Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

YVV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C25C24doub1.38Å1.53ÅAromatic
C25C26sing1.38Å1.53ÅAromatic
C24C29sing1.38Å1.52ÅAromatic
C26C27doub1.38Å1.53ÅAromatic
C29C28doub1.38Å1.53ÅAromatic
C27C28sing1.38Å1.53ÅAromatic
C27C05sing1.51Å1.53Å
C32C36sing1.51Å1.56Å
C32C30sing1.53Å1.51Å
C36C37doub1.38Å1.53ÅAromatic
C36C35sing1.38Å1.52ÅAromatic
C37C38sing1.38Å1.54ÅAromatic
C35C34doub1.38Å1.54ÅAromatic
C05C04sing1.53Å1.53Å
C04N02sing1.46Å1.42Å
C04C18sing1.51Å1.55Å
C38C33doub1.38Å1.53ÅAromatic
C34C33sing1.38Å1.53ÅAromatic
N02C01sing1.35Å1.47Å
O03C01doub1.21Å1.19Å
C01C30sing1.51Å1.55Å
C30N31sing1.46Å1.45Å
N06C18sing1.35Å1.47Å
N06C07sing1.46Å1.48Å
N31C39sing1.35Å1.47Å
C18O19doub1.21Å1.19Å
C13C07sing1.53Å1.54Å
C13C14sing1.53Å1.55Å
O12C10doub1.21Å1.19Å
C08C07sing1.53Å1.50Å
C08C09sing1.53Å1.62Å
C14C15sing1.51Å1.55Å
C39C40sing1.51Å1.55Å
C39O41doub1.21Å1.18Å
C09C10sing1.51Å1.44Å
C09C23sing1.55Å1.55Å
C10N11sing1.34Å1.52Å
C15O17doub1.21Å1.20Å
C15O16sing1.34Å1.42Å
C40C42sing1.53Å1.54Å
C44C45sing1.47Å1.54Å
C44O43sing1.43Å1.40Å
C46C45trip1.17Å1.18Å
O16C20sing1.45Å1.41Å
O43C42sing1.43Å1.40Å
C23C22sing1.54Å1.53Å
N11C22sing1.47Å1.45Å
C20C21sing1.53Å1.54Å
C13H1sing1.09Å1.10Å
C13H131sing1.09Å1.10Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C21H211sing1.09Å1.10Å
C21H212sing1.09Å1.10Å
C21H213sing1.09Å1.10Å
C22H222sing1.09Å1.10Å
C22H221sing1.09Å1.10Å
C24H241sing1.08Å1.08Å
C26H261sing1.08Å1.08Å
C28H281sing1.08Å1.08Å
C04H041sing1.09Å1.10Å
C05H052sing1.09Å1.10Å
C05H051sing1.09Å1.10Å
C07H071sing1.09Å1.10Å
C08H082sing1.09Å1.10Å
C08H081sing1.09Å1.10Å
C09H091sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C23H232sing1.09Å1.10Å
C23H231sing1.09Å1.10Å
C25H251sing1.08Å1.08Å
C29H291sing1.08Å1.08Å
C30H301sing1.09Å1.10Å
C32H321sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C33H331sing1.08Å1.08Å
C34H341sing1.08Å1.08Å
C35H351sing1.08Å1.08Å
C37H371sing1.08Å1.08Å
C38H381sing1.08Å1.08Å
C40H402sing1.09Å1.10Å
C40H401sing1.09Å1.10Å
C42H422sing1.09Å1.10Å
C42H421sing1.09Å1.10Å
C44H442sing1.09Å1.10Å
C44H441sing1.09Å1.10Å
C46H461sing1.05Å1.06Å
N02H021sing0.97Å1.00Å
N06H061sing0.97Å1.00Å
N11H111sing0.97Å1.00Å
N31H311sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C24C25C26120.0°120.0°
C25C24C29120.4°120.0°
C25C24H241119.8°120.0°
C24C25H251120.0°120.0°
C25C26C27119.3°120.0°
C25C26H261120.3°120.0°
C26C25H251120.0°120.0°
C24C29C28119.9°120.0°
C29C24H241119.8°120.0°
C24C29H291120.1°120.0°
C26C27C28120.7°120.0°
C26C27C05121.0°120.0°
C27C26H261120.4°120.0°
C29C28C27119.7°120.0°
C29C28H281120.1°120.0°
C28C29H291120.1°120.1°
C28C27C05118.3°120.0°
C27C28H281120.2°120.0°
C27C05C04112.9°109.5°
C27C05H052108.6°109.4°
C27C05H051108.6°109.5°
C36C32C30107.8°109.4°
C32C36C37120.0°120.0°
C32C36C35118.8°120.0°
C36C32H321109.9°109.5°
C36C32H322109.9°109.5°
C32C30C01108.9°109.4°
C32C30N31109.7°109.5°
C32C30H301110.4°109.5°
C30C32H321109.9°109.5°
C30C32H322109.9°109.4°
C37C36C35121.1°119.9°
C36C37C38119.7°120.0°
C36C37H371120.1°119.9°
C36C35C34119.2°120.0°
C36C35H351120.5°120.0°
C37C38C33119.5°120.0°
C38C37H371120.1°120.0°
C37C38H381120.2°120.0°
C35C34C33120.0°120.0°
C35C34H341120.0°120.0°
C34C35H351120.4°120.0°
C05C04N02114.7°109.4°
C05C04C18100.6°109.5°
C05C04H041109.6°109.5°
C04C05H052108.6°109.5°
C04C05H051108.6°109.5°
N02C04C18111.0°109.5°
C04N02C01116.3°120.0°
N02C04H041111.1°109.5°
C04N02H021121.8°120.0°
C04C18N06118.5°120.0°
C04C18O19120.0°120.0°
C18C04H041109.3°109.5°
C38C33C34120.5°120.0°
C38C33H331119.8°120.0°
C33C38H381120.3°120.0°
C34C33H331119.8°120.1°
C33C34H341120.0°120.0°
N02C01O03119.5°120.0°
N02C01C30121.5°120.0°
C01N02H021121.9°120.0°
O03C01C30119.1°120.0°
C01C30N31106.6°109.5°
C01C30H301109.9°109.4°
C30N31C39123.5°120.0°
N31C30H301111.2°109.5°
C30N31H311118.3°120.0°
C18N06C07121.7°120.0°
N06C18O19121.4°120.0°
C18N06H061119.1°120.0°
N06C07C13101.6°109.5°
N06C07C08110.7°109.5°
N06C07H071109.7°109.5°
C07N06H061119.1°120.0°
N31C39C40117.4°120.0°
N31C39O41122.2°120.1°
C39N31H311118.2°120.1°
C07C13C14110.6°109.5°
C13C07C08116.2°109.5°
C07C13H1109.2°109.5°
C07C13H131109.2°109.4°
C13C07H071108.9°109.5°
C13C14C15113.6°109.5°
C14C13H1109.2°109.5°
C14C13H131109.2°109.5°
C13C14H142108.4°109.5°
C13C14H141108.4°109.5°
O12C10C09123.7°124.9°
O12C10N11127.6°124.9°
C07C08C09109.1°109.4°
C08C07H071109.4°109.4°
C07C08H082109.5°109.5°
C07C08H081109.6°109.5°
C08C09C10105.3°110.5°
C08C09C23109.2°110.5°
C09C08H082109.6°109.5°
C09C08H081109.6°109.4°
C08C09H091111.5°110.4°
C14C15O17120.4°120.0°
C14C15O16119.5°120.0°
C15C14H142108.4°109.5°
C15C14H141108.5°109.5°
C40C39O41120.4°119.9°
C39C40C42112.2°109.5°
C39C40H402108.8°109.5°
C39C40H401108.8°109.5°
C10C09C23103.5°104.2°
C09C10N11108.7°110.2°
C10C09H091114.4°110.5°
C09C23C22104.1°101.7°
C23C09H091112.5°110.6°
C09C23H232110.8°111.0°
C09C23H231110.8°111.0°
C10N11C22107.7°111.3°
C10N11H111126.1°124.4°
O17C15O16120.1°120.0°
C15O16C20117.2°117.0°
C40C42O43110.9°109.4°
C42C40H402108.8°109.5°
C42C40H401108.8°109.5°
C40C42H422109.1°109.5°
C40C42H421109.1°109.5°
C45C44O43110.6°109.5°
C44C45C46178.8°180.0°
C45C44H442109.2°109.5°
C45C44H441109.2°109.5°
C44O43C42114.5°114.0°
O43C44H442109.2°109.5°
O43C44H441109.2°109.4°
C45C46H461180.0°180.0°
O16C20C21110.4°109.5°
O16C20H201109.3°109.4°
O16C20H202109.2°109.4°
O43C42H422109.1°109.5°
O43C42H421109.1°109.5°
C23C22N11103.8°105.5°
C23C22H222110.9°110.3°
C23C22H221110.9°110.2°
C22C23H232110.8°111.0°
C22C23H231110.8°111.0°
N11C22H222110.9°110.2°
N11C22H221110.9°110.3°
C22N11H111126.1°124.4°
C21C20H201109.2°109.5°
C21C20H202109.2°109.5°
C20C21H211109.5°109.5°
C20C21H212109.5°109.5°
C20C21H213109.5°109.5°
H1C13H131109.5°109.5°
H201C20H202109.5°109.5°
H211C21H212109.5°109.5°
H211C21H213109.4°109.5°
H212C21H213109.5°109.5°
H222C22H221109.5°110.2°
H052C05H051109.5°109.5°
H082C08H081109.4°109.5°
H142C14H141109.5°109.4°
H232C23H231109.5°110.9°
H321C32H322109.5°109.5°
H402C40H401109.5°109.5°
H422C42H421109.5°109.5°
H442C44H441109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C24C25C26H251180.0°180.0°
C25C24C29H241180.0°179.8°
C24C25C26C270.4°0.1°
C25C24C29C280.2°0.2°
C24C25C26H261179.6°179.7°
C25C24C29H291179.8°179.7°
C26C25C24C290.2°0.1°
C25C26C27H261180.0°179.8°
C25C26C27C280.6°0.2°
C25C26C27C05179.8°179.7°
C26C25C24H241179.8°179.7°
C24C29C28H291180.0°179.9°
C24C29C28C270.4°0.5°
C24C29C28H281179.6°180.0°
C29C24C25H251179.8°180.0°
C26C27C28C290.6°0.5°
C26C27C28C05179.2°179.9°
C26C27C05C0418.9°90.0°
C26C27C28H281179.4°180.0°
C26C27C05H052101.6°30.0°
C26C27C05H051139.4°150.0°
C27C26C25H251179.6°179.9°
C29C28C27H281180.0°179.5°
C29C28C27C05179.8°179.5°
C28C29C24H241179.8°180.0°
C28C27C05C04161.9°90.0°
C28C27C26H261179.4°179.9°
C28C27C05H05277.6°150.0°
C28C27C05H05141.4°30.1°
C27C28C29H291179.6°179.5°
C27C05C04H052120.5°120.0°
C27C05C04H051120.5°120.0°
C27C05C04N0263.9°65.0°
C27C05C04C18177.0°175.0°
C05C27C26H2610.2°0.0°
C05C27C28H2810.2°0.1°
C27C05C04H04161.9°55.0°
C27C05H052H051118.4°120.0°
C36C32C30H321119.7°120.0°
C36C32C30H322119.7°119.9°
C32C36C37C35179.4°180.0°
C32C36C37C38179.7°179.7°
C32C36C35C34179.9°180.0°
C36C32C30C01168.5°175.0°
C36C32C30N3175.1°65.0°
C36C32C30H30147.8°55.0°
C36C32H321H322120.8°120.0°
C32C36C35H3510.1°0.0°
C32C36C37H3710.3°0.0°
C30C32C36C3787.3°90.0°
C30C32C36C3592.2°90.0°
C32C30C01N0280.5°60.0°
C32C30C01O0399.7°120.0°
C32C30C01N31118.3°120.0°
C32C30C01H301121.0°120.0°
C32C30N31H301122.4°120.1°
C32C30N31C39119.0°85.1°
C30C32H321H322120.8°120.0°
C32C30N31H31160.9°95.0°
C36C37C38H371180.0°179.7°
C37C36C35C340.4°0.0°
C36C37C38C330.8°0.6°
C37C36C32H32132.4°30.0°
C37C36C32H322153.0°150.0°
C37C36C35H351179.5°180.0°
C36C37C38H381179.2°180.0°
C35C36C37C380.8°0.3°
C36C35C34H351180.0°180.0°
C36C35C34C330.1°0.0°
C35C36C32H321148.1°150.0°
C35C36C32H32227.6°29.9°
C36C35C34H341179.9°180.0°
C35C36C37H371179.2°180.0°
C37C38C33H381180.0°179.4°
C37C38C33C340.5°0.6°
C37C38C33H331179.5°179.7°
C35C34C33C380.1°0.3°
C35C34C33H341180.0°180.0°
C35C34C33H331179.9°180.0°
C05C04N02C18113.1°119.9°
C05C04N02H041125.0°120.0°
C05C04C18H041115.3°120.0°
C05C04N02C01177.8°85.0°
C05C04C18N0693.8°60.0°
C05C04C18O1983.0°120.0°
C04C05H052H051118.4°120.0°
C05C04N02H0212.2°95.0°
N02C04C18H041122.9°120.1°
C04N02C01H021180.0°180.0°
C04N02C01O031.4°0.0°
C04N02C01C30178.8°180.0°
N02C04C18N06144.4°180.0°
N02C04C18O1938.8°0.1°
N02C04C05H052175.6°55.0°
N02C04C05H05156.6°175.0°
C18C04N02C0164.6°155.0°
C04C18N06O19176.8°180.0°
C04C18N06C07178.0°175.0°
C18C04C05H05256.5°65.0°
C18C04C05H05162.5°55.0°
C18C04N02H021115.3°24.9°
C04C18N06H0611.9°5.0°
C38C33C34H331180.0°179.8°
C38C33C34H341179.9°179.7°
C33C38C37H371179.2°179.7°
C33C34C35H351179.9°180.0°
C34C33C38H381179.5°179.9°
N02C01O03C30179.8°180.0°
N02C01C30N31161.1°180.0°
C01N02C04H04157.2°34.9°
N02C01C30H30140.5°60.0°
O03C01C30N3118.7°0.0°
O03C01C30H301139.3°120.0°
O03C01N02H021178.6°180.0°
C01C30N31H301119.8°120.0°
C01C30N31C39123.1°155.0°
C01C30C32H32171.7°55.0°
C01C30C32H32248.8°65.0°
C30C01N02H0211.2°0.0°
C01C30N31H31156.9°25.0°
C30N31C39H311180.0°180.0°
C30N31C39C40179.6°180.0°
C30N31C39O410.7°0.0°
N31C30C32H32144.6°175.0°
N31C30C32H322165.2°54.9°
C18N06C07H061180.0°180.0°
C18N06C07C13121.6°152.0°
C18N06C07C08114.4°87.9°
N06C18C04H04121.5°60.0°
C18N06C07H0716.4°32.0°
C07N06C18O191.2°5.1°
N06C07C13C08120.2°120.0°
N06C07C13H071115.7°120.0°
N06C07C13C1470.1°65.0°
N06C07C08H071121.0°120.0°
N06C07C08C0976.5°174.0°
N06C07C13H1169.7°175.0°
N06C07C13H13150.0°55.0°
N06C07C08H08243.5°54.1°
N06C07C08H081163.6°66.0°
N31C39C40O41179.7°180.0°
N31C39C40C42165.5°180.0°
C39N31C30H3013.4°35.0°
N31C39C40H40245.1°60.0°
N31C39C40H40174.0°60.0°
O19C18C04H041161.7°120.0°
O19C18N06H061178.7°175.0°
C07C13C14H1120.2°120.0°
C07C13C14H131120.1°120.0°
C13C07C08H071123.8°120.0°
C13C07C08C09168.3°65.9°
C07C13C14C15139.3°180.0°
C07C13H1H131119.5°120.0°
C13C07C08H08271.7°174.1°
C13C07C08H08148.3°54.0°
C07C13C14H142100.1°59.9°
C07C13C14H14118.7°60.0°
C13C07N06H06158.4°28.0°
C14C13C07C08169.7°175.0°
C13C14C15H142120.6°120.0°
C13C14C15H141120.6°120.0°
C13C14C15O172.5°0.0°
C13C14C15O16176.3°180.0°
C14C13H1H131119.5°120.0°
C14C13C07H07145.6°55.0°
C13C14H142H141118.1°120.0°
O12C10C09C0845.3°77.9°
O12C10C09N11179.6°179.8°
O12C10C09C23159.9°163.5°
O12C10N11C22179.1°179.8°
O12C10C09H09177.4°44.7°
O12C10N11H1110.9°0.1°
C07C08C09H082119.9°120.0°
C07C08C09H081120.0°120.0°
C07C08C09C10169.1°65.5°
C07C08C09C2358.5°179.8°
C08C07C13H149.5°55.0°
C08C07C13H13170.2°65.0°
C07C08H082H081120.1°120.0°
C07C08C09H09166.4°57.1°
C08C07N06H06165.7°92.1°
C08C09C10C23114.6°118.7°
C08C09C10H091122.7°122.6°
C08C09C23H091124.3°122.6°
C08C09C10N11134.4°102.4°
C08C09C23C22144.8°93.9°
C09C08C07H07144.5°54.1°
C09C08H082H081120.2°120.0°
C08C09C23H23225.7°148.0°
C08C09C23H23196.0°24.2°
C14C15O17O16178.8°180.0°
C14C15O16C20110.5°180.0°
C15C14C13H119.1°60.0°
C15C14C13H131100.5°60.0°
C15C14H142H141118.1°120.0°
C39C40C42H402120.4°120.0°
C39C40C42H401120.4°120.0°
C39C40C42O4349.5°180.0°
C39C40H402H401118.7°120.0°
C39C40C42H422169.7°60.0°
C39C40C42H42170.7°60.0°
C40C39N31H3110.4°0.0°
O41C39C40C4214.1°0.0°
O41C39C40H402134.5°120.0°
O41C39C40H401106.3°120.0°
O41C39N31H311179.2°180.0°
C10C09C23H091123.9°118.7°
C10C09C23C2233.1°24.8°
C09C10N11C221.3°0.4°
C10C09C08H08270.9°54.5°
C10C09C08H08149.1°174.6°
C10C09C23H23286.0°93.3°
C10C09C23H231152.2°142.9°
C09C10N11H111178.7°179.6°
C23C09C10N1119.8°16.3°
C09C23C22H232119.2°118.1°
C09C23C22H231119.1°118.1°
C09C23C22N1133.9°25.5°
C09C23C22H222153.0°93.6°
C09C23C22H22185.1°144.5°
C23C09C08H082178.5°60.2°
C23C09C08H08161.4°59.8°
C09C23H232H231122.5°123.8°
C10N11C22C2322.1°17.1°
C10N11C22H111180.0°179.9°
C10N11C22H222141.2°102.0°
C10N11C22H22196.9°136.1°
N11C10C09H091102.9°135.1°
O17C15O16C2070.7°0.0°
O17C15C14H142123.0°120.0°
O17C15C14H141118.2°120.0°
C15O16C20C21136.5°180.0°
C15O16C20H20116.3°60.0°
C15O16C20H202103.4°60.0°
O16C15C14H14255.7°60.0°
O16C15C14H14163.0°60.0°
C40C42O43C4480.3°180.0°
C40C42O43H422120.2°120.0°
C40C42O43H421120.2°120.0°
C42C40H402H401118.8°120.0°
C40C42H422H421119.4°120.0°
C45C44O43H442120.2°120.1°
C45C44O43H441120.2°120.0°
C45C44O43C42168.1°180.0°
C45C44H442H441119.5°120.0°
C44C45C46H461173.7°144.4°
O43C44C45C46137.3°15.6°
C44O43C42H42239.9°60.1°
C44O43C42H421159.5°60.0°
O43C44H442H441119.5°120.0°
C46C45C44H442102.6°104.5°
C46C45C44H44117.1°135.6°
O16C20C21H201120.2°120.0°
O16C20C21H202120.2°120.0°
O16C20H201H202119.6°119.9°
O16C20C21H211180.0°180.0°
O16C20C21H21260.0°60.0°
O16C20C21H21360.0°60.0°
O43C42C40H40270.9°60.0°
O43C42C40H401169.9°60.0°
O43C42H422H421119.3°120.0°
C42O43C44H44247.9°59.9°
C42O43C44H44171.7°60.0°
C23C22N11H222119.1°119.1°
C23C22N11H221119.1°119.0°
C23C22H222H221122.7°122.0°
C22C23C09H09190.8°143.5°
C22C23H232H231122.5°123.8°
C23C22N11H111157.8°163.0°
N11C22H222H221122.6°122.0°
N11C22C23H23285.2°92.6°
N11C22C23H231153.1°143.5°
C21C20H201H202119.6°120.0°
C20C21H211H212120.0°120.0°
C20C21H211H213120.0°120.0°
C20C21H212H213120.0°120.0°
H1C13C07H07174.6°65.0°
H1C13C14H142139.7°180.0°
H1C13C14H141101.5°60.0°
H131C13C07H071165.8°175.0°
H131C13C14H14220.1°60.0°
H131C13C14H141138.8°180.0°
H201C20C21H21159.8°60.0°
H201C20C21H212179.8°60.0°
H201C20C21H21360.1°180.0°
H202C20C21H21159.9°60.0°
H202C20C21H21260.2°180.0°
H202C20C21H213179.8°60.0°
H211C21H212H213119.9°120.0°
H222C22C23H23233.9°148.3°
H222C22C23H23187.8°24.5°
H222C22N11H11138.7°77.9°
H221C22C23H232155.7°26.4°
H221C22C23H23134.0°97.4°
H221C22N11H11183.1°44.0°
H241C24C25H2510.2°0.3°
H241C24C29H2910.2°0.0°
H261C26C25H2510.4°0.3°
H281C28C29H2910.4°0.1°
H041C04C05H05258.6°174.9°
H041C04C05H051177.6°65.0°
H041C04N02H021122.8°145.0°
H071C07C08H082164.5°65.9°
H071C07C08H08175.5°174.0°
H071C07N06H061173.6°148.0°
H082C08C09H09153.6°177.1°
H081C08C09H091173.7°62.8°
H091C09C23H232150.0°25.4°
H091C09C23H23128.3°98.4°
H301C30C32H321167.5°65.0°
H301C30C32H32271.9°175.0°
H301C30N31H311176.7°145.0°
H331C33C34H3410.1°0.0°
H331C33C38H3810.5°0.3°
H341C34C35H3510.1°0.0°
H371C37C38H3810.8°0.4°
H402C40C42H42249.3°180.0°
H402C40C42H421168.9°60.0°
H401C40C42H42269.9°60.0°
H401C40C42H42149.7°180.0°

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon