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YWI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
BR1C23sing1.89Å1.90Å
C22C23doub1.38Å1.38ÅAromatic
C22C21sing1.38Å1.38ÅAromatic
C23C24sing1.38Å1.38ÅAromatic
C21C20doub1.38Å1.38ÅAromatic
C24C19doub1.39Å1.39ÅAromatic
C20C19sing1.39Å1.39ÅAromatic
C19C18sing1.48Å1.49Å
C18C25doub1.39Å1.39ÅAromatic
C18C17sing1.39Å1.39ÅAromatic
C25C14sing1.39Å1.39ÅAromatic
C17C16doub1.38Å1.38ÅAromatic
O1GC13doub1.22Å1.23Å
C14C13sing1.48Å1.50Å
C14C15doub1.40Å1.39ÅAromatic
C13N5sing1.35Å1.34Å
C16C15sing1.38Å1.38ÅAromatic
N5C12sing1.46Å1.46Å
C12C11sing1.53Å1.53Å
O3BPBdoub1.48Å1.48Å
O6C6doub1.22Å1.24Å
N1C6sing1.35Å1.39Å
N1C2sing1.36Å1.37Å
O3APBsing1.61Å1.61Å
O3AC10sing1.43Å1.39Å
N2C2sing1.37Å1.34Å
C11C10sing1.53Å1.52Å
C6C5sing1.41Å1.43Å
PBO2sing1.61Å1.60Å
PBO1Bsing1.61Å1.49Å
C2N3doub1.31Å1.33Å
O2C5'sing1.43Å1.43Å
C5C4doub1.40Å1.38ÅAromatic
C5N7sing1.36Å1.38ÅAromatic
N3C4sing1.34Å1.34Å
C4N9sing1.37Å1.40ÅAromatic
N7C8doub1.30Å1.32ÅAromatic
C5'C4'sing1.53Å1.51Å
N9C8sing1.37Å1.39ÅAromatic
N9C1'sing1.47Å1.50Å
O4'C4'sing1.44Å1.44Å
O4'C1'sing1.44Å1.44Å
C4'C3'sing1.55Å1.53Å
C3'O3'sing1.43Å1.43Å
C3'C2'sing1.55Å1.53Å
C1'C2'sing1.54Å1.52Å
C11HOG2sing1.09Å1.10Å
C11HO2'sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
C10HOB2sing1.09Å1.10Å
C10HOA2sing1.09Å1.10Å
C12H17sing1.09Å1.10Å
C12HOG3sing1.09Å1.10Å
N1HN1sing0.97Å1.00Å
N2HN22sing0.97Å1.00Å
N2HN21sing0.97Å1.00Å
C1'H1'sing1.09Å1.10Å
C15H19sing1.08Å1.08Å
C16H20sing1.08Å1.08Å
C17H21sing1.08Å1.08Å
C2'H2'sing1.09Å1.10Å
C2'H6sing1.09Å1.10Å
C20H22sing1.08Å1.08Å
C21H23sing1.08Å1.08Å
C22H24sing1.08Å1.08Å
C24H25sing1.08Å1.08Å
C25H26sing1.08Å1.08Å
C3'H3'sing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5''sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
N5H18sing0.97Å1.00Å
O1BH1sing0.97Å0.95Å
O3'HO3'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
BR1C23C22119.2°119.9°
BR1C23C24119.1°120.0°
C23C22C21118.8°120.2°
C22C23C24121.8°120.1°
C23C22H24120.6°119.9°
C22C21C20120.2°120.2°
C22C21H23119.9°119.9°
C21C22H24120.6°119.9°
C23C24C19119.7°119.9°
C23C24H25120.1°120.0°
C21C20C19121.0°119.8°
C21C20H22119.5°120.1°
C20C21H23119.9°119.9°
C24C19C20118.4°119.8°
C24C19C18120.9°120.1°
C19C24H25120.1°120.1°
C20C19C18120.4°120.1°
C19C20H22119.5°120.1°
C19C18C25122.0°120.0°
C19C18C17120.0°120.1°
C25C18C17117.8°119.9°
C18C25C14121.7°119.7°
C18C25H26119.2°120.2°
C18C17C16121.2°120.2°
C18C17H21119.4°119.9°
C25C14C13126.1°120.1°
C25C14C15118.6°119.8°
C14C25H26119.2°120.1°
C17C16C15120.0°120.3°
C17C16H20120.0°119.9°
C16C17H21119.4°119.9°
O1GC13C14121.0°120.0°
O1GC13N5122.5°120.0°
C13C14C15115.2°120.1°
C14C13N5113.7°120.0°
C14C15C16120.5°120.1°
C14C15H19119.8°119.9°
C13N5C12124.9°120.0°
C13N5H18117.6°120.0°
C16C15H19119.7°120.0°
C15C16H20120.0°119.9°
N5C12C11107.2°109.4°
N5C12H17110.0°109.5°
N5C12HOG3110.0°109.5°
C12N5H18117.6°120.0°
C12C11C10116.8°109.5°
C12C11HOG2107.6°109.5°
C12C11HO2'107.6°109.5°
C11C12H17110.0°109.4°
C11C12HOG3110.0°109.5°
O3BPBO3A106.1°109.5°
O3BPBO2105.7°109.5°
O3BPBO1B119.5°109.5°
O6C6N1120.4°120.8°
O6C6C5128.5°120.8°
C6N1C2125.5°120.3°
N1C6C5111.1°118.4°
C6N1HN1117.3°119.8°
N1C2N2116.4°119.0°
N1C2N3123.7°121.9°
C2N1HN1117.2°119.8°
PBO3AC10122.8°123.0°
O3APBO2109.0°109.5°
O3APBO1B107.9°109.5°
O3AC10C11114.6°109.5°
O3AC10HOB2108.2°109.5°
O3AC10HOA2108.2°109.4°
N2C2N3119.9°119.1°
C2N2HN22120.0°120.0°
C2N2HN21120.0°120.0°
C10C11HOG2107.6°109.5°
C10C11HO2'107.6°109.5°
C11C10HOB2108.2°109.5°
C11C10HOA2108.2°109.5°
C6C5C4118.9°118.6°
C6C5N7130.5°134.1°
O2PBO1B108.4°109.5°
PBO2C5'120.5°123.0°
PBO1BH1109.5°114.0°
C2N3C4112.1°121.1°
O2C5'C4'111.1°109.5°
O2C5'H5''109.1°109.4°
O2C5'H5'109.1°109.5°
C4C5N7110.6°107.3°
C5C4N3128.7°119.7°
C5C4N9106.4°106.1°
C5N7C8105.1°109.3°
N3C4N9124.9°134.2°
C4N9C8105.0°107.5°
C4N9C1'127.9°126.3°
N7C8N9112.9°109.8°
N7C8H8123.6°125.1°
C5'C4'O4'113.8°110.7°
C5'C4'C3'114.8°110.7°
C5'C4'H4'107.7°110.6°
C4'C5'H5''109.1°109.5°
C4'C5'H5'109.0°109.5°
C8N9C1'127.1°126.2°
N9C8H8123.6°125.1°
N9C1'O4'105.0°110.0°
N9C1'C2'118.5°109.9°
N9C1'H1'108.4°109.9°
C4'O4'C1'109.9°107.0°
O4'C4'C3'104.3°103.5°
O4'C4'H4'108.6°110.6°
O4'C1'C2'107.5°107.3°
O4'C1'H1'109.1°109.9°
C4'C3'O3'113.5°110.9°
C4'C3'C2'103.2°102.1°
C4'C3'H3'109.6°110.9°
C3'C4'H4'107.4°110.6°
O3'C3'C2'109.5°110.9°
O3'C3'H3'111.1°110.8°
C3'O3'HO3'109.5°114.0°
C3'C2'C1'104.1°104.2°
C3'C2'H2'110.8°110.5°
C3'C2'H6110.8°110.6°
C2'C3'H3'109.7°110.9°
C2'C1'H1'108.1°109.8°
C1'C2'H2'110.8°110.5°
C1'C2'H6110.8°110.5°
HOG2C11HO2'109.5°109.4°
HOB2C10HOA2109.4°109.5°
H17C12HOG3109.5°109.5°
HN22N2HN21120.0°120.0°
H2'C2'H6109.5°110.5°
H5''C5'H5'109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
BR1C23C22C24179.9°179.8°
BR1C23C22C21178.9°179.9°
BR1C23C24C19179.1°179.7°
BR1C23C22H241.0°0.2°
BR1C23C24H250.8°0.2°
C23C22C21H24180.0°179.8°
C23C22C21C200.0°0.0°
C22C23C24C191.0°0.5°
C23C22C21H23180.0°180.0°
C22C23C24H25179.1°180.0°
C21C22C23C240.9°0.2°
C22C21C20H23180.0°180.0°
C22C21C20C193.0°0.0°
C22C21C20H22177.0°180.0°
C23C24C19H25180.0°179.5°
C23C24C19C203.8°0.5°
C23C24C19C18177.3°179.8°
C24C23C22H24179.1°180.0°
C21C20C19C244.8°0.3°
C21C20C19H22180.0°180.0°
C21C20C19C18178.3°180.0°
C20C21C22H24179.9°179.8°
C24C19C20C18173.5°179.7°
C24C19C18C2528.8°0.3°
C24C19C18C17155.3°179.2°
C24C19C20H22175.2°179.8°
C20C19C18C25157.9°180.0°
C20C19C18C1718.1°0.6°
C19C20C21H23177.1°180.0°
C20C19C24H25176.2°180.0°
C19C18C25C17176.0°179.5°
C19C18C25C14179.0°180.0°
C19C18C17C16179.7°179.7°
C19C18C17H210.3°0.3°
C18C19C20H221.6°0.0°
C18C19C24H252.7°0.3°
C19C18C25H261.0°0.5°
C18C25C14H26180.0°179.5°
C25C18C17C163.5°0.2°
C18C25C14C13178.9°179.8°
C18C25C14C151.1°0.5°
C25C18C17H21176.5°179.7°
C17C18C25C143.0°0.5°
C18C17C16H21180.0°180.0°
C18C17C16C152.2°0.0°
C18C17C16H20177.8°179.9°
C17C18C25H26177.0°180.0°
C25C14C13O1G21.6°0.3°
C25C14C13C15177.9°179.7°
C25C14C13N5176.9°179.8°
C25C14C15C160.3°0.3°
C25C14C15H19179.7°179.8°
C17C16C15C140.2°0.0°
C17C16C15H20180.0°179.9°
C17C16C15H19179.8°180.0°
O1GC13C14N5161.5°180.0°
O1GC13C14C15156.3°180.0°
O1GC13N5C1229.3°0.0°
O1GC13N5H18150.7°179.9°
C13C14C15C16177.8°180.0°
C14C13N5C12131.9°180.0°
C13C14C15H192.3°0.0°
C13C14C25H261.1°0.2°
C14C13N5H1848.1°0.1°
C15C14C13N55.2°0.1°
C14C15C16H19180.0°180.0°
C14C15C16H20179.8°179.9°
C15C14C25H26178.9°180.0°
C13N5C12H18180.0°179.9°
C13N5C12C11115.9°179.9°
C13N5C12H173.8°60.0°
C13N5C12HOG3124.5°60.1°
C15C16C17H21177.8°180.0°
N5C12C11H17119.6°120.0°
N5C12C11HOG3119.6°120.0°
N5C12C11C1062.5°180.0°
N5C12C11HOG258.6°60.0°
N5C12C11HO2'176.4°60.0°
N5C12H17HOG3121.0°120.1°
C12C11C10O3A61.2°180.0°
C12C11C10HOG2121.1°120.0°
C12C11C10HO2'121.1°120.0°
C12C11HOG2HO2'116.7°120.0°
C12C11C10HOB259.6°60.0°
C12C11C10HOA2178.0°60.1°
C11C12H17HOG3121.1°120.0°
C11C12N5H1864.1°0.1°
O3BPBO3AO2113.4°120.0°
O3BPBO3AO1B129.2°120.0°
O3BPBO3AC10174.9°55.0°
O3BPBO2O1B129.2°120.0°
O3BPBO2C5'176.4°55.0°
O3BPBO1BH10.0°180.0°
O6C6N1C5179.9°179.9°
O6C6N1C2179.5°179.9°
O6C6C5C4179.5°179.9°
O6C6C5N70.2°0.0°
O6C6N1HN10.5°0.1°
C6N1C2HN1180.0°180.0°
C6N1C2N2179.5°180.0°
C6N1C2N30.3°0.3°
N1C6C5C40.4°0.0°
N1C6C5N7180.0°179.9°
N1C2N2N3179.7°179.7°
C2N1C6C50.4°0.0°
N1C2N3C40.0°0.6°
N1C2N2HN22179.7°0.0°
N1C2N2HN210.3°180.0°
PBO3AC10C11168.6°180.0°
O3APBO2O1B117.2°120.0°
O3APBO2C5'69.9°175.0°
PBO3AC10HOB270.6°60.0°
PBO3AC10HOA247.9°60.0°
O3APBO1BH1121.2°60.0°
O3AC10C11HOB2120.8°120.0°
O3AC10C11HOA2120.8°119.9°
C10O3APBO271.8°175.0°
C10O3APBO1B45.7°65.1°
O3AC10C11HOG259.9°60.0°
O3AC10C11HO2'177.7°60.0°
O3AC10HOB2HOA2117.7°119.9°
N2C2N3C4179.7°179.7°
N2C2N1HN10.5°0.0°
C2N2HN22HN21180.0°180.0°
C10C11HOG2HO2'116.7°120.0°
C11C10HOB2HOA2117.6°120.0°
C10C11C12H17177.9°60.0°
C10C11C12HOG357.1°60.0°
C6C5C4N7179.7°179.9°
C6C5C4N30.2°0.3°
C6C5C4N9179.5°180.0°
C6C5N7C8179.9°180.0°
C5C6N1HN1179.6°180.0°
PBO2C5'C4'103.9°180.0°
PBO2C5'H5''16.3°60.0°
PBO2C5'H5'135.8°60.0°
O2PBO1BH1121.0°60.0°
O1BPBO2C5'47.2°65.0°
C2N3C4C50.1°0.6°
C2N3C4N9179.1°179.8°
N3C2N1HN1179.7°179.7°
N3C2N2HN220.0°179.7°
N3C2N2HN21180.0°0.3°
O2C5'C4'H5''120.3°120.0°
O2C5'C4'H5'120.2°120.0°
O2C5'C4'O4'70.2°70.9°
O2C5'C4'C3'49.9°175.0°
O2C5'C4'H4'169.4°52.1°
O2C5'H5''H5'119.3°120.0°
C5C4N3N9179.2°179.6°
C4C5N7C80.2°0.1°
C5C4N9C81.0°0.0°
C5C4N9C1'178.6°180.0°
N7C5C4N3179.9°179.8°
N7C5C4N90.8°0.1°
C5N7C8N90.4°0.1°
C5N7C8H8179.6°180.0°
N3C4N9C8179.6°179.7°
N3C4N9C1'0.7°0.3°
C4N9C8N70.9°0.0°
C4N9C8C1'179.6°180.0°
C4N9C1'O4'84.7°157.1°
C4N9C1'C2'35.3°85.0°
C4N9C8H8179.1°179.9°
C4N9C1'H1'158.8°36.0°
N7C8N9H8180.0°179.9°
N7C8N9C1'178.7°179.9°
C5'C4'O4'C3'125.8°118.6°
C5'C4'O4'H4'119.9°122.9°
C5'C4'O4'C1'152.4°158.6°
C5'C4'C3'H4'119.7°122.9°
C5'C4'C3'O3'83.0°86.1°
C5'C4'C3'C2'158.7°155.7°
C5'C4'C3'H3'41.9°37.4°
C4'C5'H5''H5'119.2°120.0°
C8N9C1'O4'95.8°22.9°
C8N9C1'C2'144.3°95.0°
C8N9C1'H1'20.8°144.0°
N9C1'O4'C4'135.7°146.0°
N9C1'O4'C2'127.0°119.5°
N9C1'O4'H1'116.0°121.1°
N9C1'C2'C3'105.7°121.6°
N9C1'C2'H1'123.7°121.0°
C1'N9C8H81.3°0.0°
N9C1'C2'H2'13.4°119.7°
N9C1'C2'H6135.2°2.9°
O4'C4'C3'H4'115.1°118.5°
O4'C4'C3'O3'151.9°155.2°
O4'C4'C3'C2'33.5°37.0°
C4'O4'C1'C2'8.7°26.5°
C4'O4'C1'H1'108.4°92.9°
O4'C4'C3'H3'83.2°81.2°
O4'C4'C5'H5''169.6°169.2°
O4'C4'C5'H5'50.1°49.1°
C1'O4'C4'C3'26.6°40.0°
O4'C1'C2'C3'12.9°2.0°
O4'C1'C2'H1'117.7°119.4°
O4'C1'C2'H2'132.1°120.7°
O4'C1'C2'H6106.2°116.8°
C1'O4'C4'H4'87.7°78.5°
C4'C3'O3'C2'114.6°112.8°
C4'C3'O3'H3'124.1°123.6°
C4'C3'C2'H3'116.7°118.2°
C4'C3'C2'C1'28.0°20.9°
C4'C3'C2'H2'147.2°97.8°
C4'C3'C2'H691.1°139.6°
C3'C4'C5'H5''70.4°55.0°
C3'C4'C5'H5'170.1°65.0°
C4'C3'O3'HO3'180.0°174.1°
O3'C3'C2'H3'122.2°123.5°
O3'C3'C2'C1'149.1°139.1°
O3'C3'C2'H2'91.7°20.4°
O3'C3'C2'H630.0°102.2°
O3'C3'C4'H4'36.7°36.8°
C3'C2'C1'H2'119.1°118.7°
C3'C2'C1'H6119.1°118.8°
C3'C2'C1'H1'130.6°117.4°
C3'C2'H2'H6122.5°122.7°
C2'C3'C4'H4'81.6°81.4°
C2'C3'O3'HO3'65.4°61.4°
C1'C2'H2'H6122.5°122.6°
C1'C2'C3'H3'88.7°97.3°
HOG2C11C10HOB2179.4°60.0°
HOG2C11C10HOA260.9°179.9°
HOG2C11C12H1761.1°180.0°
HOG2C11C12HOG3178.2°60.0°
HO2'C11C10HOB261.5°180.0°
HO2'C11C10HOA257.0°60.0°
HO2'C11C12H1756.8°60.0°
HO2'C11C12HOG363.9°180.0°
H17C12N5H18176.3°119.9°
HOG3C12N5H1855.5°120.1°
H1'C1'C2'H2'110.3°1.3°
H1'C1'C2'H611.5°123.8°
H19C15C16H200.2°0.0°
H20C16C17H212.2°0.1°
H2'C2'C3'H3'30.4°144.0°
H6C2'C3'H3'152.1°21.3°
H22C20C21H233.0°0.0°
H23C21C22H240.0°0.3°
H3'C3'C4'H4'161.6°160.3°
H3'C3'O3'HO3'55.9°62.2°
H4'C4'C5'H5''49.2°67.9°
H4'C4'C5'H5'70.3°172.1°

223532

PDB entries from 2024-08-07

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