7116.9°120.6°
C9C2N3132.2°132.3°
C9C2C1118.9°119.4°
C8C7C6122.1°120.3°
C8C7H44119.0°119.9°
C2N3C4106.8°110.2°
N3C2C1108.9°108.4°
N3C4C5110.8°108.5°
N3C4C10130.9°132.4°
C2C1C6119.7°120.0°
C2C1C5106.4°106.6°
C20N19C14129.1°126.0°
C20N19N18120.8°126.0°
N19C20H48109.5°109.5°
N19C20H47109.5°109.4°
N19C20H49109.5°109.5°
C7C6C1119.7°119.8°
C7C6H43120.2°120.1°
C6C7H44119.0°119.8°
C5C4C10118.1°119.0°
C4C5C1107.1°106.3°
C4C5N13125.3°120.7°
C4C10C11118.3°118.3°
C4C10H45120.8°120.9°
C6C1C5133.8°133.3°
C1C6H43120.1°120.1°
C1C5N13127.4°133.0°
C5N13C12116.5°121.7°
C10C11C12118.2°119.2°
C10C11C14120.3°120.4°
C11C10H45120.8°120.8°
N33C28C29121.9°120.7°
C28N33C32118.2°121.8°
C28C29F37121.0°120.5°
C28C29C30119.8°119.1°
N13C12C11123.6°121.0°
N13C12H46118.2°119.5°
C12C11C14121.3°120.4°
C11C12H46118.2°119.5°
C11C14N19124.7°127.1°
C11C14C16129.8°127.1°
C14N19N18110.0°108.0°
N19C14C16105.5°105.8°
N19N18N17106.9°110.6°
N33C32C31123.2°120.8°
N33C32H62118.4°119.6°
F37C29C30119.1°120.4°
C14C16N17107.8°106.4°
C14C16C39129.6°126.9°
N18N17C16109.7°109.3°
C29C30C31118.3°118.4°
C29C30H60120.9°120.8°
N17C16C39122.6°126.8°
C16C39H42109.5°109.4°
C16C39H41109.5°109.4°
C16C39H40109.5°109.5°
C32C31C30118.7°119.2°
C32C31H61120.6°120.4°
C31C32H62118.4°119.6°
C31C30H60120.9°120.8°
C30C31H61120.7°120.4°
H48C20H47109.4°109.4°
H48C20H49109.5°109.5°
H47C20H49109.5°109.5°
H51C21H50109.4°109.5°
H53C23H52109.5°109.5°
H55C24H54109.5°109.5°
H58C26H57109.5°109.6°
H63C35H64109.4°109.4°
H63C35H65109.5°109.6°
H64C35H65109.5°109.5°
H67C38H68109.5°109.5°
H67C38H69109.5°109.5°
H68C38H69109.5°109.5°
H42C39H41109.4°109.5°
H42C39H40109.5°109.5°
H41C39H40109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O22C21C26H51120.5°120.0°
O22C21C26H50120.4°120.0°
C21O22C23C2462.9°61.1°
O22C21C26C2551.1°57.6°
O22C21H51H50118.6°120.1°
C21O22C23H53177.0°58.8°
C21O22C23H5257.2°178.8°
O22C21C26H58171.4°177.5°
O22C21C26H5769.2°62.3°
C23O22C21C2657.6°61.2°
O22C23C24H53120.1°120.0°
O22C23C24H52120.1°120.0°
O22C23C24C2561.9°57.6°
C23O22C21H5162.9°58.8°
C23O22C21H50178.0°178.9°
O22C23H53H52119.6°120.0°
O22C23C24H5558.1°62.3°
O22C23C24H54178.0°177.5°
C21C26C25H58120.3°119.9°
C21C26C25H57120.3°120.0°
C21C26C25C2449.8°57.0°
C21C26C25C27171.5°176.9°
C26C21H51H50118.7°120.0°
C21C26C25H5669.0°62.9°
C21C26H58H57119.1°120.2°
C23C24C25C2654.9°57.0°
C23C24C25H55120.0°119.9°
C23C24C25H54120.1°119.9°
C23C24C25C27176.1°176.8°
C24C23H53H52119.6°120.0°
C23C24H55H54119.9°120.2°
C23C24C25H5663.9°63.0°
C26C25C24C27121.2°119.9°
C26C25C24H56118.8°120.0°
C26C25C27H56119.5°120.3°
C26C25C27N353.8°60.4°
C26C25C27C28179.9°179.5°
C25C26C21H5169.3°62.3°
C25C26C21H50171.6°177.6°
C26C25C24H5565.1°62.9°
C26C25C24H54175.0°176.9°
C26C25C27H5962.1°59.6°
C25C26H58H57119.2°120.1°
C24C25C27H56120.0°120.2°
C24C25C27N3174.2°180.0°
C24C25C27C2859.6°60.0°
C25C24C23H53177.9°62.4°
C25C24C23H5258.2°177.6°
C25C24H55H54119.9°120.2°
C24C25C27H5958.3°60.0°
C24C25C26H58170.1°176.9°
C24C25C26H5770.5°62.9°
C25C27N3C28131.1°120.0°
C25C27N3H59115.7°120.0°
C25C27C28H59117.9°120.0°
C25C27N3C2117.5°126.3°
C25C27N3C455.1°53.7°
C25C27C28N3340.2°53.2°
C25C27C28C29136.6°126.6°
C27C25C24H5556.0°56.9°
C27C25C24H5463.9°63.2°
C27C25C26H5868.3°63.2°
C27C25C26H5751.2°56.9°
C38C15C8O36118.4°120.0°
C38C15C8C35123.6°120.0°
C38C15O36C35118.2°120.0°
C38C15C8C961.7°60.0°
C38C15C8C7120.3°120.0°
C38C15C35H63180.0°180.0°
C38C15C35H6460.0°60.0°
C38C15C35H6560.0°59.9°
C38C15O36H66180.0°180.0°
C15C38H67H68120.0°120.0°
C15C38H67H69120.0°120.0°
C15C38H68H69120.0°120.0°
N3C27C28H59113.3°120.0°
C27N3C2C99.4°0.0°
C27N3C2C4173.8°180.0°
C27N3C2C1172.8°180.0°
C27N3C4C5172.4°180.0°
C27N3C4C1011.7°0.9°
N3C27C28N3388.6°66.9°
N3C27C28C2994.7°113.4°
N3C27C25H5665.8°59.9°
C28C27N3C2111.5°113.7°
C28C27N3C476.0°66.3°
C27C28N33C29176.7°179.7°
C27C28N33C32177.8°179.7°
C27C28C29F371.0°0.1°
C27C28C29C30177.8°180.0°
C28C27C25H5660.4°60.2°
F34C9C8C151.3°0.0°
F34C9C8C2179.2°180.0°
F34C9C8C7179.3°180.0°
F34C9C2N31.9°0.1°
F34C9C2C1179.5°180.0°
C8C15O36C35120.7°120.0°
C15C8C9C7178.0°180.0°
C15C8C9C2177.9°180.0°
C15C8C7C6177.9°180.0°
C15C8C7H442.1°0.0°
C8C15C35H6356.0°60.1°
C8C15C35H64176.0°180.0°
C8C15C35H6564.0°60.0°
C8C15O36H6659.0°60.0°
C8C15C38H67180.0°60.0°
C8C15C38H6860.0°180.0°
C8C15C38H6960.0°60.0°
O36C15C8C9179.9°180.0°
O36C15C8C71.9°0.0°
O36C15C35H6364.2°60.0°
O36C15C35H6455.8°60.0°
O36C15C35H65175.8°179.9°
O36C15C38H6759.6°180.0°
O36C15C38H6860.5°60.0°
O36C15C38H69179.6°60.0°
C35C15C8C961.9°60.0°
C35C15C8C7116.1°120.0°
C15C35H63H64120.0°119.9°
C15C35H63H65120.0°120.0°
C15C35H64H65120.0°120.0°
C35C15O36H6661.8°60.0°
C35C15C38H6756.0°60.0°
C35C15C38H68176.1°60.0°
C35C15C38H6963.9°180.0°
C8C9C2N3177.3°180.0°
C8C9C2C10.3°0.0°
C9C8C7C60.2°0.0°
C9C8C7H44179.8°179.9°
C2C9C8C70.1°0.0°
C9C2N3C1177.8°179.9°
C9C2N3C4176.8°180.0°
C9C2C1C60.6°0.0°
C9C2C1C5177.9°180.0°
C8C7C6H44180.0°179.9°
C8C7C6C10.5°0.0°
C8C7C6H43179.5°180.0°
C2N3C4C51.3°0.0°
C2N3C4C10174.5°179.1°
N3C2C1C6177.5°180.0°
N3C2C1C50.2°0.0°
C2N3C27H591.7°6.3°
C4N3C2C10.9°0.0°
N3C4C5C10176.4°179.2°
N3C4C5C11.2°0.0°
N3C4C5N13175.8°180.0°
N3C4C10C11174.1°179.5°
C4N3C27H59170.8°173.7°
N3C4C10H455.9°0.6°
C2C1C6C70.7°0.0°
C2C1C5C40.6°0.0°
C2C1C6C5176.3°180.0°
C2C1C5N13175.0°180.0°
C2C1C6H43179.3°180.0°
C20N19C14C112.3°0.0°
C20N19C14N18177.8°179.8°
C20N19C14C16178.1°179.9°
C20N19N18N17177.8°179.9°
N19C20H48H47120.0°119.9°
N19C20H48H49120.0°120.0°
N19C20H47H49120.0°120.0°
C7C6C1H43180.0°180.0°
C7C6C1C5177.0°180.0°
C4C5C1C6176.1°180.0°
C4C5C1N13174.5°180.0°
C5C4C10C111.5°0.5°
C4C5N13C120.7°0.5°
C5C4C10H45178.5°179.6°
C10C4C5C1175.3°179.2°
C10C4C5N130.7°0.8°
C4C10C11H45180.0°179.9°
C4C10C11C121.0°0.0°
C4C10C11C14173.4°179.7°
C6C1C5N131.7°0.0°
C1C6C7H44179.5°180.0°
C1C5N13C12172.8°179.5°
C5C1C6H432.9°0.0°
C5N13C12C111.2°0.1°
C5N13C12H46178.8°180.0°
C10C11C12N130.4°0.3°
C10C11C12C14174.3°179.7°
C10C11C14N19140.3°47.5°
C10C11C14C1640.2°132.6°
C10C11C12H46179.6°179.8°
N33C28C29F37175.6°179.8°
N33C28C29C301.2°0.3°
C28N33C32C310.6°0.6°
N33C28C27H59158.1°173.1°
C28N33C32H62179.5°179.7°
C29C28N33C321.1°0.5°
C28C29F37C30176.9°179.9°
C28C29C30C310.7°0.0°
C29C28C27H5918.6°6.6°
C28C29C30H60179.3°180.0°
N13C12C11H46180.0°179.9°
N13C12C11C14174.7°180.0°
C12C11C14N1945.4°132.8°
C12C11C14C16134.0°47.1°
C12C11C10H45179.0°179.9°
C11C14N19C16179.5°179.9°
C11C14N19N18179.8°179.8°
C11C14C16N17179.8°180.0°
C11C14C16C391.0°0.3°
C14C11C12H465.3°0.1°
C14C11C10H456.6°0.2°
C14N19N18N170.2°0.4°
N19C14C16N170.7°0.1°
N19C14C16C39178.6°179.7°
C14N19C20H48177.6°85.2°
C14N19C20H4757.7°154.9°
C14N19C20H4962.3°34.9°
N18N19C14C160.3°0.2°
N19N18N17C160.7°0.4°
N18N19C20H480.0°95.1°
N18N19C20H47120.0°24.8°
N18N19C20H49120.0°144.9°
N33C32C31H62180.0°179.7°
N33C32C31C300.1°0.3°
N33C32C31H61179.9°179.8°
F37C29C30C31176.2°180.0°
F37C29C30H603.8°0.1°
C14C16N17N180.9°0.3°
C14C16N17C39179.3°179.7°
C14C16C39H42179.1°89.6°
C14C16C39H4159.2°30.3°
C14C16C39H4060.8°150.3°
N18N17C16C39178.4°180.0°
C29C30C31C320.2°0.1°
C29C30C31H60180.0°180.0°
C29C30C31H61179.8°179.9°
N17C16C39H420.0°90.0°
N17C16C39H41120.0°150.1°
N17C16C39H40120.0°30.1°
C16C39H42H41120.0°119.9°
C16C39H42H40120.0°120.0°
C16C39H41H40120.0°120.0°
C32C31C30H61180.0°179.9°
C32C31C30H60179.8°180.0°
C30C31C32H62179.9°180.0°
H48C20H47H49120.0°120.0°
H51C21C26H5850.9°57.6°
H51C21C26H57170.4°177.8°
H50C21C26H5868.2°62.5°
H50C21C26H5751.3°57.7°
H53C23C24H5562.0°177.7°
H53C23C24H5457.9°57.6°
H52C23C24H55178.2°57.7°
H52C23C24H5461.9°62.5°
H55C24C25H56176.1°177.1°
H54C24C25H5656.2°56.9°
H59C27C25H56178.3°179.8°
H43C6C7H440.5°0.0°
H56C25C26H5851.3°57.0°
H56C25C26H57170.7°177.1°
H60C30C31H610.2°0.1°
H61C31C32H620.1°0.1°
H63C35H64H65120.0°120.1°
H67C38H68H69120.0°120.1°
H42C39H41H40120.0°120.1°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon