Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YSE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C2doub1.31Å1.32Å
C2C1sing1.51Å1.50Å
C2C3sing1.51Å1.50Å
OC3sing1.43Å1.43Å
C1O1sing1.43Å1.43Å
C1Csing1.53Å1.53Å
C3C4sing1.53Å1.53Å
CC5sing1.51Å1.51Å
C4C5sing1.51Å1.51Å
C5C6doub1.33Å1.34Å
C6C7sing1.47Å1.46Å
C7C8doub1.33Å1.34Å
C8C14sing1.52Å1.51Å
C8C10sing1.50Å1.49Å
C15C10sing1.53Å1.52Å
C15C16sing1.56Å1.53Å
C18C11sing1.53Å1.53Å
C14C13sing1.53Å1.53Å
C10C11sing1.56Å1.51Å
C16C17sing1.55Å1.53Å
C11C17sing1.52Å1.52Å
C11C12sing1.51Å1.52Å
C13C12sing1.54Å1.53Å
C17C19sing1.53Å1.53Å
C23O2sing1.43Å1.43Å
C23C22sing1.53Å1.52Å
C19C21sing1.53Å1.52Å
C19C20sing1.53Å1.52Å
C21C22sing1.53Å1.52Å
C21C24sing1.53Å1.52Å
C24C25sing1.53Å1.51Å
O2H1sing0.97Å0.95Å
C23H2sing1.09Å1.10Å
C23H3sing1.09Å1.10Å
C22H4sing1.09Å1.10Å
C22H5sing1.09Å1.10Å
C21H6sing1.09Å1.10Å
C24H7sing1.09Å1.10Å
C24H8sing1.09Å1.10Å
C25H9sing1.09Å1.10Å
C25H10sing1.09Å1.10Å
C25H11sing1.09Å1.10Å
C19H12sing1.09Å1.10Å
C20H13sing1.09Å1.10Å
C20H14sing1.09Å1.10Å
C20H15sing1.09Å1.10Å
C17H16sing1.09Å1.10Å
C16H17sing1.09Å1.10Å
C16H18sing1.09Å1.10Å
C15H19sing1.09Å1.10Å
C15H20sing1.09Å1.10Å
C10H21sing1.09Å1.10Å
C18H22sing1.09Å1.10Å
C18H23sing1.09Å1.10Å
C18H24sing1.09Å1.10Å
C12H25sing1.09Å1.10Å
C12H26sing1.09Å1.10Å
C13H27sing1.09Å1.10Å
C13H28sing1.09Å1.10Å
C14H29sing1.09Å1.10Å
C14H30sing1.09Å1.10Å
C7H31sing1.08Å1.08Å
C6H32sing1.08Å1.08Å
CH33sing1.09Å1.10Å
CH34sing1.09Å1.10Å
C4H35sing1.09Å1.10Å
C4H36sing1.09Å1.10Å
C3H37sing1.09Å1.10Å
OH38sing0.97Å0.95Å
C9H39sing1.08Å1.08Å
C9H40sing1.08Å1.08Å
C1H41sing1.09Å1.10Å
O1H42sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C9C2C1120.2°120.5°
C9C2C3121.5°120.8°
C2C9H39120.0°120.0°
C2C9H40120.0°120.0°
C1C2C3118.3°118.7°
C2C1O1109.5°109.6°
C2C1C111.2°108.6°
C2C1H41108.6°109.6°
C2C3O110.3°109.7°
C2C3C4111.6°108.6°
C2C3H37108.4°109.6°
OC3C4109.2°109.6°
OC3H37109.3°109.6°
C3OH38109.5°114.0°
O1C1C109.6°109.9°
O1C1H41109.6°109.6°
C1O1H42109.5°114.0°
C1CC5112.1°108.6°
C1CH33108.8°109.7°
C1CH34108.8°109.8°
CC1H41108.3°109.5°
C3C4C5112.5°108.6°
C3C4H35108.7°109.6°
C3C4H36108.7°109.7°
C4C3H37108.0°109.6°
CC5C4119.4°118.8°
CC5C6120.0°120.6°
C5CH33108.8°109.6°
C5CH34108.9°109.6°
C4C5C6120.6°120.6°
C5C4H35108.7°109.7°
C5C4H36108.7°109.6°
C5C6C7120.7°120.0°
C5C6H32119.6°120.0°
C6C7C8119.8°120.0°
C6C7H31120.1°120.0°
C7C6H32119.7°120.0°
C7C8C14121.4°122.3°
C7C8C10121.6°122.4°
C8C7H31120.1°120.0°
C14C8C10117.0°115.3°
C8C14C13112.5°110.8°
C8C14H29108.7°109.3°
C8C14H30108.7°109.1°
C8C10C15118.4°116.7°
C8C10C11109.2°105.5°
C8C10H21108.1°111.1°
C10C15C16103.5°102.7°
C15C10C11105.2°101.3°
C10C15H19110.9°110.7°
C10C15H20110.9°110.8°
C15C10H21107.8°110.8°
C15C16C17107.2°106.3°
C15C16H17110.1°110.1°
C15C16H18110.0°110.1°
C16C15H19111.0°110.8°
C16C15H20110.9°110.7°
C18C11C10111.1°109.2°
C18C11C17110.6°109.2°
C18C11C12110.1°108.8°
C11C18H22109.5°109.5°
C11C18H23109.4°109.4°
C11C18H24109.5°109.5°
C14C13C12115.0°111.8°
C14C13H27108.1°109.0°
C14C13H28108.1°109.0°
C13C14H29108.7°109.2°
C13C14H30108.7°109.2°
C10C11C17101.5°103.1°
C10C11C12106.5°107.6°
C11C10H21107.8°110.9°
C16C17C11104.4°105.1°
C16C17C19112.3°110.3°
C16C17H16108.7°110.3°
C17C16H17110.0°110.1°
C17C16H18110.0°110.1°
C17C11C12116.6°118.5°
C11C17C19113.6°110.3°
C11C17H16108.8°110.3°
C11C12C13108.9°107.5°
C11C12H25109.6°109.8°
C11C12H26109.6°109.8°
C13C12H25109.6°109.9°
C13C12H26109.6°109.9°
C12C13H27108.0°109.0°
C12C13H28108.1°109.0°
C17C19C21111.2°109.5°
C17C19C20110.9°109.5°
C17C19H12107.9°109.5°
C19C17H16108.8°110.3°
O2C23C22109.4°109.5°
C23O2H1109.5°114.0°
O2C23H2109.5°109.5°
O2C23H3109.5°109.5°
C23C22C21111.2°109.5°
C22C23H2109.5°109.5°
C22C23H3109.5°109.5°
C23C22H4109.1°109.5°
C23C22H5109.0°109.4°
C21C19C20110.7°109.5°
C19C21C22110.6°109.5°
C19C21C24110.7°109.5°
C19C21H6108.7°109.5°
C21C19H12108.0°109.4°
C20C19H12108.0°109.5°
C19C20H13109.5°109.4°
C19C20H14109.5°109.5°
C19C20H15109.5°109.5°
C22C21C24109.4°109.5°
C21C22H4109.1°109.5°
C21C22H5109.0°109.5°
C22C21H6108.7°109.5°
C21C24C25111.0°109.5°
C24C21H6108.7°109.4°
C21C24H7109.1°109.5°
C21C24H8109.1°109.4°
C25C24H7109.1°109.5°
C25C24H8109.0°109.5°
C24C25H9109.5°109.5°
C24C25H10109.5°109.5°
C24C25H11109.4°109.5°
H2C23H3109.5°109.4°
H4C22H5109.5°109.4°
H7C24H8109.5°109.4°
H9C25H10109.5°109.5°
H9C25H11109.5°109.5°
H10C25H11109.5°109.4°
H13C20H14109.4°109.5°
H13C20H15109.5°109.5°
H14C20H15109.5°109.5°
H17C16H18109.5°110.1°
H19C15H20109.5°110.8°
H22C18H23109.5°109.5°
H22C18H24109.4°109.5°
H23C18H24109.5°109.4°
H25C12H26109.5°109.8°
H27C13H28109.5°109.0°
H29C14H30109.5°109.3°
H33CH34109.4°109.6°
H35C4H36109.5°109.6°
H39C9H40120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C9C2C1C3179.9°179.7°
C9C2C3O8.5°4.9°
C9C2C1O1110.0°115.3°
C9C2C1C128.7°124.7°
C9C2C3C4130.1°124.7°
C9C2C3H37111.1°115.5°
C2C9H39H40180.0°180.0°
C9C2C1H419.6°5.1°
C1C2C3O171.4°175.4°
C2C1O1C122.3°119.3°
C2C1O1H41119.1°120.3°
C2C1CH41119.3°119.7°
C1C2C3C449.9°55.5°
C2C1CC545.0°49.6°
C2C1CH33165.4°70.2°
C2C1CH3475.4°169.4°
C1C2C3H3769.0°64.2°
C1C2C9H39179.9°0.0°
C1C2C9H400.1°180.0°
C2C1O1H42180.0°60.0°
C2C3OC4123.0°119.2°
C2C3OH37119.0°120.4°
C3C2C1O170.0°64.5°
C3C2C1C51.2°55.6°
C2C3C4H37119.0°119.7°
C2C3C4C542.4°49.5°
C2C3C4H3578.1°169.2°
C2C3C4H36162.8°70.3°
C2C3OH38180.0°60.8°
C3C2C9H390.0°179.7°
C3C2C9H40180.0°0.3°
C3C2C1H41170.3°175.2°
OC3C4H37118.8°120.4°
OC3C4C5164.6°169.4°
OC3C4H3544.1°70.9°
OC3C4H3675.0°49.6°
O1C1CH41119.5°120.4°
O1C1CC576.2°70.3°
O1C1CH3344.2°169.9°
O1C1CH34163.4°49.5°
C1CC5H33120.4°119.8°
C1CC5H34120.4°119.9°
C1CC5C444.3°55.1°
C1CC5C6136.1°124.7°
C1CH33H34118.8°120.5°
CC1O1H4257.7°179.3°
C3C4C5C42.9°55.0°
C3C4C5H35120.4°119.7°
C3C4C5H36120.5°119.8°
C3C4C5C6137.5°124.7°
C3C4H35H36118.6°120.5°
C4C3OH3857.0°180.0°
CC5C4C6179.6°179.8°
CC5C6C7179.8°173.9°
CC5C6H320.2°6.2°
C5CH33H34118.9°120.3°
CC5C4H3577.5°174.7°
CC5C4H36163.4°64.8°
C5CC1H41164.3°169.2°
C4C5C6C70.2°5.9°
C4C5C6H32179.8°174.1°
C4C5CH33164.7°64.7°
C4C5CH3476.1°175.0°
C5C4H35H36118.6°120.4°
C5C4C3H3776.6°70.3°
C5C6C7H32180.0°180.0°
C5C6C7C8138.3°174.6°
C5C6C7H3141.7°5.4°
C6C5CH3315.7°115.5°
C6C5CH34103.5°4.8°
C6C5C4H35102.1°5.0°
C6C5C4H3617.0°115.4°
C6C7C8H31180.0°180.0°
C6C7C8C140.1°0.0°
C6C7C8C10180.0°180.0°
C7C8C14C10180.0°179.9°
C7C8C10C156.9°10.3°
C7C8C14C13142.8°129.8°
C7C8C10C11127.1°121.9°
C7C8C10H21115.9°117.9°
C7C8C14H2996.7°9.4°
C7C8C14H3022.4°110.0°
C8C7C6H3241.7°5.3°
C14C8C10C15173.1°169.6°
C8C14C13H29120.4°120.4°
C8C14C13H30120.5°120.2°
C14C8C10C1152.9°58.1°
C8C14C13C1236.7°48.5°
C14C8C10H2164.2°62.1°
C8C14C13H27157.5°72.1°
C8C14C13H2884.1°169.1°
C8C14H29H30118.6°119.3°
C14C8C7H31179.9°180.0°
C8C10C15C11122.2°114.0°
C8C10C15H21122.9°128.4°
C8C10C15C16154.4°156.2°
C8C10C11C1853.5°51.5°
C10C8C14C1337.1°50.1°
C8C10C11H21117.2°120.4°
C8C10C11C17171.1°167.5°
C8C10C11C1266.4°66.5°
C8C10C15H1935.3°85.4°
C8C10C15H2086.6°38.0°
C10C8C14H2983.3°170.5°
C10C8C14H30157.6°70.1°
C10C8C7H310.1°0.0°
C10C15C16H19119.1°118.3°
C10C15C16H20119.0°118.3°
C15C10C11C1874.5°70.6°
C15C10C11H21114.8°117.6°
C10C15C16C178.6°24.2°
C15C10C11C1743.1°45.5°
C15C10C11C12165.6°171.5°
C10C15C16H17128.2°95.0°
C10C15C16H18111.0°143.4°
C10C15H19H20122.7°123.4°
C16C15C10C1132.1°42.2°
C15C16C17H17119.7°119.2°
C15C16C17H18119.7°119.2°
C15C16C17C1117.5°3.9°
C15C16C17C19141.1°122.9°
C15C16C17H1698.5°115.0°
C15C16H17H18121.1°121.5°
C16C15H19H20122.8°123.3°
C16C15C10H2182.7°75.4°
C18C11C10C17117.6°116.0°
C18C11C10C12119.9°118.0°
C18C11C17C1681.3°85.9°
C18C11C17C12126.7°125.3°
C18C11C12C1354.0°50.1°
C18C11C17C1941.4°33.1°
C18C11C17H16162.7°155.2°
C18C11C10H21170.7°171.8°
C11C18H22H23120.0°120.0°
C11C18H22H24120.0°120.0°
C11C18H23H24120.0°120.0°
C18C11C12H2565.9°69.4°
C18C11C12H26173.9°169.7°
C14C13C12C1152.7°59.1°
C14C13C12H27120.8°120.6°
C14C13C12H28120.8°120.5°
C14C13C12H25172.6°178.6°
C14C13C12H2667.2°60.5°
C14C13H27H28117.5°118.8°
C13C14H29H30118.6°119.4°
C10C11C17C1636.7°30.1°
C10C11C17C12115.3°118.7°
C10C11C12C1366.6°68.1°
C10C11C17C19159.4°149.1°
C10C11C17H1679.3°88.8°
C11C10C15H1986.9°160.6°
C11C10C15H20151.2°76.0°
C10C11C18H22180.0°66.4°
C10C11C18H2360.0°173.6°
C10C11C18H2460.0°53.6°
C10C11C12H25173.5°172.4°
C10C11C12H2653.4°51.5°
C16C17C11C19122.7°119.0°
C16C17C11H16116.0°118.9°
C16C17C11C12152.0°148.8°
C16C17C19H16120.4°122.1°
C16C17C19C2166.4°57.2°
C16C17C19C20170.0°177.2°
C16C17C19H1251.8°62.8°
C17C16H17H18121.0°121.6°
C17C16C15H19110.4°142.5°
C17C16C15H20127.6°94.1°
C17C11C12C13179.0°175.6°
C11C17C19H16121.4°122.1°
C11C17C19C21175.3°172.9°
C11C17C19C2051.7°67.0°
C11C17C19H1266.4°53.0°
C11C17C16H17102.1°123.1°
C11C17C16H18137.2°115.3°
C17C11C10H2171.7°72.1°
C17C11C18H2268.0°45.7°
C17C11C18H23172.0°74.3°
C17C11C18H2452.0°165.7°
C17C11C12H2561.1°56.1°
C17C11C12H2659.1°64.8°
C11C12C13H25119.9°119.5°
C11C12C13H26119.9°119.5°
C12C11C17C1985.3°92.2°
C12C11C17H1636.0°29.8°
C12C11C10H2150.8°53.9°
C12C11C18H2262.2°176.4°
C12C11C18H2357.8°56.4°
C12C11C18H24177.8°63.6°
C11C12H25H26120.2°120.9°
C11C12C13H27173.5°61.5°
C11C12C13H2868.1°179.6°
C13C12H25H26120.3°121.0°
C12C13H27H28117.5°118.8°
C12C13C14H2983.7°168.9°
C12C13C14H30157.2°71.6°
C17C19C21C20123.8°120.1°
C17C19C21H12118.2°120.0°
C17C19C20H12118.1°120.0°
C17C19C21C22177.4°177.6°
C17C19C21C2461.2°62.4°
C17C19C21H658.1°57.6°
C17C19C20H13180.0°60.0°
C17C19C20H1460.0°60.0°
C17C19C20H1560.0°180.0°
C19C17C16H1721.4°117.9°
C19C17C16H1899.3°3.6°
O2C23C22H2120.0°120.0°
O2C23C22H3120.0°120.0°
O2C23C22C21175.7°174.7°
O2C23H2H3120.0°120.0°
O2C23C22H455.5°65.2°
O2C23C22H564.0°54.8°
C23C22C21C19105.9°65.1°
C23C22C21H4120.3°120.1°
C23C22C21H5120.2°120.0°
C23C22C21C24131.9°174.9°
C22C23O2H1180.0°180.0°
C22C23H2H3120.0°120.0°
C23C22H4H5119.2°120.0°
C23C22C21H613.4°54.9°
C21C19C20H12118.0°119.9°
C19C21C22C24122.2°120.0°
C19C21C22H6119.3°120.0°
C19C21C24H6119.3°120.0°
C19C21C24C25142.9°173.6°
C19C21C22H414.4°55.0°
C19C21C22H5133.9°174.9°
C19C21C24H722.7°53.6°
C19C21C24H896.9°66.3°
C21C19C20H1356.1°60.0°
C21C19C20H1463.9°180.0°
C21C19C20H15176.2°59.9°
C21C19C17H1654.0°64.9°
C20C19C21C2258.8°62.3°
C20C19C21C2462.6°57.7°
C20C19C21H6178.1°177.7°
C19C20H13H14120.0°120.0°
C19C20H13H15120.0°120.0°
C19C20H14H15120.0°120.0°
C20C19C17H1669.6°55.1°
C22C21C24H6118.5°120.0°
C22C21C24C2595.0°66.4°
C21C22C23H264.3°54.7°
C21C22C23H355.7°65.3°
C21C22H4H5119.2°120.0°
C22C21C24H7144.8°173.6°
C22C21C24H825.2°53.7°
C22C21C19H1259.2°57.7°
C21C24C25H7120.2°120.0°
C21C24C25H8120.2°120.0°
C24C21C22H4107.8°65.0°
C24C21C22H511.7°54.9°
C21C24H7H8119.3°119.9°
C21C24C25H9180.0°175.5°
C21C24C25H1060.0°55.4°
C21C24C25H1160.0°64.5°
C24C21C19H12179.4°177.7°
C25C24C21H623.6°53.7°
C25C24H7H8119.2°120.0°
C24C25H9H10120.0°120.0°
C24C25H9H11120.0°120.0°
C24C25H10H11120.0°119.9°
H1O2C23H260.0°60.0°
H1O2C23H360.0°59.9°
H2C23C22H4175.5°174.7°
H2C23C22H556.0°65.3°
H3C23C22H464.5°54.8°
H3C23C22H5176.0°174.8°
H4C22C21H6133.7°175.0°
H5C22C21H6106.8°65.1°
H6C21C24H796.6°66.4°
H6C21C24H8143.8°173.7°
H6C21C19H1260.1°62.3°
H7C24C25H959.8°64.5°
H7C24C25H10179.8°175.5°
H7C24C25H1160.2°55.5°
H8C24C25H959.7°55.5°
H8C24C25H1060.3°64.6°
H8C24C25H11179.7°175.5°
H9C25H10H11120.0°120.0°
H12C19C20H1361.9°180.0°
H12C19C20H14178.1°60.0°
H12C19C20H1558.1°60.0°
H12C19C17H16172.2°175.1°
H13C20H14H15120.0°120.1°
H16C17C16H17141.8°4.2°
H16C17C16H1821.2°125.7°
H17C16C15H199.2°23.3°
H17C16C15H20112.7°146.7°
H18C16C15H19129.9°98.3°
H18C16C15H208.0°25.1°
H19C15C10H21158.2°43.0°
H20C15C10H2136.3°166.4°
H22C18H23H24120.0°120.1°
H25C12C13H2766.6°58.0°
H25C12C13H2851.8°60.9°
H26C12C13H2753.6°178.9°
H26C12C13H28172.0°60.1°
H27C13C14H2937.0°48.3°
H27C13C14H3082.0°167.7°
H28C13C14H29155.4°70.5°
H28C13C14H3036.4°48.9°
H31C7C6H32138.3°174.7°
H33CC1H4175.3°49.5°
H34CC1H4143.9°71.0°
H35C4C3H37162.9°49.5°
H36C4C3H3743.8°169.9°
H37C3OH3860.9°59.6°
H41C1O1H4261.0°60.4°

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon