Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YPF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OBDPBAdoub1.48Å1.61Å
OBBPBAsing1.61Å1.48Å
PBAOAYsing1.61Å1.60Å
OAYCAXsing1.43Å1.43Å
CAXCAWsing1.53Å1.53Å
CAWCAVsing1.47Å1.47Å
CAVCAUtrip1.17Å1.25Å
CAUCANsing1.43Å1.42Å
CAPCANdoub1.40Å1.39ÅAromatic
CAPCAOsing1.36Å1.39ÅAromatic
CANCAMsing1.39Å1.39ÅAromatic
CAOCAJdoub1.40Å1.39ÅAromatic
CAMCAIdoub1.39Å1.39ÅAromatic
CAJCAIsing1.41Å1.39ÅAromatic
CAJCAHsing1.41Å1.39ÅAromatic
CAICAFsing1.47Å1.38ÅAromatic
CAHCAGdoub1.35Å1.39ÅAromatic
CAFCADdoub1.39Å1.38ÅAromatic
CAFCAEsing1.41Å1.39ÅAromatic
CAGCAEsing1.41Å1.39ÅAromatic
CADCACsing1.39Å1.38ÅAromatic
CAECABdoub1.40Å1.39ÅAromatic
CACCAQsing1.43Å1.40Å
CACCAAdoub1.40Å1.39ÅAromatic
OAZCATsing1.43Å1.43Å
CATCASsing1.53Å1.53Å
CABCAAsing1.36Å1.40ÅAromatic
CAQCARtrip1.17Å1.08Å
CARCASsing1.47Å1.43Å
PBAO1sing1.61Å1.58Å
CATH1sing1.09Å1.10Å
CATH2sing1.09Å1.10Å
CASH3sing1.09Å1.10Å
CASH4sing1.09Å1.10Å
CAPH5sing1.08Å1.08Å
CAOH6sing1.08Å1.08Å
CAMH7sing1.08Å1.08Å
CADH8sing1.08Å1.08Å
CAHH9sing1.08Å1.08Å
CAGH10sing1.08Å1.08Å
CABH11sing1.08Å1.08Å
CAAH12sing1.08Å1.08Å
CAWH13sing1.09Å1.10Å
CAWH14sing1.09Å1.10Å
CAXH15sing1.09Å1.10Å
CAXH16sing1.09Å1.10Å
OAZH17sing0.97Å0.95Å
OBBH18sing0.97Å0.95Å
O1H19sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OBDPBAOBB113.4°109.5°
OBDPBAOAY107.6°109.5°
OBDPBAO1127.4°109.5°
OBBPBAOAY110.6°109.4°
OBBPBAO193.5°109.5°
PBAOBBH18109.5°114.0°
PBAOAYCAX117.5°123.0°
OAYPBAO1103.1°109.5°
OAYCAXCAW110.2°109.5°
OAYCAXH15109.3°109.5°
OAYCAXH16109.3°109.5°
CAXCAWCAV109.5°109.5°
CAXCAWH13109.5°109.5°
CAXCAWH14109.5°109.5°
CAWCAXH15109.3°109.5°
CAWCAXH16109.3°109.5°
CAWCAVCAU179.5°180.0°
CAVCAWH13109.5°109.5°
CAVCAWH14109.5°109.5°
CAVCAUCAN178.8°180.0°
CAUCANCAP119.6°119.9°
CAUCANCAM120.5°119.8°
CANCAPCAO120.3°120.8°
CAPCANCAM120.0°120.3°
CANCAPH5119.9°119.6°
CAPCAOCAJ119.9°120.1°
CAOCAPH5119.8°119.6°
CAPCAOH6120.1°120.0°
CANCAMCAI119.5°119.5°
CANCAMH7120.3°120.3°
CAOCAJCAI119.6°119.5°
CAOCAJCAH120.4°120.8°
CAJCAOH6120.1°119.9°
CAMCAICAJ120.9°119.9°
CAMCAICAF119.3°121.3°
CAICAMH7120.3°120.3°
CAICAJCAH120.0°119.7°
CAJCAICAF119.9°118.8°
CAJCAHCAG119.9°121.6°
CAJCAHH9120.0°119.2°
CAICAFCAD118.7°121.4°
CAICAFCAE120.5°118.7°
CAHCAGCAE120.0°121.5°
CAGCAHH9120.0°119.2°
CAHCAGH10120.0°119.3°
CADCAFCAE120.7°119.9°
CAFCADCAC119.8°119.5°
CAFCADH8120.1°120.2°
CAFCAECAG119.7°119.8°
CAFCAECAB119.5°119.4°
CAGCAECAB120.8°120.8°
CAECAGH10120.0°119.3°
CADCACCAQ117.6°119.9°
CADCACCAA120.1°120.3°
CACCADH8120.1°120.3°
CAECABCAA119.9°120.1°
CAECABH11120.0°120.0°
CAQCACCAA122.3°119.9°
CACCAQCAR177.3°180.0°
CACCAACAB119.9°120.8°
CACCAAH12120.1°119.6°
OAZCATCAS109.1°109.5°
OAZCATH1109.6°109.5°
OAZCATH2109.6°109.5°
CATOAZH17109.5°113.9°
CATCASCAR108.3°109.5°
CASCATH1109.5°109.5°
CASCATH2109.6°109.5°
CATCASH3109.8°109.5°
CATCASH4109.7°109.4°
CAACABH11120.0°119.9°
CABCAAH12120.0°119.6°
CAQCARCAS178.3°180.0°
CARCASH3109.7°109.5°
CARCASH4109.7°109.5°
PBAO1H19109.5°114.0°
H1CATH2109.5°109.4°
H3CASH4109.5°109.5°
H13CAWH14109.5°109.4°
H15CAXH16109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OBDPBAOBBOAY121.0°120.0°
OBDPBAOBBO1133.6°120.0°
OBDPBAOAYO1136.8°120.0°
OBDPBAOAYCAX173.1°54.9°
OBDPBAOBBH180.0°180.0°
OBDPBAO1H190.0°60.0°
OBBPBAOAYO198.9°120.0°
OBBPBAOAYCAX48.8°65.0°
OBBPBAO1H19123.2°60.0°
PBAOAYCAXCAW166.2°180.0°
PBAOAYCAXH1573.7°59.9°
PBAOAYCAXH1646.1°60.0°
OAYPBAOBBH18121.0°60.0°
OAYPBAO1H19124.7°180.0°
OAYCAXCAWH15120.1°120.0°
OAYCAXCAWH16120.1°120.0°
OAYCAXCAWCAV66.8°180.0°
CAXOAYPBAO150.1°175.0°
OAYCAXCAWH1353.2°60.0°
OAYCAXCAWH14173.2°59.9°
OAYCAXH15H16119.7°120.0°
CAXCAWCAVH13120.0°120.0°
CAXCAWCAVH14120.0°120.0°
CAXCAWCAVCAU53.5°29.7°
CAXCAWH13H14120.0°120.0°
CAWCAXH15H16119.6°120.0°
CAWCAVCAUCAN8.7°145.6°
CAVCAWH13H14120.0°120.0°
CAVCAWCAXH15173.0°60.0°
CAVCAWCAXH1653.3°60.0°
CAVCAUCANCAP9.5°55.6°
CAVCAUCANCAM170.5°124.6°
CAUCAVCAWH1366.5°90.3°
CAUCAVCAWH14173.5°149.7°
CAUCANCAPCAM180.0°179.8°
CAUCANCAPCAO179.6°180.0°
CAUCANCAMCAI179.9°180.0°
CAUCANCAPH50.3°0.0°
CAUCANCAMH70.1°0.0°
CANCAPCAOH5180.0°180.0°
CANCAPCAOCAJ0.6°0.0°
CAPCANCAMCAI0.1°0.2°
CANCAPCAOH6179.5°180.0°
CAPCANCAMH7179.9°179.7°
CAOCAPCANCAM0.3°0.2°
CAPCAOCAJH6180.0°180.0°
CAPCAOCAJCAI0.5°0.2°
CAPCAOCAJCAH179.8°180.0°
CANCAMCAIH7180.0°179.9°
CANCAMCAICAJ0.1°0.0°
CANCAMCAICAF180.0°180.0°
CAMCANCAPH5179.7°179.8°
CAOCAJCAICAM0.3°0.2°
CAOCAJCAICAH179.7°179.8°
CAOCAJCAICAF179.8°179.7°
CAOCAJCAHCAG179.6°180.0°
CAJCAOCAPH5179.5°180.0°
CAOCAJCAHH90.4°0.0°
CAMCAICAJCAF179.9°180.0°
CAMCAICAJCAH180.0°180.0°
CAMCAICAFCAD0.3°0.6°
CAMCAICAFCAE180.0°179.5°
CAICAJCAHCAG0.1°0.2°
CAJCAICAFCAD179.6°179.4°
CAJCAICAFCAE0.1°0.6°
CAICAJCAOH6179.5°179.7°
CAJCAICAMH7179.9°180.0°
CAICAJCAHH9180.0°179.7°
CAHCAJCAICAF0.1°0.0°
CAJCAHCAGH9180.0°180.0°
CAJCAHCAGCAE0.3°0.1°
CAHCAJCAOH60.2°0.0°
CAJCAHCAGH10179.7°180.0°
CAICAFCADCAE179.7°180.0°
CAICAFCAECAG0.2°0.9°
CAICAFCADCAC179.9°180.0°
CAICAFCAECAB179.8°180.0°
CAFCAICAMH70.0°0.0°
CAICAFCADH80.1°0.0°
CAHCAGCAECAF0.4°0.6°
CAHCAGCAEH10180.0°179.9°
CAHCAGCAECAB179.6°179.8°
CADCAFCAECAG179.9°179.1°
CAFCADCACH8180.0°180.0°
CADCAFCAECAB0.1°0.0°
CAFCADCACCAQ179.7°180.0°
CAFCADCACCAA0.0°0.0°
CAFCAECAGCAB180.0°179.1°
CAECAFCADCAC0.2°0.0°
CAFCAECABCAA0.2°0.0°
CAECAFCADH8179.8°180.0°
CAFCAECAGH10179.6°179.5°
CAFCAECABH11179.8°180.0°
CAGCAECABCAA179.9°179.1°
CAECAGCAHH9179.7°180.0°
CAGCAECABH110.2°0.9°
CADCACCAQCAA179.7°180.0°
CADCACCAACAB0.2°0.0°
CADCACCAQCAR1.8°43.0°
CADCACCAAH12179.8°180.0°
CAECABCAACAC0.4°0.0°
CAECABCAAH11180.0°180.0°
CABCAECAGH100.4°0.3°
CAECABCAAH12179.7°179.9°
CAQCACCAACAB180.0°180.0°
CACCAQCARCAS4.2°92.6°
CAQCACCADH80.3°0.0°
CAQCACCAAH120.0°0.0°
CACCAACABH12180.0°179.9°
CAACACCAQCAR178.4°137.0°
CAACACCADH8179.9°180.0°
CACCAACABH11179.6°180.0°
OAZCATCASH1120.0°120.0°
OAZCATCASH2120.0°120.0°
OAZCATCASCAR143.4°180.0°
OAZCATH1H2120.2°120.0°
OAZCATCASH396.8°60.0°
OAZCATCASH423.6°60.0°
CATCASCARCAQ20.7°44.4°
CATCASCARH3119.8°120.0°
CATCASCARH4119.8°119.9°
CASCATH1H2120.1°120.0°
CATCASH3H4120.5°120.0°
CASCATOAZH17180.0°180.0°
CAQCARCASH3140.5°75.6°
CAQCARCASH499.1°164.4°
CARCASCATH123.4°60.0°
CARCASCATH296.7°60.0°
CARCASH3H4120.5°120.0°
O1PBAOBBH18133.6°60.0°
H1CATCASH3143.2°60.0°
H1CATCASH496.4°180.0°
H1CATOAZH1760.1°60.0°
H2CATCASH323.1°180.0°
H2CATCASH4143.5°60.0°
H2CATOAZH1760.0°60.0°
H5CAPCAOH60.5°0.1°
H9CAHCAGH100.3°0.1°
H11CABCAAH120.4°0.1°
H13CAWCAXH1566.9°60.0°
H13CAWCAXH16173.3°180.0°
H14CAWCAXH1553.0°179.9°
H14CAWCAXH1666.7°60.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon