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YUG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
BR3C4'sing1.89Å1.92Å
C4'C5'doub1.38Å1.49ÅAromatic
C4'C3'sing1.38Å1.47ÅAromatic
C5'C6'sing1.38Å1.48ÅAromatic
C3'C2'doub1.38Å1.47ÅAromatic
C6'C1'doub1.39Å1.48ÅAromatic
C2'C1'sing1.39Å1.47ÅAromatic
C2'BR1sing1.89Å1.91Å
C1'Osing1.36Å1.37Å
C6C5doub1.38Å1.48ÅAromatic
C6C1sing1.39Å1.50ÅAromatic
C5C4sing1.38Å1.48ÅAromatic
OC1sing1.36Å1.39Å
C1C2doub1.39Å1.48ÅAromatic
C4BR4sing1.89Å1.93Å
C4C3doub1.39Å1.47ÅAromatic
C2C3sing1.39Å1.47ÅAromatic
C2BR2sing1.89Å1.93Å
C3O3sing1.36Å1.37Å
O3H1sing0.97Å0.95Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C3'H4sing1.08Å1.08Å
C5'H5sing1.08Å1.08Å
C6'H6sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
BR3C4'C5'120.8°120.0°
BR3C4'C3'117.0°120.0°
C5'C4'C3'122.2°120.0°
C4'C5'C6'121.2°120.1°
C4'C5'H5119.4°119.9°
C4'C3'C2'115.5°120.1°
C4'C3'H4122.2°120.0°
C5'C6'C1'116.7°119.9°
C6'C5'H5119.4°120.0°
C5'C6'H6121.6°120.0°
C3'C2'C1'123.6°120.0°
C3'C2'BR1121.2°120.0°
C2'C3'H4122.3°120.0°
C6'C1'C2'120.7°119.9°
C6'C1'O122.7°120.0°
C1'C6'H6121.6°120.0°
C1'C2'BR1115.1°120.0°
C2'C1'O116.6°120.1°
C1'OC1113.4°118.0°
C5C6C1119.2°120.0°
C6C5C4120.3°120.1°
C6C5H2119.9°119.9°
C5C6H3120.4°119.9°
C6C1O124.4°120.0°
C6C1C2119.0°120.0°
C1C6H3120.4°120.0°
C5C4BR4123.0°120.0°
C5C4C3120.6°120.1°
C4C5H2119.8°119.9°
OC1C2116.6°120.0°
C1C2C3121.8°119.8°
C1C2BR2121.0°120.1°
BR4C4C3116.4°120.0°
C4C3C2119.1°119.9°
C4C3O3120.7°120.1°
C3C2BR2117.2°120.1°
C2C3O3120.3°120.0°
C3O3H1109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
BR3C4'C5'C3'179.9°180.0°
BR3C4'C5'C6'179.6°179.7°
BR3C4'C3'C2'179.9°180.0°
BR3C4'C3'H40.1°0.0°
BR3C4'C5'H50.4°0.0°
C4'C5'C6'H5180.0°179.7°
C5'C4'C3'C2'0.2°0.0°
C4'C5'C6'C1'1.4°0.6°
C5'C4'C3'H4179.8°180.0°
C4'C5'C6'H6178.6°180.0°
C3'C4'C5'C6'0.5°0.3°
C4'C3'C2'H4180.0°179.9°
C4'C3'C2'C1'0.9°0.0°
C4'C3'C2'BR1179.8°180.0°
C3'C4'C5'H5179.5°180.0°
C5'C6'C1'H6180.0°179.4°
C5'C6'C1'C2'2.1°0.5°
C5'C6'C1'O180.0°179.7°
C3'C2'C1'C6'1.9°0.2°
C3'C2'C1'BR1179.0°180.0°
C3'C2'C1'O179.9°179.9°
C6'C1'C2'O178.0°179.7°
C6'C1'C2'BR1179.1°179.7°
C6'C1'OC1101.3°94.1°
C1'C6'C5'H5178.6°179.7°
C2'C1'OC180.8°86.2°
C1'C2'C3'H4179.1°180.0°
C2'C1'C6'H6177.9°180.0°
BR1C2'C1'O1.1°0.0°
BR1C2'C3'H40.2°0.0°
C1'OC1C67.7°5.3°
C1'OC1C2172.8°174.4°
OC1'C6'H60.0°0.3°
C5C6C1H3180.0°179.5°
C6C5C4H2180.0°179.7°
C5C6C1O179.7°179.8°
C5C6C1C20.2°0.5°
C6C5C4BR4178.1°179.7°
C6C5C4C30.1°0.3°
C1C6C5C40.2°0.6°
C6C1OC2179.5°179.7°
C6C1C2C30.1°0.3°
C6C1C2BR2178.5°179.8°
C1C6C5H2179.8°179.7°
C5C4BR4C3178.1°180.0°
C5C4C3C20.0°0.0°
C5C4C3O3178.6°180.0°
C4C5C6H3179.8°180.0°
OC1C2C3179.6°180.0°
OC1C2BR22.0°0.1°
OC1C6H30.3°0.3°
C1C2C3C40.0°0.0°
C1C2C3BR2178.4°179.9°
C1C2C3O3178.6°180.0°
C2C1C6H3179.8°180.0°
BR4C4C3C2178.1°180.0°
BR4C4C3O33.3°0.0°
BR4C4C5H21.9°0.0°
C4C3C2O3178.6°180.0°
C4C3C2BR2178.4°179.9°
C4C3O3H1180.0°90.0°
C3C4C5H2179.9°180.0°
C2C3O3H11.4°90.0°
BR2C2C3O33.0°0.1°
H2C5C6H30.2°0.3°
H5C5'C6'H61.4°0.3°

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PDB entries from 2026-02-04

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