Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YSB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O34S31doub1.42Å1.48Å
O33S31doub1.42Å1.47Å
S31C32sing1.81Å1.82Å
S31C30sing1.81Å1.83Å
C30C26sing1.51Å1.54Å
C26C25doub1.38Å1.32ÅAromatic
C26C27sing1.39Å1.52ÅAromatic
F28C27sing1.35Å1.36Å
C25C24sing1.38Å1.53ÅAromatic
C27C29doub1.38Å1.31ÅAromatic
C24C23doub1.40Å1.32ÅAromatic
C29C23sing1.40Å1.52ÅAromatic
C23C22sing1.48Å1.53Å
O21C19doub1.22Å1.26Å
C19C18sing1.47Å1.49Å
C19O20sing1.35Å1.28Å
C22C18doub1.38Å1.36ÅAromatic
C22C35sing1.47Å1.49ÅAromatic
C18N17sing1.38Å1.30ÅAromatic
C35C36doub1.40Å1.38ÅAromatic
C35C16sing1.41Å1.46ÅAromatic
C36C37sing1.37Å1.42ÅAromatic
N17C16sing1.37Å1.37ÅAromatic
C16C15doub1.39Å1.36ÅAromatic
C37C38doub1.39Å1.43ÅAromatic
O10C09doub1.22Å1.18Å
C15C38sing1.38Å1.41ÅAromatic
C15C13sing1.51Å1.55Å
C09O08sing1.34Å1.42Å
C09N12sing1.35Å1.36Å
O08C07sing1.35Å1.52Å
C13N12sing1.46Å1.46Å
C13C14sing1.53Å1.54Å
N12C11sing1.39Å1.38Å
C07C11doub1.33Å1.38Å
C07C06sing1.51Å1.55Å
C06C05sing1.53Å1.55Å
C04C02sing1.53Å1.54Å
C04C03sing1.53Å1.54Å
C05C02sing1.53Å1.56Å
C02N01sing1.47Å1.46Å
C02C03sing1.53Å1.54Å
C13H131sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H143sing1.09Å1.10Å
C11H111sing1.08Å1.08Å
C03H032sing1.09Å1.10Å
C03H031sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C04H042sing1.09Å1.10Å
C05H051sing1.09Å1.10Å
C05H052sing1.09Å1.10Å
C06H062sing1.09Å1.10Å
C06H061sing1.09Å1.10Å
C24H241sing1.08Å1.08Å
C25H251sing1.08Å1.08Å
C29H291sing1.08Å1.08Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
C32H321sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C32H323sing1.09Å1.10Å
C36H361sing1.08Å1.08Å
C37H371sing1.08Å1.08Å
C38H381sing1.08Å1.08Å
N01H1sing1.01Å1.00Å
N01H012sing1.01Å1.00Å
N17H171sing0.97Å1.00Å
O20H2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O34S31O33109.3°119.2°
O34S31C32108.1°108.6°
O34S31C30111.0°108.6°
O33S31C32111.3°108.6°
O33S31C30107.8°108.6°
C32S31C30109.4°101.9°
S31C32H321109.5°109.5°
S31C32H322109.5°109.5°
S31C32H323109.4°109.5°
S31C30C26109.1°109.5°
S31C30H301109.6°109.4°
S31C30H302109.6°109.5°
C30C26C25120.8°119.9°
C30C26C27119.5°119.9°
C26C30H301109.5°109.5°
C26C30H302109.6°109.5°
C25C26C27119.7°120.2°
C26C25C24120.1°120.2°
C26C25H251119.9°119.9°
C26C27F28120.6°119.9°
C26C27C29120.7°120.1°
F28C27C29118.7°119.9°
C25C24C23119.1°119.9°
C25C24H241120.5°120.0°
C24C25H251120.0°119.9°
C27C29C23119.3°119.8°
C27C29H291120.3°120.1°
C24C23C29121.0°119.7°
C24C23C22122.0°120.1°
C23C24H241120.4°120.1°
C29C23C22117.0°120.1°
C23C29H291120.3°120.1°
C23C22C18128.3°126.7°
C23C22C35121.7°126.8°
O21C19C18115.1°120.0°
O21C19O20127.4°120.0°
C18C19O20117.4°120.0°
C19C18C22129.8°125.5°
C19C18N17123.0°125.5°
C19O20H2109.5°114.0°
C18C22C35109.9°106.5°
C22C18N17107.2°109.0°
C22C35C36137.7°133.6°
C22C35C16101.7°106.4°
C18N17C16115.5°110.1°
C18N17H171122.3°124.9°
C36C35C16120.5°120.0°
C35C36C37117.9°119.8°
C35C36H361121.1°120.1°
C35C16N17105.7°108.0°
C35C16C15121.4°119.2°
C36C37C38121.3°120.5°
C37C36H361121.1°120.1°
C36C37H371119.4°119.8°
N17C16C15132.9°132.8°
C16N17H171122.3°125.0°
C16C15C38119.0°119.8°
C16C15C13117.1°120.1°
C37C38C15119.9°120.7°
C38C37H371119.4°119.7°
C37C38H381120.0°119.6°
O10C09O08123.0°126.1°
O10C09N12129.6°126.0°
C38C15C13123.9°120.1°
C15C38H381120.1°119.7°
C15C13N12110.3°109.5°
C15C13C14109.4°109.5°
C15C13H131107.1°109.5°
O08C09N12107.4°107.9°
C09O08C07104.0°108.7°
C09N12C13122.0°126.4°
C09N12C11114.3°107.3°
O08C07C11108.2°108.5°
O08C07C06122.0°125.8°
N12C13C14114.2°109.5°
C13N12C11123.6°126.4°
N12C13H131108.2°109.5°
C14C13H131107.2°109.4°
C13C14H142109.5°109.4°
C13C14H141109.5°109.5°
C13C14H143109.5°109.5°
N12C11C07106.0°107.6°
N12C11H111127.0°126.2°
C11C07C06129.7°125.7°
C07C11H111127.0°126.2°
C07C06C05107.0°109.5°
C07C06H062110.1°109.5°
C07C06H061110.1°109.5°
C06C05C02114.1°109.4°
C06C05H051108.3°109.5°
C06C05H052108.3°109.5°
C05C06H062110.1°109.4°
C05C06H061110.1°109.5°
C02C04C0360.0°60.0°
C04C02C05119.4°117.5°
C04C02N01114.3°117.5°
C04C02C0360.0°60.0°
C02C04H041120.0°117.5°
C02C04H042120.0°117.5°
C04C03C0260.0°60.0°
C04C03H032120.0°117.5°
C04C03H031120.0°117.5°
C03C04H041120.0°117.5°
C03C04H042120.0°117.5°
C05C02N01118.1°115.6°
C05C02C03116.2°117.5°
C02C05H051108.3°109.5°
C02C05H052108.3°109.4°
N01C02C03115.7°117.5°
C02N01H1109.5°111.0°
C02N01H012109.5°111.0°
C02C03H032120.0°117.5°
C02C03H031120.0°117.5°
H142C14H141109.4°109.5°
H142C14H143109.5°109.5°
H141C14H143109.5°109.5°
H032C03H031109.5°115.5°
H041C04H042109.4°115.5°
H051C05H052109.5°109.5°
H062C06H061109.5°109.5°
H301C30H302109.5°109.4°
H321C32H322109.5°109.5°
H321C32H323109.5°109.5°
H322C32H323109.5°109.4°
H1N01H012109.5°111.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O34S31O33C32119.3°125.0°
O34S31O33C30120.8°124.9°
O34S31C32C30121.0°114.5°
O34S31C30C26172.1°65.5°
O34S31C30H30168.0°54.5°
O34S31C30H30252.2°174.5°
O34S31C32H321180.0°65.5°
O34S31C32H32260.0°54.5°
O34S31C32H32360.0°174.5°
O33S31C32C30119.0°114.5°
O33S31C30C2668.2°65.5°
O33S31C30H30151.7°174.5°
O33S31C30H302171.9°54.6°
O33S31C32H32160.0°65.5°
O33S31C32H322180.0°174.5°
O33S31C32H32360.0°54.5°
C32S31C30C2652.9°180.0°
C32S31C30H301172.8°60.0°
C32S31C30H30267.0°60.0°
S31C32H321H322120.0°120.0°
S31C32H321H323120.0°120.0°
S31C32H322H323120.0°120.0°
S31C30C26H301119.9°120.0°
S31C30C26H302119.9°120.0°
S31C30C26C2593.7°90.0°
S31C30C26C2785.0°90.0°
S31C30H301H302120.2°120.0°
C30S31C32H32159.0°180.0°
C30S31C32H32261.0°60.0°
C30S31C32H323179.0°60.0°
C30C26C25C27178.7°180.0°
C30C26C27F280.1°0.0°
C30C26C25C24179.6°180.0°
C30C26C27C29179.6°179.8°
C30C26C25H2510.4°0.0°
C26C30H301H302120.2°120.1°
C25C26C27F28178.8°180.0°
C26C25C24H251180.0°179.9°
C25C26C27C290.9°0.2°
C26C25C24C231.9°0.0°
C26C25C24H241178.1°179.9°
C25C26C30H30126.2°150.0°
C25C26C30H302146.4°30.0°
C26C27F28C29179.7°179.8°
C27C26C25C240.9°0.0°
C26C27C29C231.6°0.5°
C27C26C25H251179.1°179.9°
C26C27C29H291178.4°180.0°
C27C26C30H301155.0°30.0°
C27C26C30H30234.9°150.0°
F28C27C29C23178.1°179.7°
F28C27C29H2911.9°0.2°
C25C24C23H241180.0°179.9°
C25C24C23C292.6°0.3°
C25C24C23C22178.9°179.9°
C27C29C23C242.6°0.6°
C27C29C23H291180.0°179.5°
C27C29C23C22179.1°179.8°
C24C23C29C22176.5°179.6°
C24C23C22C18137.8°65.0°
C24C23C22C3548.0°115.0°
C23C24C25H251178.1°179.9°
C24C23C29H291177.4°180.0°
C29C23C22C1845.8°115.4°
C29C23C22C35128.5°64.7°
C29C23C24H241177.4°179.8°
C23C22C18C197.3°0.0°
C23C22C18C35174.8°180.0°
C23C22C18N17176.0°180.0°
C23C22C35C364.9°0.0°
C23C22C35C16178.1°180.0°
C22C23C24H2411.1°0.1°
C22C23C29H2910.9°0.3°
O21C19C18O20176.8°180.0°
O21C19C18C2230.0°0.0°
O21C19C18N17146.2°179.9°
O21C19O20H20.0°0.0°
C19C18C22N17176.7°180.0°
C19C18C22C35177.9°180.0°
C19C18N17C16175.8°180.0°
C19C18N17H1714.2°0.1°
C18C19O20H2176.3°180.0°
O20C19C18C22153.2°180.0°
O20C19C18N1730.6°0.0°
C18C22C35C36179.9°180.0°
C18C22C35C162.9°0.0°
C22C18N17C161.1°0.0°
C22C18N17H171178.9°179.9°
C35C22C18N171.2°0.0°
C22C35C36C16176.6°179.9°
C22C35C36C37177.3°180.0°
C22C35C16N173.3°0.0°
C22C35C16C15178.1°180.0°
C22C35C36H3612.7°0.1°
C18N17C16C353.0°0.0°
C18N17C16H171180.0°179.9°
C18N17C16C15178.7°180.0°
C35C36C37H361180.0°179.9°
C36C35C16N17179.0°180.0°
C36C35C16C150.4°0.1°
C35C36C37C380.9°0.0°
C35C36C37H371179.1°180.0°
C16C35C36C370.7°0.1°
C35C16N17C15178.3°179.9°
C35C16C15C380.3°0.0°
C35C16C15C13178.9°179.7°
C16C35C36H361179.3°180.0°
C35C16N17H171177.0°180.0°
C36C37C38H371180.0°179.9°
C36C37C38C150.8°0.0°
C36C37C38H381179.3°179.8°
N17C16C15C38178.4°179.9°
N17C16C15C130.8°0.2°
C16C15C38C370.5°0.1°
C16C15C38C13179.2°179.7°
C16C15C13N1293.6°76.1°
C16C15C13C14139.9°163.8°
C16C15C13H13124.0°43.9°
C16C15C38H381179.6°179.8°
C15C16N17H1711.3°0.1°
C37C38C15H381180.0°179.8°
C37C38C15C13178.7°179.8°
C38C37C36H361179.1°180.0°
O10C09O08N12178.2°180.0°
O10C09O08C07179.9°180.0°
O10C09N12C133.5°0.2°
O10C09N12C11179.7°179.8°
C38C15C13N1287.2°104.2°
C38C15C13C1439.3°15.9°
C38C15C13H131155.2°135.8°
C15C38C37H371179.3°179.9°
C15C13N12C0987.1°58.4°
C15C13N12C14123.8°120.0°
C15C13N12H131116.9°120.0°
C15C13C14H131115.9°120.0°
C15C13N12C1188.7°121.5°
C15C13C14H142180.0°60.0°
C15C13C14H14160.0°60.0°
C15C13C14H14360.0°180.0°
C13C15C38H3811.2°0.1°
O08C09N12C13178.4°179.8°
O08C09N12C112.3°0.2°
C09O08C07C110.7°0.2°
C09O08C07C06179.8°179.8°
N12C09O08C071.7°0.0°
C09N12C13C11175.8°180.0°
C09N12C13C14149.2°61.6°
C09N12C11C071.8°0.3°
C09N12C13H13129.8°178.5°
C09N12C11H111178.2°179.9°
O08C07C11N120.6°0.3°
O08C07C11C06179.1°180.0°
O08C07C06C0541.8°85.0°
O08C07C11H111179.4°179.9°
O08C07C06H06277.8°155.0°
O08C07C06H061161.5°35.0°
N12C13C14H131119.9°120.0°
C13N12C11C07177.9°179.7°
N12C13C14H14255.7°60.0°
N12C13C14H14164.2°180.0°
N12C13C14H143175.7°60.0°
C13N12C11H1112.1°0.0°
C14C13N12C1135.1°118.4°
C13C14H142H141120.0°120.0°
C13C14H142H143120.0°120.0°
C13C14H141H143120.0°120.0°
N12C11C07H111180.0°179.6°
N12C11C07C06178.5°179.7°
C11N12C13H131154.4°1.5°
C11C07C06C05137.1°95.0°
C11C07C06H062103.3°24.9°
C11C07C06H06117.5°144.9°
C07C06C05H062119.6°120.0°
C07C06C05H061119.6°120.1°
C07C06C05C02175.2°180.0°
C06C07C11H1111.6°0.1°
C07C06C05H05164.1°60.0°
C07C06C05H05254.5°60.0°
C07C06H062H061121.1°120.1°
C06C05C02C0422.9°116.3°
C06C05C02H051120.7°120.0°
C06C05C02H052120.7°120.0°
C06C05C02N01169.7°29.4°
C06C05C02C0346.0°175.1°
C06C05H051H052117.9°120.1°
C05C06H062H061121.1°120.0°
C02C04C03H041109.5°107.5°
C02C04C03H042109.5°107.5°
C04C02C05N01146.9°145.7°
C04C02C05C0368.8°68.6°
C04C02N01C0367.0°68.6°
C02C04C03H032109.5°107.5°
C02C04C03H031109.5°107.5°
C02C04H041H042144.8°145.7°
C04C02C05H051143.6°123.7°
C04C02C05H05297.8°3.7°
C04C02N01H1180.0°111.4°
C04C02N01H01260.0°12.6°
C04C03H032H031144.7°145.7°
C03C04H041H042144.7°145.7°
C05C02N01C03144.5°145.7°
C05C02C03H032140.2°0.0°
C05C02C03H0311.0°145.0°
C05C02C04H041145.5°145.1°
C05C02C04H0424.4°0.0°
C02C05H051H052117.9°120.0°
C02C05C06H06255.6°60.0°
C02C05C06H06165.2°59.9°
C05C02N01H131.5°34.3°
C05C02N01H01288.5°158.3°
N01C02C03H0325.0°145.0°
N01C02C03H031146.1°0.1°
N01C02C04H0412.6°0.0°
N01C02C04H042143.7°145.0°
N01C02C05H05169.6°90.6°
N01C02C05H05249.1°149.4°
C02N01H1H012120.0°124.0°
C02C03H032H031144.8°145.6°
C03C02C05H05174.7°55.1°
C03C02C05H052166.6°64.9°
C03C02N01H1113.0°180.0°
C03C02N01H012127.0°56.0°
H131C13C14H14264.1°179.9°
H131C13C14H141175.9°60.0°
H131C13C14H14355.9°60.0°
H142C14H141H143120.0°120.1°
H032C03C04H0410.0°145.0°
H032C03C04H042141.0°0.0°
H031C03C04H041141.0°0.0°
H031C03C04H0420.0°145.0°
H051C05C06H062176.3°180.0°
H051C05C06H06155.5°60.0°
H052C05C06H06265.1°59.9°
H052C05C06H061174.1°179.9°
H241C24C25H2511.9°0.0°
H321C32H322H323120.0°120.0°
H361C36C37H3710.8°0.1°
H371C37C38H3810.7°0.3°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon