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YVU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCsing1.38Å1.33Å
N3C3sing1.35Å1.39ÅAromatic
N3C4doub1.30Å1.31ÅAromatic
CC3sing1.41Å1.41ÅAromatic
CN1doub1.33Å1.35ÅAromatic
C3C2doub1.41Å1.39ÅAromatic
C4N4sing1.36Å1.37ÅAromatic
N1C1sing1.32Å1.34ÅAromatic
C2N4sing1.37Å1.38ÅAromatic
C2N2sing1.33Å1.34ÅAromatic
N4C5sing1.46Å1.46Å
C7Ssing1.81Å1.79Å
C7C6sing1.53Å1.52Å
C1N2doub1.32Å1.34ÅAromatic
OC5sing1.44Å1.41Å
OC6sing1.44Å1.44Å
C16C15doub1.38Å1.38ÅAromatic
C16C17sing1.38Å1.39ÅAromatic
SC8sing1.81Å1.82Å
C5C19sing1.55Å1.53Å
C6C18sing1.54Å1.53Å
C15C14sing1.38Å1.38ÅAromatic
C8C9sing1.53Å1.52Å
C19C18sing1.55Å1.54Å
C19O3sing1.43Å1.43Å
C17C12doub1.38Å1.39ÅAromatic
C18O2sing1.43Å1.42Å
C14C13doub1.38Å1.38ÅAromatic
C9N5sing1.46Å1.46Å
N5C10sing1.35Å1.35Å
C12C13sing1.38Å1.39ÅAromatic
C12C11sing1.51Å1.51Å
C10N6sing1.35Å1.35Å
C10O1doub1.22Å1.23Å
N6C11sing1.46Å1.45Å
C7H1sing1.09Å1.10Å
C7H2sing1.09Å1.10Å
C8H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C9H5sing1.09Å1.10Å
C9H6sing1.09Å1.10Å
C1H7sing1.08Å1.08Å
C5H8sing1.09Å1.10Å
C6H9sing1.09Å1.10Å
C4H10sing1.08Å1.08Å
O3H11sing0.97Å0.95Å
N6H12sing0.97Å1.00Å
C11H13sing1.09Å1.10Å
C11H14sing1.09Å1.10Å
C17H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
C15H17sing1.08Å1.08Å
C14H18sing1.08Å1.08Å
C13H19sing1.08Å1.08Å
N5H20sing0.97Å1.00Å
C18H21sing1.09Å1.10Å
O2H22sing0.97Å0.95Å
C19H23sing1.09Å1.10Å
NH24sing0.97Å1.00Å
NH25sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCC3124.0°120.7°
NCN1118.2°120.8°
CNH24109.5°120.0°
CNH25109.5°119.9°
C3N3C4103.8°109.4°
N3C3C132.5°134.7°
N3C3C2110.7°107.1°
N3C4N4114.1°110.0°
N3C4H10122.9°125.0°
C3CN1117.8°118.5°
CC3C2116.9°118.2°
CN1C1118.7°121.2°
C3C2N4105.7°106.0°
C3C2N2126.5°119.1°
C4N4C2105.7°107.4°
C4N4C5125.7°126.3°
N4C4H10122.9°125.0°
N1C1N2129.0°122.5°
N1C1H7115.5°118.7°
N4C2N2127.8°134.9°
C2N4C5128.3°126.3°
C2N2C1111.2°120.6°
N4C5O107.5°110.7°
N4C5C19115.5°110.6°
N4C5H8109.7°110.5°
SC7C6111.6°109.5°
C7SC8102.5°103.0°
SC7H1109.0°109.4°
SC7H2108.9°109.5°
C7C6O104.0°109.9°
C7C6C18114.2°109.9°
C6C7H1108.9°109.5°
C6C7H2108.9°109.5°
C7C6H9110.3°109.9°
N2C1H7115.5°118.8°
C5OC6108.5°106.9°
OC5C19104.8°103.5°
OC5H8110.4°110.7°
OC6C18106.9°107.3°
OC6H9111.3°110.0°
C15C16C17120.3°120.0°
C16C15C14119.6°120.0°
C15C16H16119.9°120.0°
C16C15H17120.2°120.0°
C16C17C12120.6°120.0°
C16C17H15119.7°120.0°
C17C16H16119.9°120.0°
SC8C9113.7°109.5°
SC8H3108.4°109.5°
SC8H4108.4°109.5°
C5C19C18101.4°102.1°
C5C19O3114.0°111.0°
C19C5H8108.8°110.6°
C5C19H23109.2°110.9°
C6C18C19103.6°104.2°
C6C18O2112.9°110.5°
C18C6H9110.0°109.8°
C6C18H21108.4°110.4°
C15C14C13120.2°120.0°
C14C15H17120.2°120.0°
C15C14H18119.9°120.0°
C8C9N5112.0°109.5°
C9C8H3108.4°109.5°
C9C8H4108.4°109.5°
C8C9H5108.8°109.4°
C8C9H6108.8°109.4°
C18C19O3112.2°110.9°
C19C18O2113.3°110.5°
C19C18H21108.4°110.6°
C18C19H23109.0°110.9°
C19O3H11109.5°114.1°
O3C19H23110.6°110.9°
C17C12C13118.6°120.0°
C17C12C11121.3°120.0°
C12C17H15119.7°120.0°
O2C18H21109.9°110.4°
C18O2H22109.5°114.0°
C14C13C12120.7°120.0°
C13C14H18119.9°120.0°
C14C13H19119.6°119.9°
C9N5C10123.6°120.0°
N5C9H5108.8°109.5°
N5C9H6108.8°109.5°
C9N5H20118.2°120.0°
N5C10N6115.5°120.1°
N5C10O1123.4°119.9°
C10N5H20118.2°119.9°
C13C12C11119.9°120.0°
C12C13H19119.6°120.1°
C12C11N6115.5°109.5°
C12C11H13108.0°109.5°
C12C11H14107.9°109.5°
N6C10O1121.1°120.0°
C10N6C11120.0°120.0°
C10N6H12120.0°119.9°
C11N6H12120.0°120.0°
N6C11H13107.9°109.5°
N6C11H14107.9°109.5°
H1C7H2109.5°109.4°
H3C8H4109.4°109.5°
H5C9H6109.5°109.4°
H13C11H14109.5°109.4°
H24NH25109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCC3N37.0°0.0°
NCC3N1175.6°180.0°
NCC3C2173.6°180.0°
NCN1C1173.2°180.0°
CNH24H25120.0°179.9°
N3C3CC2179.4°179.9°
N3C3CN1177.3°180.0°
C3N3C4N41.5°0.0°
N3C3C2N40.5°0.1°
N3C3C2N2179.7°180.0°
C3N3C4H10178.5°180.0°
C4N3C3C180.0°180.0°
C4N3C3C20.6°0.0°
N3C4N4H10180.0°180.0°
N3C4N4C21.8°0.0°
N3C4N4C5171.6°180.0°
C3CN1C12.7°0.0°
CC3C2N4179.1°180.0°
CC3C2N20.2°0.0°
C3CNH24175.7°0.1°
C3CNH2564.4°180.0°
N1CC3C22.1°0.0°
CN1C1N21.1°0.0°
CN1C1H7178.9°180.0°
N1CNH240.0°179.9°
N1CNH25120.0°0.0°
C3C2N4C41.3°0.1°
C3C2N4N2179.3°179.9°
C3C2N4C5171.9°180.0°
C3C2N2C11.7°0.1°
C4N4C2C5173.2°179.9°
C4N4C2N2179.4°180.0°
C4N4C5O56.9°19.2°
C4N4C5C1959.6°95.0°
C4N4C5H8177.0°142.2°
N1C1N2C21.0°0.0°
N1C1N2H7180.0°179.9°
N4C2N2C1177.4°180.0°
C2N4C5O115.0°160.9°
C2N4C5C19128.4°84.9°
C2N4C5H85.0°37.9°
C2N4C4H10178.2°180.0°
N2C2N4C57.3°0.1°
C2N2C1H7178.9°180.0°
N4C5OC19123.3°118.5°
N4C5OH8119.6°122.9°
N4C5OC6157.8°158.6°
N4C5C19H8123.8°122.8°
N4C5C19C18156.6°155.7°
N4C5C19O382.6°86.1°
C5N4C4H108.4°0.1°
N4C5C19H2341.6°37.5°
SC7C6H1120.3°120.0°
SC7C6H2120.3°120.1°
SC7C6O172.7°67.2°
SC7C6C1871.2°175.0°
C7SC8C997.0°180.0°
SC7H1H2119.1°120.0°
C7SC8H3142.4°60.0°
C7SC8H423.7°60.0°
SC7C6H953.3°54.0°
C7C6OC5136.8°146.0°
C7C6OC18121.2°119.5°
C7C6OH9118.7°121.1°
C6C7SC872.9°180.0°
C7C6C18H9124.6°121.0°
C7C6C18C19105.3°121.4°
C7C6C18O2131.7°119.8°
C6C7H1H2119.0°120.0°
C7C6C18H219.7°2.7°
OC5C19H8118.1°118.6°
C5OC6C1815.7°26.5°
OC5C19C1838.5°37.1°
OC5C19O3159.3°155.2°
C5OC6H9104.5°93.0°
OC5C19H2376.4°81.1°
C6OC5C1934.4°40.1°
OC6C18H9121.0°119.5°
OC6C18C199.1°2.0°
OC6C18O2113.8°120.7°
OC6C7H152.4°172.9°
OC6C7H267.0°52.9°
C6OC5H882.6°78.5°
OC6C18H21124.2°116.8°
C15C16C17H16180.0°179.9°
C16C15C14H17180.0°179.9°
C15C16C17C120.4°0.1°
C16C15C14C131.2°0.1°
C15C16C17H15179.6°180.0°
C16C15C14H18178.8°180.0°
C17C16C15C140.3°0.1°
C16C17C12H15180.0°179.9°
C16C17C12C131.5°0.1°
C16C17C12C11173.1°179.7°
C17C16C15H17179.7°179.9°
SC8C9H3120.6°120.0°
SC8C9H4120.6°120.0°
SC8C9N5174.5°180.0°
C8SC7H147.4°60.0°
C8SC7H2166.8°59.9°
SC8H3H4118.0°120.0°
SC8C9H554.1°60.0°
SC8C9H665.2°60.0°
C5C19C18C628.1°20.9°
C5C19C18O3122.0°118.2°
C5C19C18H23115.1°118.2°
C5C19O3H23123.5°123.7°
C5C19C18O294.7°97.8°
C5C19O3H11180.0°180.0°
C5C19C18H21143.1°139.6°
C6C18C19O2122.7°118.7°
C6C18C19H21115.1°118.7°
C6C18C19O3150.0°139.2°
C6C18O2H21121.2°122.5°
C18C6C7H1168.5°55.0°
C18C6C7H249.1°65.0°
C6C18O2H22180.0°180.0°
C6C18C19H2387.0°97.3°
C15C14C13H18180.0°179.9°
C15C14C13C122.3°0.1°
C14C15C16H16179.7°180.0°
C15C14C13H19177.7°179.8°
C8C9N5H5120.4°120.0°
C8C9N5H6120.4°120.0°
C8C9N5C1095.0°180.0°
C9C8H3H4118.1°120.0°
C8C9H5H6118.8°119.9°
C8C9N5H2085.0°0.0°
C18C19O3H23122.0°123.6°
C19C18O2H21121.4°122.7°
C18C19C5H879.6°81.5°
C19C18C6H9130.1°117.6°
C18C19O3H1165.5°67.3°
C19C18O2H2262.6°65.2°
O3C19C18O227.3°20.4°
O3C19C5H841.2°36.6°
O3C19C18H2194.9°102.2°
C17C12C13C142.4°0.1°
C17C12C13C11174.7°179.8°
C17C12C11N614.1°89.8°
C17C12C11H13135.0°150.2°
C17C12C11H14106.7°30.2°
C12C17C16H16179.6°180.0°
C17C12C13H19177.6°179.8°
O2C18C6H97.1°1.2°
O2C18C19H23150.2°144.0°
C14C13C12H19180.0°179.6°
C14C13C12C11172.3°179.7°
C13C14C15H17178.8°179.8°
C9N5C10H20180.0°180.0°
C9N5C10N6179.5°180.0°
C9N5C10O10.7°0.0°
N5C9C8H364.9°60.0°
N5C9C8H453.8°60.0°
N5C9H5H6118.8°120.0°
N5C10N6O1178.9°180.0°
N5C10N6C11178.9°180.0°
C10N5C9H5144.6°60.0°
C10N5C9H625.3°60.0°
N5C10N6H121.1°0.0°
C13C12C11N6171.3°90.0°
C13C12C11H1350.5°30.0°
C13C12C11H1467.8°149.9°
C13C12C17H15178.6°180.0°
C12C13C14H18177.8°180.0°
C12C11N6C1079.8°180.0°
C12C11N6H13120.9°120.0°
C12C11N6H14120.9°120.0°
C12C11N6H12100.1°0.0°
C12C11H13H14117.3°120.0°
C11C12C17H156.9°0.2°
C11C12C13H197.7°0.1°
C10N6C11H12180.0°180.0°
C10N6C11H1341.0°60.0°
C10N6C11H14159.3°60.0°
N6C10N5H200.5°0.0°
O1C10N6C112.2°0.0°
O1C10N6H12177.7°180.0°
O1C10N5H20179.4°180.0°
N6C11H13H14117.3°120.0°
H1C7C6H967.1°66.0°
H2C7C6H9173.6°174.0°
H3C8C9H5174.7°60.0°
H3C8C9H655.5°180.0°
H4C8C9H566.6°180.0°
H4C8C9H6174.2°60.0°
H5C9N5H2035.4°120.0°
H6C9N5H20154.6°120.0°
H8C5C19H23165.4°160.3°
H9C6C18H21114.9°123.7°
H11O3C19H2356.5°56.3°
H12N6C11H13139.0°120.0°
H12N6C11H1420.7°120.0°
H15C17C16H160.4°0.1°
H16C16C15H170.3°0.0°
H17C15C14H181.1°0.1°
H18C14C13H192.3°0.3°
H21C18O2H2258.8°57.5°
H21C18C19H2328.0°21.4°

222415

PDB entries from 2024-07-10

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