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YVY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C21C22doub1.38Å1.38ÅAromatic
C21C26sing1.38Å1.39ÅAromatic
C22C23sing1.38Å1.39ÅAromatic
C26C25doub1.38Å1.39ÅAromatic
C38C37doub1.38Å1.38ÅAromatic
C38C39sing1.38Å1.39ÅAromatic
C37C42sing1.38Å1.38ÅAromatic
C39C40doub1.38Å1.39ÅAromatic
C23C24doub1.38Å1.38ÅAromatic
C25C24sing1.38Å1.38ÅAromatic
C42C41doub1.38Å1.39ÅAromatic
C40C41sing1.38Å1.38ÅAromatic
C40C07sing1.51Å1.52Å
C24C17sing1.51Å1.55Å
C07C04sing1.53Å1.55Å
C17C15sing1.53Å1.55Å
O14C06doub1.21Å1.19Å
C04C06sing1.51Å1.54Å
C04N02sing1.46Å1.44Å
C10O09sing1.43Å1.40Å
C10C11sing1.47Å1.53Å
C06N13sing1.35Å1.47Å
N02C01sing1.35Å1.46Å
N13C15sing1.46Å1.47Å
C15C16sing1.51Å1.52Å
O09C08sing1.43Å1.41Å
C11C12trip1.17Å1.19Å
C01C05sing1.51Å1.52Å
C01O03doub1.21Å1.19Å
C08C05sing1.53Å1.53Å
C16N18sing1.35Å1.49Å
C16O19doub1.21Å1.17Å
N18C20sing1.46Å1.48Å
C29C27sing1.51Å1.54Å
C20C27sing1.51Å1.56Å
C20C28sing1.53Å1.52Å
C31C28sing1.53Å1.54Å
C31C32sing1.53Å1.52Å
C27O30doub1.21Å1.18Å
C32N33sing1.47Å1.45Å
N33C34sing1.35Å1.45Å
N35C34sing1.35Å1.46Å
C34O36doub1.22Å1.17Å
C10H102sing1.09Å1.10Å
C10H101sing1.09Å1.10Å
C15H151sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C17H171sing1.09Å1.10Å
C20H201sing1.09Å1.10Å
C21H211sing1.08Å1.08Å
C22H221sing1.08Å1.08Å
C26H261sing1.08Å1.08Å
C28H281sing1.09Å1.10Å
C28H282sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C05H051sing1.09Å1.10Å
C05H052sing1.09Å1.10Å
C07H072sing1.09Å1.10Å
C07H071sing1.09Å1.10Å
C08H082sing1.09Å1.10Å
C08H081sing1.09Å1.10Å
C12H121sing1.05Å1.06Å
C23H231sing1.08Å1.08Å
C25H251sing1.08Å1.08Å
C29H1sing1.09Å1.10Å
C29H2sing1.09Å1.10Å
C29H3sing1.09Å1.10Å
C31H311sing1.09Å1.10Å
C31H312sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C32H321sing1.09Å1.10Å
C37H371sing1.08Å1.08Å
C38H381sing1.08Å1.08Å
C39H391sing1.08Å1.08Å
C41H411sing1.08Å1.08Å
C42H421sing1.08Å1.08Å
N02H021sing0.97Å1.00Å
N13H131sing0.97Å1.00Å
N18H181sing0.97Å1.00Å
N33H331sing0.97Å1.00Å
N35H352sing0.97Å1.00Å
N35H351sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C22C21C26119.2°120.0°
C21C22C23120.0°120.0°
C22C21H211120.4°120.0°
C21C22H221120.0°120.0°
C21C26C25120.3°120.0°
C26C21H211120.4°120.0°
C21C26H261119.9°120.0°
C22C23C24120.9°120.0°
C23C22H221120.0°120.0°
C22C23H231119.5°120.0°
C26C25C24120.6°120.0°
C25C26H261119.9°120.0°
C26C25H251119.7°120.0°
C37C38C39120.0°120.0°
C38C37C42119.9°120.0°
C38C37H371120.1°120.0°
C37C38H381120.0°120.0°
C38C39C40120.1°120.0°
C39C38H381120.0°120.0°
C38C39H391119.9°120.1°
C37C42C41120.1°120.0°
C42C37H371120.0°120.0°
C37C42H421119.9°120.0°
C39C40C41119.7°120.0°
C39C40C07120.5°120.0°
C40C39H391119.9°120.0°
C23C24C25119.0°120.0°
C23C24C17120.4°120.0°
C24C23H231119.5°120.0°
C25C24C17120.7°120.0°
C24C25H251119.7°120.0°
C42C41C40120.2°120.0°
C42C41H411119.9°120.0°
C41C42H421120.0°120.0°
C41C40C07119.7°120.0°
C40C41H411119.9°120.0°
C40C07C04116.4°109.5°
C40C07H072107.7°109.4°
C40C07H071107.7°109.5°
C24C17C15113.2°109.4°
C24C17H172108.6°109.5°
C24C17H171108.5°109.5°
C07C04C0697.7°109.5°
C07C04N02114.2°109.5°
C07C04H041109.1°109.4°
C04C07H072107.7°109.5°
C04C07H071107.7°109.5°
C17C15N13107.2°109.5°
C17C15C16112.5°109.4°
C17C15H151106.4°109.5°
C15C17H172108.5°109.5°
C15C17H171108.5°109.5°
O14C06C04118.5°120.0°
O14C06N13120.7°120.0°
C06C04N02115.2°109.5°
C04C06N13120.7°120.0°
C06C04H041109.2°109.5°
C04N02C01114.1°120.0°
N02C04H041110.7°109.5°
C04N02H021122.9°120.1°
O09C10C11109.8°109.5°
C10O09C08113.5°114.0°
O09C10H102109.4°109.5°
O09C10H101109.4°109.5°
C10C11C12179.4°180.0°
C11C10H102109.4°109.5°
C11C10H101109.4°109.5°
C06N13C15122.0°120.0°
C06N13H131119.0°120.0°
N02C01C05121.7°120.0°
N02C01O03120.8°120.0°
C01N02H021122.9°120.0°
N13C15C16116.2°109.5°
N13C15H151107.3°109.5°
C15N13H131119.0°120.0°
C15C16N18119.8°120.0°
C15C16O19113.4°120.0°
C16C15H151106.7°109.5°
O09C08C05111.7°109.5°
O09C08H082108.9°109.5°
O09C08H081108.9°109.5°
C11C12H121180.0°179.9°
C05C01O03117.5°120.0°
C01C05C08104.2°109.5°
C01C05H051110.8°109.5°
C01C05H052110.8°109.5°
C08C05H051110.7°109.5°
C08C05H052110.8°109.4°
C05C08H082108.9°109.5°
C05C08H081108.9°109.4°
N18C16O19126.7°120.0°
C16N18C20125.7°120.0°
C16N18H181117.2°120.0°
N18C20C27106.2°109.5°
N18C20C28106.5°109.5°
N18C20H201107.5°109.5°
C20N18H181117.2°120.0°
C29C27C20120.9°120.0°
C29C27O30117.3°120.0°
C27C29H1109.5°109.5°
C27C29H2109.4°109.4°
C27C29H3109.5°109.4°
C27C20C28122.3°109.5°
C20C27O30121.6°120.0°
C27C20H201106.6°109.4°
C20C28C31103.3°109.5°
C28C20H201107.0°109.5°
C20C28H281111.0°109.4°
C20C28H282111.0°109.5°
C28C31C32107.1°109.5°
C31C28H281111.0°109.5°
C31C28H282111.0°109.5°
C28C31H311110.1°109.5°
C28C31H312110.0°109.5°
C31C32N33107.7°109.5°
C32C31H311110.1°109.4°
C32C31H312110.1°109.5°
C31C32H322109.9°109.5°
C31C32H321109.9°109.5°
C32N33C34119.5°120.0°
N33C32H322109.9°109.5°
N33C32H321109.9°109.5°
C32N33H331120.3°120.0°
N33C34N35121.3°120.0°
N33C34O36119.2°120.0°
C34N33H331120.2°120.0°
N35C34O36119.5°120.0°
C34N35H352120.0°120.0°
C34N35H351120.0°120.0°
H102C10H101109.5°109.4°
H172C17H171109.5°109.5°
H281C28H282109.5°109.5°
H051C05H052109.5°109.5°
H072C07H071109.5°109.5°
H082C08H081109.5°109.5°
H1C29H2109.5°109.5°
H1C29H3109.5°109.5°
H2C29H3109.5°109.5°
H311C31H312109.5°109.5°
H322C32H321109.5°109.4°
H352N35H351120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C22C21C26H211180.0°179.6°
C21C22C23H221180.0°179.9°
C22C21C26C250.0°0.4°
C21C22C23C240.4°0.0°
C22C21C26H261179.9°179.7°
C21C22C23H231179.6°180.0°
C26C21C22C230.0°0.4°
C21C26C25H261180.0°179.9°
C21C26C25C240.4°0.1°
C26C21C22H221179.9°179.7°
C21C26C25H251179.6°179.9°
C22C23C24H231180.0°180.0°
C22C23C24C250.8°0.3°
C22C23C24C17179.6°180.0°
C23C22C21H211180.0°180.0°
C26C25C24C230.8°0.3°
C26C25C24H251180.0°180.0°
C26C25C24C17179.6°180.0°
C25C26C21H211180.0°180.0°
C37C38C39H381180.0°179.7°
C38C37C42H371180.0°179.8°
C37C38C39C400.8°0.0°
C38C37C42C410.0°0.5°
C37C38C39H391179.2°180.0°
C38C37C42H421180.0°179.9°
C39C38C37C420.5°0.3°
C38C39C40H391180.0°180.0°
C38C39C40C410.8°0.0°
C38C39C40C07178.6°179.7°
C39C38C37H371179.5°180.0°
C37C42C41H421180.0°179.5°
C37C42C41C400.0°0.5°
C42C37C38H381179.5°180.0°
C37C42C41H411180.0°179.5°
C39C40C41C420.3°0.3°
C39C40C41C07179.4°179.7°
C39C40C07C04107.6°89.7°
C39C40C07H07213.4°30.3°
C39C40C07H071131.4°150.3°
C40C39C38H381179.2°179.7°
C39C40C41H411179.6°179.7°
C23C24C25C17178.8°179.7°
C23C24C17C1575.2°90.0°
C23C24C17H17245.4°150.0°
C23C24C17H171164.3°30.0°
C24C23C22H221179.5°179.9°
C23C24C25H251179.2°179.7°
C25C24C17C15103.6°90.3°
C25C24C17H172135.9°29.7°
C25C24C17H17117.0°149.7°
C24C25C26H261179.6°180.0°
C25C24C23H231179.2°179.7°
C42C41C40H411180.0°180.0°
C42C41C40C07179.0°180.0°
C41C42C37H371180.0°179.8°
C41C40C07C0471.7°90.0°
C41C40C07H072167.3°150.0°
C41C40C07H07149.3°30.0°
C41C40C39H391179.3°180.0°
C40C41C42H421180.0°179.9°
C40C07C04H072121.0°119.9°
C40C07C04H071121.0°120.1°
C40C07C04C06176.9°175.0°
C40C07C04N0261.0°65.0°
C40C07C04H04163.4°55.0°
C40C07H072H071116.9°120.0°
C07C40C39H3911.4°0.3°
C07C40C41H4111.0°0.0°
C24C17C15H172120.6°120.0°
C24C17C15H171120.5°120.0°
C24C17C15N1352.2°65.0°
C24C17C15C16178.8°175.0°
C24C17C15H15162.3°55.0°
C24C17H172H171118.3°120.0°
C17C24C23H2310.4°0.0°
C17C24C25H2510.4°0.0°
C07C04C06O1486.5°120.0°
C07C04C06N02121.4°120.0°
C07C04C06H041113.4°120.0°
C07C04N02H041123.6°120.0°
C07C04C06N1389.8°60.0°
C07C04N02C01139.9°85.1°
C04C07H072H071116.9°120.0°
C07C04N02H02140.1°95.1°
C17C15N13C06119.6°85.0°
C17C15N13C16126.8°120.0°
C17C15N13H151113.9°120.0°
C17C15C16H151116.3°120.0°
C17C15C16N1852.2°60.0°
C17C15C16O19130.7°120.0°
C15C17H172H171118.3°120.0°
C17C15N13H13160.3°95.0°
O14C06C04N13176.2°180.0°
O14C06C04N0234.9°0.1°
O14C06N13C151.2°0.0°
O14C06C04H041160.2°120.0°
O14C06N13H131178.8°180.0°
C06C04N02H041124.5°120.0°
C06C04N02C01108.1°155.0°
C04C06N13C15174.9°180.0°
C06C04C07H07262.1°65.0°
C06C04C07H07155.9°55.0°
C06C04N02H02171.9°24.9°
C04C06N13H1315.0°0.0°
N02C04C06N13148.8°179.9°
C04N02C01H021180.0°179.9°
C04N02C01C05178.9°180.0°
C04N02C01O030.3°0.1°
N02C04C07H07260.0°54.9°
N02C04C07H071178.1°175.0°
O09C10C11H102120.0°120.0°
O09C10C11H101120.1°120.0°
O09C10C11C12158.1°45.2°
C10O09C08C05152.4°180.0°
O09C10H102H101119.9°120.0°
C10O09C08H08287.2°60.0°
C10O09C08H08132.1°60.0°
C11C10O09C0864.5°179.9°
C11C10H102H101119.8°120.0°
C10C11C12H12112.3°149.5°
C06N13C15H131180.0°180.0°
C06N13C15C16113.6°155.0°
C06N13C15H1515.7°35.0°
N13C06C04H04123.6°60.0°
N02C01C05O03179.2°179.9°
N02C01C05C08103.3°180.0°
C01N02C04H04116.4°34.9°
N02C01C05H05115.8°59.9°
N02C01C05H052137.5°60.1°
N13C15C16H151119.6°120.0°
N13C15C16N18176.3°180.0°
N13C15C16O196.6°0.0°
N13C15C17H172172.8°175.0°
N13C15C17H17168.3°55.0°
C15C16N18O19176.6°180.0°
C15C16N18C20175.5°180.0°
C16C15C17H17258.2°55.0°
C16C15C17H17160.6°65.0°
C16C15N13H13166.5°25.0°
C15C16N18H1814.6°0.0°
O09C08C05C0118.2°180.0°
O09C08C05H082120.3°120.0°
O09C08C05H081120.3°120.0°
C08O09C10H102175.5°60.0°
C08O09C10H10155.6°60.0°
O09C08C05H051101.0°60.0°
O09C08C05H052137.4°60.0°
O09C08H082H081119.0°120.0°
C12C11C10H10281.8°74.8°
C12C11C10H10138.1°165.2°
C01C05C08H051119.2°120.0°
C01C05C08H052119.2°120.0°
C01C05H051H052122.4°120.0°
C01C05C08H082102.1°60.0°
C01C05C08H081138.6°60.0°
C05C01N02H0211.1°0.1°
O03C01C05C0875.9°0.0°
O03C01C05H051165.0°120.0°
O03C01C05H05243.3°120.0°
O03C01N02H021179.7°180.0°
C08C05H051H052122.4°120.0°
C05C08H082H081119.0°120.0°
C16N18C20H181180.0°180.0°
C16N18C20C2777.9°85.0°
C16N18C20C2853.9°155.0°
N18C16C15H15164.1°60.0°
C16N18C20H201168.3°34.9°
O19C16N18C201.1°0.0°
O19C16C15H151113.0°120.0°
O19C16N18H181178.8°180.0°
N18C20C27C298.3°165.0°
N18C20C27C28122.2°120.0°
N18C20C27H201114.4°120.0°
N18C20C28H201114.7°120.0°
N18C20C28C3183.8°65.0°
N18C20C27O30178.1°15.1°
N18C20C28H28135.2°55.0°
N18C20C28H282157.2°175.0°
C29C27C20O30173.7°179.9°
C29C27C20C28130.5°75.0°
C29C27C20H201106.2°45.0°
C27C29H1H2120.0°120.0°
C27C29H1H3120.0°120.0°
C27C29H2H3120.0°119.9°
C27C20C28H201123.2°120.0°
C27C20C28C31154.1°175.0°
C27C20C28H28186.9°65.0°
C27C20C28H28235.0°55.0°
C20C27C29H1173.9°60.0°
C20C27C29H266.1°180.0°
C20C27C29H353.9°60.0°
C27C20N18H181102.1°95.0°
C20C28C31H281119.0°120.0°
C20C28C31H282119.0°120.0°
C20C28C31C32171.9°180.0°
C28C20C27O3055.8°105.0°
C20C28H281H282122.9°120.0°
C20C28C31H31152.3°60.0°
C20C28C31H31268.5°60.0°
C28C20N18H181126.1°25.0°
C28C31C32H311119.6°120.0°
C28C31C32H312119.6°120.0°
C28C31C32N3384.2°180.0°
C31C28C20H20130.9°55.0°
C31C28H281H282122.9°120.0°
C28C31H311H312121.1°120.0°
C28C31C32H322156.1°60.0°
C28C31C32H32135.5°59.9°
C31C32N33H322119.7°120.0°
C31C32N33H321119.7°120.1°
C31C32N33C34166.2°180.0°
C32C31C28H28169.1°60.0°
C32C31C28H28252.9°60.0°
C32C31H311H312121.1°120.0°
C31C32H322H321120.8°120.0°
C31C32N33H33113.8°0.0°
O30C27C20H20167.5°135.0°
O30C27C29H10.0°119.9°
O30C27C29H2120.0°0.0°
O30C27C29H3120.0°120.0°
C32N33C34H331180.0°180.0°
C32N33C34N350.1°180.0°
C32N33C34O36177.9°0.0°
N33C32C31H31135.4°60.0°
N33C32C31H312156.2°60.0°
N33C32H322H321120.8°120.0°
N33C34N35O36178.0°180.0°
C34N33C32H32246.5°60.0°
C34N33C32H32174.1°59.9°
N33C34N35H352177.9°180.0°
N33C34N35H3512.0°0.0°
N35C34N33H331179.9°0.0°
C34N35H352H351180.0°179.9°
O36C34N33H3312.1°180.0°
O36C34N35H3520.0°0.0°
O36C34N35H351180.0°180.0°
H151C15C17H17258.3°65.0°
H151C15C17H171177.1°175.0°
H151C15N13H131174.3°145.0°
H201C20C28H281149.9°175.1°
H201C20C28H28288.1°65.0°
H201C20N18H18111.7°145.0°
H211C21C22H2210.1°0.1°
H211C21C26H2610.1°0.0°
H221C22C23H2310.5°0.0°
H261C26C25H2510.5°0.0°
H281C28C31H311171.3°180.0°
H281C28C31H31250.5°60.0°
H282C28C31H31166.7°59.9°
H282C28C31H312172.5°180.0°
H041C04C07H072175.6°175.0°
H041C04C07H07157.6°65.0°
H041C04N02H021163.7°145.0°
H051C05C08H082138.7°NaN°
H051C05C08H08119.4°60.0°
H052C05C08H08217.0°60.0°
H052C05C08H081102.3°180.0°
H1C29H2H3120.0°120.1°
H311C31C32H32284.3°180.0°
H311C31C32H321155.2°60.0°
H312C31C32H32236.5°60.0°
H312C31C32H32184.1°179.9°
H322C32N33H331133.5°120.0°
H321C32N33H331105.9°120.1°
H371C37C38H3810.4°0.3°
H371C37C42H4210.0°0.3°
H381C38C39H3910.8°0.3°
H411C41C42H4210.0°0.0°

222926

PDB entries from 2024-07-24

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