Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YSM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F1C25sing1.35Å1.36Å
C25C24doub1.39Å1.39ÅAromatic
C25C26sing1.38Å1.39ÅAromatic
C24C23sing1.38Å1.39ÅAromatic
C26C21doub1.38Å1.38ÅAromatic
C23C22doub1.38Å1.39ÅAromatic
C21C22sing1.38Å1.39ÅAromatic
C21C20sing1.51Å1.52Å
C20O4sing1.43Å1.41Å
O4C19sing1.36Å1.40Å
C18C19doub1.39Å1.40ÅAromatic
C18C17sing1.38Å1.39ÅAromatic
CL1C17sing1.74Å1.78Å
C19C27sing1.38Å1.40ÅAromatic
C17C16doub1.38Å1.40ÅAromatic
C27C15doub1.39Å1.39ÅAromatic
C16C15sing1.39Å1.39ÅAromatic
C15C14sing1.48Å1.52Å
O1C1doub1.22Å1.40Å
C14C1sing1.42Å1.38Å
C14C13doub1.38Å1.38Å
C1N1sing1.35Å1.34Å
C13C8sing1.41Å1.38Å
N1C2sing1.40Å1.47Å
N1C7sing1.36Å1.34Å
C2C3doub1.39Å1.40ÅAromatic
C2C6sing1.39Å1.38ÅAromatic
C3N2sing1.32Å1.35ÅAromatic
C8C7doub1.38Å1.39Å
C8C9sing1.48Å1.53Å
C6C5doub1.38Å1.39ÅAromatic
N2C4doub1.32Å1.34ÅAromatic
C11C9doub1.36Å1.40Å
C11N4sing1.37Å1.35Å
C5C4sing1.38Å1.40ÅAromatic
C9C10sing1.47Å1.39Å
N4C12sing1.34Å1.34Å
C10O2doub1.22Å1.40Å
C10N3sing1.35Å1.35Å
C12N3sing1.35Å1.34Å
C12O3doub1.22Å1.39Å
C3H1sing1.08Å1.08Å
N3H6sing0.97Å1.00Å
C4H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C7H5sing1.08Å1.08Å
C11H7sing1.08Å1.08Å
C13H9sing1.08Å1.08Å
C16H10sing1.08Å1.08Å
C18H11sing1.08Å1.08Å
C20H13sing1.09Å1.10Å
C20H12sing1.09Å1.10Å
C22H14sing1.08Å1.08Å
C23H15sing1.08Å1.08Å
C24H16sing1.08Å1.08Å
C26H17sing1.08Å1.08Å
C27H18sing1.08Å1.08Å
N4H8sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F1C25C24119.3°120.0°
F1C25C26120.0°120.1°
C24C25C26120.7°119.9°
C25C24C23120.0°120.0°
C25C24H16119.9°120.0°
C25C26C21119.1°120.0°
C25C26H17120.5°120.0°
C24C23C22119.2°120.0°
C24C23H15120.4°120.0°
C23C24H16120.0°120.0°
C26C21C22120.3°120.0°
C26C21C20120.1°120.0°
C21C26H17120.5°120.0°
C23C22C21120.6°120.1°
C23C22H14119.7°120.0°
C22C23H15120.4°120.0°
C22C21C20119.6°120.0°
C21C22H14119.7°120.0°
C21C20O4108.1°109.4°
C21C20H13109.8°109.5°
C21C20H12109.8°109.5°
C20O4C19113.0°117.0°
O4C20H13109.8°109.4°
O4C20H12109.8°109.4°
O4C19C18121.0°119.9°
O4C19C27118.3°120.0°
C19C18C17118.9°120.1°
C18C19C27120.6°120.1°
C19C18H11120.6°119.9°
C18C17CL1120.2°119.9°
C18C17C16120.8°120.2°
C17C18H11120.5°120.0°
CL1C17C16119.0°119.9°
C19C27C15119.9°119.8°
C19C27H18120.0°120.0°
C17C16C15119.9°119.9°
C17C16H10120.1°120.0°
C27C15C16119.9°119.8°
C27C15C14119.9°120.1°
C15C27H18120.0°120.1°
C16C15C14120.2°120.1°
C15C16H10120.1°120.1°
C15C14C1120.9°120.4°
C15C14C13119.5°120.4°
O1C1C14118.5°119.9°
O1C1N1121.1°119.9°
C1C14C13119.6°119.2°
C14C1N1120.4°120.2°
C14C13C8120.0°119.0°
C14C13H9120.0°120.6°
C1N1C2119.9°119.4°
C1N1C7120.8°121.1°
C13C8C7118.1°119.7°
C13C8C9117.9°120.2°
C8C13H9120.0°120.4°
C2N1C7119.3°119.5°
N1C2C3119.2°120.4°
N1C2C6122.1°120.5°
N1C7C8121.2°120.8°
N1C7H5119.4°119.6°
C3C2C6118.8°119.1°
C2C3N2122.2°120.6°
C2C3H1118.9°119.8°
C2C6C5118.1°118.3°
C2C6H4120.9°120.8°
C3N2C4119.9°121.8°
N2C3H1118.9°119.6°
C7C8C9123.9°120.1°
C8C7H5119.4°119.6°
C8C9C11119.2°120.8°
C8C9C10123.3°120.9°
C6C5C4120.9°119.3°
C6C5H3119.6°120.4°
C5C6H4121.0°120.8°
N2C4C5120.1°120.9°
N2C4H2120.0°119.6°
C9C11N4120.6°119.5°
C11C9C10117.5°118.3°
C9C11H7119.7°120.3°
C11N4C12119.9°121.4°
N4C11H7119.7°120.2°
C11N4H8120.1°119.3°
C5C4H2119.9°119.5°
C4C5H3119.5°120.3°
C9C10O2121.4°120.6°
C9C10N3119.7°118.7°
N4C12N3121.1°121.8°
N4C12O3120.2°119.1°
C12N4H8120.0°119.3°
O2C10N3118.8°120.6°
C10N3C12121.2°120.3°
C10N3H6119.4°119.9°
N3C12O3118.7°119.1°
C12N3H6119.4°119.8°
H13C20H12109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F1C25C24C26179.9°179.7°
F1C25C24C23179.8°179.9°
F1C25C26C21179.4°179.7°
F1C25C24H160.2°0.1°
F1C25C26H170.7°0.3°
C25C24C23H16180.0°179.9°
C24C25C26C210.5°0.6°
C25C24C23C220.2°0.1°
C25C24C23H15179.8°180.0°
C24C25C26H17179.5°180.0°
C26C25C24C230.1°0.3°
C25C26C21H17180.0°179.4°
C25C26C21C220.6°0.6°
C25C26C21C20179.0°179.8°
C26C25C24H16179.9°179.8°
C24C23C22H15180.0°179.9°
C24C23C22C210.2°0.1°
C24C23C22H14179.8°180.0°
C26C21C22C230.3°0.4°
C26C21C22C20178.4°179.6°
C26C21C20O4112.0°90.3°
C26C21C20H13128.2°149.7°
C26C21C20H127.8°29.7°
C26C21C22H14179.7°179.7°
C23C22C21H14180.0°179.9°
C23C22C21C20178.7°180.0°
C22C23C24H16179.7°180.0°
C22C21C20O466.4°90.1°
C22C21C20H1353.4°29.9°
C22C21C20H12173.8°150.0°
C21C22C23H15179.9°180.0°
C22C21C26H17179.4°180.0°
C21C20O4H13119.8°120.0°
C21C20O4H12119.8°120.0°
C21C20O4C19168.1°180.0°
C21C20H13H12120.6°120.1°
C20C21C22H141.3°0.1°
C20C21C26H170.9°0.3°
C20O4C19C18106.6°0.1°
C20O4C19C2772.0°179.7°
O4C20H13H12120.6°119.9°
O4C19C18C27178.5°179.6°
O4C19C18C17178.6°180.0°
O4C19C27C15178.5°179.8°
O4C19C18H111.3°0.3°
C19O4C20H1372.1°59.9°
C19O4C20H1248.3°60.0°
O4C19C27H181.5°0.1°
C19C18C17H11180.0°179.7°
C19C18C17CL1179.8°179.9°
C19C18C17C160.0°0.0°
C18C19C27C150.0°0.6°
C18C19C27H18180.0°179.7°
C18C17CL1C16179.9°180.0°
C17C18C19C270.1°0.3°
C18C17C16C150.4°0.0°
C18C17C16H10179.6°180.0°
CL1C17C16C15179.5°180.0°
CL1C17C16H100.5°0.0°
CL1C17C18H110.2°0.2°
C19C27C15H18180.0°179.7°
C19C27C15C160.3°0.5°
C19C27C15C14179.8°179.7°
C27C19C18H11179.8°180.0°
C17C16C15C270.5°0.2°
C17C16C15H10180.0°180.0°
C17C16C15C14180.0°179.9°
C16C17C18H11180.0°179.7°
C27C15C16C14179.5°179.7°
C27C15C14C153.6°64.7°
C27C15C14C13126.7°115.3°
C27C15C16H10179.5°179.7°
C16C15C14C1126.9°115.0°
C16C15C14C1352.8°65.0°
C16C15C27H18179.6°179.8°
C15C14C1O10.1°0.3°
C15C14C1C13179.7°180.0°
C15C14C1N1179.5°180.0°
C15C14C13C8179.7°180.0°
C15C14C13H90.3°0.0°
C14C15C16H100.0°0.0°
C14C15C27H180.2°0.0°
O1C1C14N1179.4°179.7°
O1C1C14C13179.8°179.7°
O1C1N1C21.7°0.3°
O1C1N1C7179.4°179.8°
C1C14C13C80.0°0.0°
C14C1N1C2178.9°180.0°
C14C1N1C71.2°0.1°
C1C14C13H9180.0°180.0°
C13C14C1N10.7°0.0°
C14C13C8H9180.0°179.9°
C14C13C8C70.3°0.1°
C14C13C8C9179.8°180.0°
C1N1C2C7177.8°179.9°
C1N1C2C376.3°113.2°
C1N1C2C6104.8°67.1°
C1N1C7C80.8°0.1°
C1N1C7H5179.2°180.0°
C13C8C7N10.1°0.1°
C13C8C7C9179.4°179.9°
C13C8C9C1120.2°114.1°
C13C8C9C10159.2°65.8°
C13C8C7H5179.9°180.0°
N1C2C3C6178.9°179.6°
N1C2C3N2179.7°180.0°
C2N1C7C8178.6°180.0°
N1C2C6C5179.4°180.0°
N1C2C3H10.3°0.1°
N1C2C6H40.6°0.0°
C2N1C7H51.4°0.1°
C7N1C2C3101.5°66.8°
C7N1C2C677.4°112.8°
N1C7C8H5180.0°179.9°
N1C7C8C9179.3°180.0°
C2C3N2H1180.0°179.9°
C3C2C6C50.5°0.3°
C2C3N2C40.7°0.1°
C3C2C6H4179.5°179.6°
C6C2C3N20.8°0.4°
C2C6C5H4180.0°180.0°
C2C6C5C40.2°0.0°
C6C2C3H1179.2°179.7°
C2C6C5H3179.8°180.0°
C3N2C4C50.4°0.2°
C3N2C4H2179.5°180.0°
C7C8C9C11159.2°66.0°
C7C8C9C1021.4°114.1°
C7C8C13H9179.7°180.0°
C8C9C11C10179.4°179.9°
C8C9C11N4179.5°179.7°
C8C9C10O20.4°0.1°
C8C9C10N3179.8°180.0°
C9C8C7H50.7°0.1°
C8C9C11H70.5°0.0°
C9C8C13H90.2°0.0°
C6C5C4N20.2°0.2°
C6C5C4H3180.0°180.0°
C6C5C4H2179.8°180.0°
N2C4C5H2180.0°179.7°
C4N2C3H1179.2°180.0°
N2C4C5H3179.8°179.7°
C9C11N4H7180.0°179.7°
C9C11N4C120.2°0.3°
C11C9C10O2179.7°180.0°
C11C9C10N30.5°0.1°
C9C11N4H8179.8°180.0°
N4C11C9C100.2°0.2°
C11N4C12H8180.0°179.7°
C11N4C12N30.2°0.0°
C11N4C12O3179.8°180.0°
C4C5C6H4179.8°179.9°
C9C10O2N3179.8°180.0°
C9C10N3C120.5°0.3°
C9C10N3H6179.5°180.0°
C10C9C11H7179.8°179.9°
N4C12N3C100.2°0.3°
N4C12N3O3180.0°180.0°
N4C12N3H6179.8°180.0°
C12N4C11H7179.8°180.0°
O2C10N3C12179.7°179.7°
O2C10N3H60.3°0.0°
C10N3C12H6180.0°179.7°
C10N3C12O3179.9°179.7°
N3C12N4H8179.8°179.8°
O3C12N3H60.1°0.0°
O3C12N4H80.2°0.2°
H2C4C5H30.2°0.0°
H3C5C6H40.2°0.1°
H7C11N4H80.2°0.3°
H14C22C23H150.1°0.1°
H15C23C24H160.2°0.1°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon