Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

YQ9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.47Å1.51Å
N1C5sing1.47Å1.48Å
N1C26sing1.35Å1.41Å
C2C3sing1.54Å1.53Å
C3C4sing1.55Å1.58Å
C3C6sing1.53Å1.56Å
C4C5sing1.54Å1.53Å
C4C7sing1.54Å1.53Å
C6C7sing1.55Å1.57Å
C6C8sing1.54Å1.53Å
C7C10sing1.54Å1.52Å
C8N9sing1.47Å1.49Å
N9C10sing1.47Å1.46Å
N9C15sing1.35Å1.37Å
C15C16sing1.48Å1.51Å
C15O17doub1.22Å1.25Å
C16C18doub1.40Å1.41ÅAromatic
C16C20sing1.39Å1.41ÅAromatic
C18C19sing1.36Å1.36ÅAromatic
C19C22doub1.39Å1.40ÅAromatic
C20C21doub1.40Å1.42ÅAromatic
C21C22sing1.41Å1.45ÅAromatic
C21N25sing1.35Å1.41ÅAromatic
C22N23sing1.37Å1.37ÅAromatic
N23N24sing1.40Å1.40ÅAromatic
N24N25doub1.29Å1.29ÅAromatic
C26C27sing1.48Å1.50Å
C26O28doub1.22Å1.22Å
C27C29doub1.40Å1.40ÅAromatic
C27C31sing1.40Å1.41ÅAromatic
C29C30sing1.38Å1.40ÅAromatic
C30C33doub1.39Å1.40ÅAromatic
C30C40sing1.51Å1.50Å
C31N32doub1.32Å1.34ÅAromatic
N32C33sing1.32Å1.37ÅAromatic
C33O34sing1.35Å1.35Å
O34C35sing1.43Å1.40Å
C35C36sing1.53Å1.56Å
C36F37sing1.40Å1.33Å
C36F38sing1.40Å1.36Å
C36F39sing1.40Å1.35Å
C40C41sing1.53Å1.53Å
C40C42sing1.53Å1.54Å
C41C42sing1.53Å1.52Å
C10H49sing1.09Å1.10Å
C10H50sing1.09Å1.10Å
C18H51sing1.08Å1.08Å
C19H52sing1.08Å1.08Å
C20H53sing1.08Å1.08Å
C2H44sing1.09Å1.10Å
C2H43sing1.09Å1.10Å
C3H12sing1.09Å1.10Å
C4H11sing1.09Å1.10Å
C5H45sing1.09Å1.10Å
C5H46sing1.09Å1.10Å
C6H14sing1.09Å1.10Å
C7H13sing1.09Å1.10Å
C8H48sing1.09Å1.10Å
C8H47sing1.09Å1.10Å
N23H54sing0.97Å1.00Å
C29H55sing1.08Å1.08Å
C31H56sing1.08Å1.08Å
C35H57sing1.09Å1.10Å
C35H58sing1.09Å1.10Å
C40H59sing1.09Å1.10Å
C41H60sing1.09Å1.10Å
C41H61sing1.09Å1.10Å
C42H63sing1.09Å1.10Å
C42H62sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C5114.1°109.4°
C2N1C26121.3°125.3°
N1C2C3104.2°106.7°
N1C2H44110.8°110.1°
N1C2H43110.8°110.0°
C5N1C26124.6°125.3°
N1C5C4104.7°107.9°
N1C5H45110.7°109.8°
N1C5H46110.7°109.8°
N1C26C27122.0°120.0°
N1C26O28118.7°120.0°
C2C3C4106.6°103.7°
C2C3C6115.6°113.8°
C3C2H44110.8°110.0°
C3C2H43110.8°110.0°
C2C3H12114.6°115.0°
C4C3C689.3°87.2°
C3C4C5108.2°104.5°
C3C4C790.2°87.0°
C4C3H12113.8°116.6°
C3C4H11114.8°116.6°
C3C6C789.1°87.2°
C3C6C8117.6°113.9°
C6C3H12114.0°116.7°
C3C6H14113.6°115.8°
C5C4C7109.3°113.2°
C5C4H11115.7°115.0°
C4C5H45110.7°109.7°
C4C5H46110.7°109.8°
C4C7C691.0°87.1°
C4C7C10112.2°113.1°
C7C4H11115.7°116.8°
C4C7H13114.9°116.4°
C7C6C8106.0°104.5°
C6C7C10107.2°103.6°
C7C6H14113.5°116.4°
C6C7H13114.1°117.6°
C6C8N9100.4°107.9°
C8C6H14114.1°115.4°
C6C8H48111.7°109.8°
C6C8H47111.7°109.8°
C7C10N9102.6°106.7°
C7C10H49111.2°110.0°
C7C10H50111.2°110.0°
C10C7H13114.9°115.3°
C8N9C10112.2°109.4°
C8N9C15121.8°125.3°
N9C8H48111.7°109.8°
N9C8H47111.7°109.8°
C10N9C15126.0°125.3°
N9C10H49111.2°110.1°
N9C10H50111.1°110.0°
N9C15C16120.8°120.0°
N9C15O17118.6°120.0°
C16C15O17120.5°120.0°
C15C16C18116.6°119.9°
C15C16C20119.8°119.9°
C18C16C20123.6°120.3°
C16C18C19122.6°120.5°
C16C18H51118.7°119.8°
C16C20C21114.6°119.5°
C16C20H53122.7°120.2°
C18C19C22116.5°120.1°
C19C18H51118.7°119.7°
C18C19H52121.7°119.9°
C19C22C21121.9°120.2°
C19C22N23132.7°133.7°
C22C19H52121.8°120.0°
C20C21C22120.8°119.4°
C20C21N25132.2°133.0°
C21C20H53122.7°120.2°
C22C21N25107.0°107.6°
C21C22N23105.4°106.1°
C21N25N24107.9°110.1°
C22N23N24107.6°106.7°
C22N23H54126.2°126.7°
N23N24N25112.2°109.5°
N24N23H54126.2°126.6°
C27C26O28119.3°120.0°
C26C27C29127.0°120.5°
C26C27C31114.7°120.5°
C29C27C31118.2°119.0°
C27C29C30121.3°118.3°
C27C29H55119.4°120.8°
C27C31N32122.4°120.6°
C27C31H56118.8°119.7°
C29C30C33115.2°119.3°
C29C30C40124.1°120.3°
C30C29H55119.3°120.8°
C33C30C40120.7°120.4°
C30C33N32125.2°120.9°
C30C33O34116.3°119.5°
C30C40C41118.5°117.5°
C30C40C42120.6°117.5°
C30C40H59115.9°115.5°
C31N32C33117.6°121.8°
N32C31H56118.8°119.7°
N32C33O34118.5°119.5°
C33O34C35116.1°117.0°
O34C35C36100.6°109.5°
O34C35H57111.6°109.5°
O34C35H58111.6°109.5°
C35C36F37115.4°109.5°
C35C36F38108.4°109.5°
C35C36F39114.3°109.5°
C36C35H57111.7°109.4°
C36C35H58111.6°109.5°
F37C36F38106.6°109.5°
F37C36F39100.0°109.5°
F38C36F39111.8°109.4°
C41C40C4259.3°60.0°
C40C41C4260.6°60.0°
C41C40H59115.4°117.5°
C40C41H60119.9°117.5°
C40C41H61119.9°117.5°
C40C42C4160.1°60.0°
C42C40H59115.3°117.5°
C40C42H63120.0°117.5°
C40C42H62120.0°117.5°
C42C41H60119.9°117.4°
C42C41H61119.9°117.5°
C41C42H63120.0°117.5°
C41C42H62119.9°117.5°
H49C10H50109.5°110.0°
H44C2H43109.5°110.0°
H45C5H46109.4°109.8°
H48C8H47109.5°109.8°
H57C35H58109.5°109.5°
H60C41H61109.5°115.6°
H63C42H62109.5°115.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C5C26179.0°179.9°
N1C2C3H44119.1°119.3°
N1C2C3H43119.1°119.3°
N1C2C3C414.8°27.3°
N1C2C3C682.6°65.8°
C2N1C5C48.5°1.2°
C2N1C26C27179.2°174.8°
C2N1C26O280.2°5.2°
N1C2H44H43122.5°121.4°
N1C2C3H12141.6°155.8°
C2N1C5H45110.7°118.4°
C2N1C5H46127.8°120.8°
C5N1C2C315.1°18.1°
N1C5C4C31.5°15.9°
N1C5C4H45119.2°119.6°
N1C5C4H46119.3°119.6°
N1C5C4C798.4°108.9°
C5N1C26C270.2°5.1°
C5N1C26O28178.7°174.8°
C5N1C2H44134.2°137.4°
C5N1C2H43104.1°101.2°
N1C5C4H11128.8°113.2°
N1C5H45H46122.2°120.8°
C26N1C2C3165.9°161.8°
C26N1C5C4172.5°178.7°
N1C26C27O28179.0°179.9°
N1C26C27C2979.2°8.1°
N1C26C27C31101.5°172.2°
C26N1C2H4446.7°42.6°
C26N1C2H4375.0°78.8°
C26N1C5H4568.3°61.7°
C26N1C5H4653.2°59.1°
C2C3C4C6116.6°113.9°
C2C3C4H12127.4°127.5°
C2C3C6H12136.0°137.7°
C2C3C4C510.5°25.9°
C2C3C4C7121.0°139.1°
C2C3C6C7112.4°128.9°
C2C3C6C8139.9°126.5°
C3C2H44H43122.4°121.3°
C2C3C4H11120.4°102.3°
C2C3C6H143.0°10.8°
C4C3C6H12115.9°118.5°
C3C4C5C796.9°93.0°
C3C4C5H11130.4°129.1°
C3C4C7H11117.9°118.4°
C4C3C6C74.3°25.1°
C4C3C6C8112.0°129.7°
C3C4C7C10104.6°78.6°
C4C3C2H44134.0°146.6°
C4C3C2H43104.3°92.0°
C3C4C5H45120.8°135.5°
C3C4C5H46117.7°103.7°
C4C3C6H14111.1°93.0°
C3C4C7H13121.6°144.5°
C6C3C4C5106.0°87.9°
C3C6C7C8118.5°114.0°
C3C6C7H14115.4°117.5°
C3C6C8H14136.7°137.5°
C3C6C7C10109.3°87.8°
C3C6C8N972.2°77.3°
C6C3C2H4436.6°53.5°
C6C3C2H43158.3°174.9°
C6C3C4H11123.1°143.9°
C3C6C7H13122.3°143.7°
C3C6C8H48169.3°163.1°
C3C6C8H4746.4°42.3°
C5C4C7H11132.8°137.1°
C5C4C7C6105.0°79.5°
C5C4C7C10146.0°176.9°
C5C4C3H12137.9°153.4°
C4C5H45H46122.2°120.7°
C5C4C7H1312.3°40.0°
C4C7C6C10113.7°113.1°
C4C7C6H13117.9°118.4°
C4C7C6C8122.9°139.2°
C4C7C10H13133.7°137.4°
C4C7C10N986.8°120.2°
C4C7C10H4932.1°0.9°
C4C7C10H50154.3°120.5°
C7C4C3H12111.7°93.4°
C7C4C5H45142.4°131.5°
C7C4C5H4620.9°10.7°
C4C7C6H14111.0°92.2°
C7C6C8H14125.7°129.1°
C6C7C10H13127.9°129.9°
C7C6C8N925.5°16.1°
C6C7C10N911.6°27.5°
C6C7C10H49130.5°91.8°
C6C7C10H50107.3°146.8°
C7C6C3H12111.6°93.4°
C6C7C4H11122.2°143.4°
C7C6C8H4893.1°103.5°
C7C6C8H47144.0°135.7°
C8C6C7C109.2°26.2°
C6C8N9H48118.5°119.6°
C6C8N9H47118.5°119.6°
C6C8N9C1035.9°1.1°
C6C8N9C15144.0°178.9°
C8C6C3H123.9°11.2°
C8C6C7H13119.2°102.4°
C6C8H48H47124.2°120.8°
C7C10N9C830.4°18.2°
C7C10N9H49118.9°119.3°
C7C10N9H50118.9°119.3°
C7C10N9C15149.4°161.8°
C7C10H49H50123.2°121.3°
C10C7C4H1113.2°39.8°
C10C7C6H14135.3°154.7°
C8N9C10C15179.8°180.0°
C8N9C15C16178.1°175.5°
C8N9C15O170.5°4.5°
C8N9C10H49149.3°101.2°
C8N9C10H5088.5°137.5°
N9C8C6H14151.1°145.3°
N9C8H48H47124.2°120.8°
C10N9C15C161.8°4.5°
C10N9C15O17179.3°175.5°
N9C10H49H50123.2°121.4°
N9C10C7H13139.5°102.4°
C10N9C8H4882.7°120.7°
C10N9C8H47154.4°118.5°
N9C15C16O17177.5°180.0°
N9C15C16C1876.5°146.3°
N9C15C16C20104.3°34.1°
C15N9C10H4930.5°78.8°
C15N9C10H5091.7°42.6°
C15N9C8H4897.5°59.3°
C15N9C8H4725.4°61.5°
C15C16C18C20179.1°179.7°
C15C16C18C19179.3°180.0°
C15C16C20C21178.6°180.0°
C15C16C18H510.7°0.0°
C15C16C20H531.4°0.0°
O17C15C16C18101.0°33.7°
O17C15C16C2078.2°145.9°
C16C18C19H51180.0°179.9°
C16C18C19C220.9°0.1°
C18C16C20C210.5°0.3°
C16C18C19H52179.2°179.9°
C18C16C20H53179.5°179.7°
C20C16C18C190.2°0.3°
C16C20C21H53180.0°180.0°
C16C20C21C220.5°0.0°
C16C20C21N25179.8°179.9°
C20C16C18H51179.8°179.7°
C18C19C22H52180.0°180.0°
C18C19C22C210.9°0.2°
C18C19C22N23179.4°180.0°
C19C22C21C200.2°0.2°
C19C22C21N23179.8°179.8°
C19C22C21N25179.6°179.7°
C19C22N23N24179.8°180.0°
C22C19C18H51179.2°180.0°
C19C22N23H540.2°0.0°
C20C21C22N25179.8°179.9°
C20C21C22N23180.0°179.9°
C20C21N25N24179.9°179.6°
C21C22N23N240.0°0.2°
C22C21N25N240.4°0.5°
C21C22C19H52179.1°179.8°
C22C21C20H53179.5°180.0°
C21C22N23H54180.0°179.8°
N25C21C22N230.2°0.1°
C21N25N24N230.4°0.7°
N25C21C20H530.2°0.1°
C22N23N24H54180.0°180.0°
C22N23N24N250.2°0.6°
N23C22C19H520.6°0.0°
N25N24N23H54179.8°179.5°
C26C27C29C31179.3°179.8°
C26C27C29C30179.0°180.0°
C26C27C31N32179.6°180.0°
C26C27C29H551.0°0.0°
C26C27C31H560.4°0.0°
O28C26C27C29101.8°171.9°
O28C26C27C3177.5°7.9°
C27C29C30H55180.0°180.0°
C27C29C30C330.8°0.0°
C27C29C30C40179.8°180.0°
C29C27C31N320.2°0.2°
C29C27C31H56179.8°179.8°
C31C27C29C300.3°0.3°
C27C31N32H56180.0°180.0°
C27C31N32C330.1°0.1°
C31C27C29H55179.7°179.7°
C29C30C33C40179.4°180.0°
C29C30C33N321.0°0.4°
C29C30C33O34179.4°180.0°
C29C30C40C4148.7°60.0°
C29C30C40C4220.6°8.7°
C29C30C40H59167.6°154.3°
C30C33N32C310.5°0.4°
C30C33N32O34179.6°179.6°
C30C33O34C35179.8°180.0°
C33C30C40C41130.6°120.0°
C33C30C40C42160.1°171.3°
C33C30C29H55179.2°180.0°
C33C30C40H5913.1°25.7°
C40C30C33N32179.7°179.7°
C40C30C33O340.1°0.0°
C30C40C41C42110.6°107.5°
C30C40C41H59143.9°145.0°
C30C40C42H59147.2°145.0°
C40C30C29H550.2°0.0°
C30C40C41H601.0°0.1°
C30C40C41H61139.8°145.0°
C30C40C42H63143.4°145.0°
C30C40C42H622.4°0.0°
C31N32C33O34179.9°180.0°
N32C33O34C350.5°0.3°
C33N32C31H56179.9°179.9°
C33O34C35C36173.6°180.0°
C33O34C35H5755.0°60.0°
C33O34C35H5867.9°60.0°
O34C35C36H57118.5°120.0°
O34C35C36H58118.6°120.0°
O34C35C36F3750.6°60.0°
O34C35C36F38170.0°180.0°
O34C35C36F3964.6°60.0°
O34C35H57H58124.1°120.0°
C35C36F37F38120.4°120.0°
C35C36F37F39123.1°120.0°
C35C36F38F39126.9°120.0°
C36C35H57H58124.1°120.0°
F37C36F38F39108.3°120.0°
F37C36C35H5767.9°60.0°
F37C36C35H58169.2°180.0°
F38C36C35H5751.5°60.0°
F38C36C35H5871.4°60.0°
F39C36C35H57176.9°180.0°
F39C36C35H5854.0°60.0°
C41C40C42H59105.8°107.5°
C40C41C42H60109.6°107.5°
C40C41C42H61109.6°107.5°
C40C41H60H61144.4°145.8°
C41C40C42H63109.5°107.5°
C41C40C42H62109.5°107.5°
C40C42H63H62144.7°145.7°
C42C41H60H61144.4°145.6°
C41C42H63H62144.6°145.7°
H49C10C7H13101.6°138.2°
H50C10C7H1320.6°16.9°
H51C18C19H520.8°0.0°
H44C2C3H1299.2°84.9°
H43C2C3H1222.5°36.4°
H12C3C4H117.0°25.2°
H12C3C6H14133.1°148.5°
H11C4C5H459.6°6.4°
H11C4C5H46111.9°127.1°
H11C4C7H13120.5°97.1°
H14C6C7H136.9°26.2°
H14C6C8H4832.6°25.7°
H14C6C8H4790.3°95.2°
H59C40C41H60144.8°145.1°
H59C40C41H614.1°0.0°
H59C40C42H633.7°0.0°
H59C40C42H62144.8°145.0°
H60C41C42H63140.9°145.0°
H60C41C42H620.1°0.1°
H61C41C42H630.1°0.0°
H61C41C42H62140.9°145.0°

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon