Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YU4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5N2doub1.32Å1.34ÅAromatic
C5C4sing1.38Å1.40ÅAromatic
N2C6sing1.32Å1.34ÅAromatic
C4C3doub1.39Å1.39ÅAromatic
C6C2doub1.39Å1.39ÅAromatic
C3C2sing1.39Å1.39ÅAromatic
C2N1sing1.40Å1.46Å
O2C10doub1.22Å1.41Å
N1C7sing1.36Å1.33Å
N1C1sing1.35Å1.36Å
C7C8doub1.38Å1.39Å
C10N3sing1.35Å1.34Å
C10C9sing1.47Å1.41Å
N3C12sing1.34Å1.34Å
O1C1doub1.22Å1.39Å
C1C14sing1.42Å1.40Å
C9C8sing1.48Å1.53Å
C9C11doub1.36Å1.39Å
C8C13sing1.41Å1.40Å
C12O3doub1.22Å1.40Å
C12N4sing1.34Å1.33Å
C11N4sing1.37Å1.33Å
C14C13doub1.38Å1.40Å
C14C15sing1.48Å1.55Å
C15C16doub1.39Å1.40ÅAromatic
C15C23sing1.39Å1.39ÅAromatic
C16C17sing1.39Å1.41ÅAromatic
C19C18sing1.53Å1.55Å
C19C20sing1.53Å1.53Å
C23C22doub1.38Å1.39ÅAromatic
C18O4sing1.43Å1.41Å
C17O4sing1.36Å1.41Å
C17C21doub1.39Å1.38ÅAromatic
C20F1sing1.40Å1.36Å
C20F2sing1.40Å1.37Å
C20F3sing1.40Å1.37Å
C22C21sing1.38Å1.39ÅAromatic
C22CL1sing1.74Å1.78Å
C7H5sing1.08Å1.08Å
C4H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C16H10sing1.08Å1.08Å
C11H7sing1.08Å1.08Å
C18H12sing1.09Å1.10Å
C18H11sing1.09Å1.10Å
C23H16sing1.08Å1.08Å
C19H13sing1.09Å1.10Å
C19H14sing1.09Å1.10Å
C21H15sing1.08Å1.08Å
C13H9sing1.08Å1.08Å
C3H1sing1.08Å1.08Å
N3H6sing0.97Å1.00Å
N4H8sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2C5C4121.0°120.9°
C5N2C6119.8°121.8°
N2C5H3119.5°119.6°
C5C4C3119.3°119.3°
C5C4H2120.4°120.3°
C4C5H3119.5°119.6°
N2C6C2122.7°120.7°
N2C6H4118.6°119.6°
C4C3C2119.1°118.3°
C3C4H2120.3°120.4°
C4C3H1120.5°120.8°
C6C2C3118.1°119.1°
C6C2N1120.4°120.5°
C2C6H4118.7°119.7°
C3C2N1121.5°120.5°
C2C3H1120.4°120.9°
C2N1C7119.5°119.4°
C2N1C1119.3°119.5°
O2C10N3117.8°120.6°
O2C10C9124.0°120.7°
C7N1C1121.1°121.1°
N1C7C8120.5°120.7°
N1C7H5119.7°119.6°
N1C1O1119.1°119.9°
N1C1C14121.6°120.2°
C7C8C9118.2°120.1°
C7C8C13119.4°119.7°
C8C7H5119.7°119.7°
N3C10C9118.2°118.7°
C10N3C12121.1°120.3°
C10N3H6119.4°119.9°
C10C9C8125.2°120.8°
C10C9C11118.5°118.4°
N3C12O3119.4°119.1°
N3C12N4121.8°121.8°
C12N3H6119.4°119.8°
O1C1C14119.3°119.9°
C1C14C13117.5°119.2°
C1C14C15120.4°120.4°
C8C9C11116.1°120.8°
C9C8C13122.3°120.2°
C9C11N4120.2°119.5°
C9C11H7119.9°120.3°
C8C13C14119.7°119.0°
C8C13H9120.1°120.5°
O3C12N4118.8°119.1°
C12N4C11120.1°121.3°
C12N4H8120.0°119.3°
N4C11H7119.9°120.2°
C11N4H8119.9°119.4°
C13C14C15122.0°120.4°
C14C13H9120.1°120.5°
C14C15C16123.4°120.1°
C14C15C23118.8°120.1°
C16C15C23117.7°119.8°
C15C16C17122.2°119.9°
C15C16H10118.9°120.1°
C15C23C22120.3°119.9°
C15C23H16119.8°120.1°
C16C17O4124.5°120.0°
C16C17C21118.6°120.0°
C17C16H10118.9°120.0°
C18C19C20109.6°109.5°
C19C18O4114.2°109.5°
C19C18H12108.3°109.5°
C19C18H11108.3°109.4°
C18C19H13109.4°109.4°
C18C19H14109.4°109.5°
C19C20F1109.4°109.4°
C19C20F2111.0°109.5°
C19C20F3107.9°109.5°
C20C19H13109.4°109.5°
C20C19H14109.4°109.5°
C23C22C21121.6°120.2°
C23C22CL1119.5°119.9°
C22C23H16119.9°120.0°
C18O4C17117.0°117.0°
O4C18H12108.3°109.5°
O4C18H11108.3°109.5°
O4C17C21116.9°120.0°
C17C21C22119.5°120.2°
C17C21H15120.2°119.9°
F1C20F2108.6°109.5°
F1C20F3109.3°109.4°
F2C20F3110.6°109.5°
C21C22CL1118.9°119.9°
C22C21H15120.3°119.9°
H12C18H11109.5°109.4°
H13C19H14109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2C5C4H3180.0°180.0°
N2C5C4C30.1°0.0°
C5N2C6C20.6°0.2°
N2C5C4H2179.9°179.7°
C5N2C6H4179.4°179.7°
C4C5N2C60.8°0.0°
C5C4C3H2180.0°179.7°
C5C4C3C20.9°0.3°
C5C4C3H1179.1°179.7°
N2C6C2H4180.0°179.5°
N2C6C2C30.3°0.5°
N2C6C2N1179.5°179.4°
C6N2C5H3179.2°180.0°
C4C3C2C61.1°0.5°
C4C3C2H1180.0°180.0°
C4C3C2N1178.8°179.4°
C3C4C5H3179.9°180.0°
C6C2C3N1179.9°180.0°
C6C2N1C7112.9°92.6°
C6C2N1C168.5°87.4°
C6C2C3H1178.9°179.5°
C3C2N1C767.2°87.4°
C3C2N1C1111.4°92.6°
C2C3C4H2179.2°180.0°
C3C2C6H4179.6°180.0°
C2N1C7C1178.6°180.0°
C2N1C7C8179.5°180.0°
C2N1C1O10.5°0.2°
C2N1C1C14179.7°180.0°
C2N1C7H50.5°0.3°
N1C2C6H40.5°0.1°
N1C2C3H11.2°0.6°
O2C10N3C9178.4°179.7°
O2C10N3C12179.9°179.7°
O2C10C9C83.6°0.3°
O2C10C9C11179.5°179.7°
O2C10N3H60.1°0.2°
N1C7C8H5180.0°179.7°
C7N1C1O1179.1°179.8°
C7N1C1C141.2°0.0°
N1C7C8C9178.5°179.7°
N1C7C8C131.7°0.3°
C1N1C7C81.9°0.1°
N1C1O1C14179.8°179.7°
N1C1C14C130.3°0.3°
N1C1C14C15177.8°180.0°
C1N1C7H5178.1°179.7°
C7C8C9C1035.8°117.8°
C7C8C9C13176.7°179.9°
C7C8C9C11140.2°62.2°
C7C8C13C140.8°0.6°
C7C8C13H9179.2°180.0°
C10N3C12H6180.0°179.9°
N3C10C9C8178.2°180.0°
N3C10C9C112.2°0.0°
C10N3C12O3180.0°180.0°
C10N3C12N40.3°0.0°
C9C10N3C121.5°0.0°
C10C9C8C11176.1°180.0°
C10C9C8C13147.5°62.2°
C10C9C11N41.7°0.1°
C10C9C11H7178.3°180.0°
C9C10N3H6178.5°179.9°
N3C12O3N4179.8°180.0°
N3C12N4C110.3°0.0°
N3C12N4H8179.7°179.9°
O1C1C14C13180.0°179.9°
O1C1C14C151.9°0.3°
C1C14C13C80.1°0.6°
C1C14C13C15178.1°179.6°
C1C14C15C1641.0°65.0°
C1C14C15C23136.8°114.7°
C1C14C13H9179.9°180.0°
C8C9C11N4178.0°180.0°
C9C8C13C14177.5°179.4°
C9C8C7H51.5°0.0°
C8C9C11H72.0°0.0°
C9C8C13H92.5°0.1°
C11C9C8C1336.5°117.9°
C9C11N4C120.5°0.1°
C9C11N4H7180.0°179.9°
C9C11N4H8179.5°179.9°
C8C13C14H9180.0°179.4°
C8C13C14C15177.9°179.7°
C13C8C7H5178.3°180.0°
O3C12N4C11179.5°180.0°
O3C12N3H60.1°0.1°
O3C12N4H80.5°0.1°
C12N4C11H8180.0°179.9°
C12N4C11H7179.5°180.0°
N4C12N3H6179.7°179.9°
C13C14C15C16141.0°115.3°
C13C14C15C2341.2°64.9°
C14C15C16C23177.8°179.7°
C14C15C16C17178.8°180.0°
C14C15C23C22178.4°180.0°
C14C15C16H101.2°0.0°
C14C15C23H161.6°0.0°
C15C14C13H92.0°0.4°
C15C16C17H10180.0°180.0°
C16C15C23C220.5°0.3°
C15C16C17O4179.8°180.0°
C15C16C17C210.6°0.0°
C16C15C23H16179.5°179.7°
C23C15C16C171.0°0.3°
C15C23C22H16180.0°180.0°
C15C23C22C210.5°0.0°
C15C23C22CL1179.0°180.0°
C23C15C16H10179.0°179.7°
C16C17O4C1821.1°180.0°
C16C17O4C21179.5°180.0°
C16C17C21C220.3°0.3°
C16C17C21H15179.7°180.0°
C18C19C20H13120.0°120.0°
C18C19C20H14120.0°120.0°
C19C18O4H12120.7°120.0°
C19C18O4H11120.7°120.0°
C19C18O4C17116.8°180.0°
C18C19C20F1132.4°60.0°
C18C19C20F2107.8°180.0°
C18C19C20F313.5°60.0°
C19C18H12H11117.9°119.9°
C18C19H13H14119.9°120.0°
C20C19C18O450.7°180.0°
C19C20F1F2121.3°120.0°
C19C20F1F3118.0°120.0°
C19C20F2F3119.7°120.0°
C20C19C18H1270.0°60.0°
C20C19C18H11171.4°60.0°
C20C19H13H14119.9°120.0°
C23C22C21C170.9°0.2°
C23C22C21CL1178.6°179.9°
C23C22C21H15179.1°180.0°
C18O4C17C21158.4°0.0°
O4C18H12H11117.8°120.0°
O4C18C19H1369.3°60.0°
O4C18C19H14170.7°60.0°
O4C17C21C22179.2°179.7°
O4C17C16H100.2°0.0°
C17O4C18H12122.5°60.0°
C17O4C18H113.9°60.0°
O4C17C21H150.8°0.0°
C17C21C22H15180.0°179.8°
C17C21C22CL1179.5°179.7°
C21C17C16H10179.4°180.0°
F1C20F2F3120.0°120.0°
F1C20C19H1312.4°60.0°
F1C20C19H14107.6°180.0°
F2C20C19H13132.2°60.0°
F2C20C19H1412.2°60.0°
F3C20C19H13106.5°179.9°
F3C20C19H14133.5°60.0°
C21C22C23H16179.6°180.0°
CL1C22C23H161.0°0.0°
CL1C22C21H150.5°0.1°
H2C4C5H30.1°0.3°
H2C4C3H10.8°0.0°
H7C11N4H80.5°0.1°
H12C18C19H13170.0°60.0°
H12C18C19H1450.0°180.0°
H11C18C19H1351.4°180.0°
H11C18C19H1468.6°60.1°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon