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YRL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O10C09sing1.43Å1.37Å
C09C08sing1.53Å1.49Å
C08C01sing1.51Å1.49Å
C01C02doub1.38Å1.39ÅAromatic
C01C03sing1.38Å1.39ÅAromatic
C02C04sing1.38Å1.36ÅAromatic
C03C05doub1.38Å1.38ÅAromatic
C04C06doub1.39Å1.37ÅAromatic
C05C06sing1.39Å1.38ÅAromatic
C06O07sing1.36Å1.41Å
C02H021sing1.08Å1.08Å
C03H031sing1.08Å1.08Å
C04H041sing1.08Å1.08Å
C05H051sing1.08Å1.08Å
O07H071sing0.97Å0.95Å
C08H082sing1.09Å1.10Å
C08H081sing1.09Å1.10Å
C09H092sing1.09Å1.10Å
C09H091sing1.09Å1.10Å
O10H101sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O10C09C08107.3°109.5°
O10C09H092110.0°109.5°
O10C09H091110.0°109.5°
C09O10H101109.5°114.0°
C09C08C01110.6°109.5°
C09C08H082109.2°109.5°
C09C08H081109.2°109.5°
C08C09H092110.0°109.5°
C08C09H091110.0°109.5°
C08C01C02118.0°120.0°
C08C01C03120.4°119.9°
C01C08H082109.2°109.5°
C01C08H081109.2°109.5°
C02C01C03121.6°120.1°
C01C02C04119.1°120.1°
C01C02H021120.5°120.0°
C01C03C05118.5°120.1°
C01C03H031120.8°120.0°
C02C04C06119.5°119.9°
C04C02H021120.4°120.0°
C02C04H041120.2°120.0°
C03C05C06118.8°119.9°
C05C03H031120.8°120.0°
C03C05H051120.6°120.1°
C04C06C05122.5°119.9°
C04C06O07112.0°120.0°
C06C04H041120.2°120.0°
C05C06O07125.4°120.0°
C06C05H051120.6°120.0°
C06O07H071109.5°114.0°
H082C08H081109.5°109.4°
H092C09H091109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O10C09C08H092119.7°120.0°
O10C09C08H091119.7°120.0°
O10C09C08C01159.8°180.0°
O10C09C08H08239.6°60.0°
O10C09C08H08180.1°60.0°
O10C09H092H091121.0°120.0°
C09C08C01H082120.2°120.0°
C09C08C01H081120.2°120.0°
C09C08C01C02175.7°90.0°
C09C08C01C033.6°90.3°
C09C08H082H081119.4°120.0°
C08C09H092H091121.0°120.0°
C08C09O10H101180.0°180.0°
C08C01C02C03179.3°179.7°
C08C01C02C04178.9°179.7°
C08C01C03C05179.6°179.7°
C08C01C02H0211.1°0.4°
C08C01C03H0310.4°0.3°
C01C08H082H081119.5°120.0°
C01C08C09H09280.6°60.0°
C01C08C09H09140.1°60.0°
C01C02C04H021180.0°179.9°
C02C01C03C051.1°0.0°
C01C02C04C061.6°0.0°
C02C01C03H031178.9°180.0°
C01C02C04H041178.4°179.9°
C02C01C08H08255.5°149.9°
C02C01C08H08164.1°30.0°
C03C01C02C041.8°0.0°
C01C03C05H031180.0°180.0°
C01C03C05C060.3°0.1°
C03C01C02H021178.3°179.9°
C01C03C05H051179.7°180.0°
C03C01C08H082123.8°29.8°
C03C01C08H081116.5°149.7°
C02C04C06H041180.0°180.0°
C02C04C06C050.8°0.0°
C02C04C06O07179.6°180.0°
C03C05C06C040.1°0.1°
C03C05C06H051180.0°180.0°
C03C05C06O07179.7°179.9°
C04C06C05O07179.5°180.0°
C06C04C02H021178.5°179.9°
C04C06C05H051179.9°180.0°
C04C06O07H071180.0°90.0°
C06C05C03H031179.7°180.0°
C05C06C04H041179.2°180.0°
C05C06O07H0710.4°90.0°
O07C06C04H0410.4°0.0°
O07C06C05H0510.3°0.0°
H021C02C04H0411.5°0.0°
H031C03C05H0510.3°0.0°
H082C08C09H092159.3°180.0°
H082C08C09H09180.1°60.0°
H081C08C09H09239.6°60.0°
H081C08C09H091160.3°180.0°
H092C09O10H10160.4°60.0°
H091C09O10H10160.3°60.0°

246704

PDB entries from 2025-12-24

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