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YPB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C23C24sing1.53Å1.58Å
C23O22sing1.43Å1.40Å
C36C19sing1.51Å1.45Å
C24O25sing1.43Å1.39Å
C20C19doub1.38Å1.40ÅAromatic
C20C21sing1.39Å1.41ÅAromatic
C19C18sing1.38Å1.36ÅAromatic
O25C26sing1.36Å1.36Å
C35C26doub1.39Å1.40ÅAromatic
C35C34sing1.38Å1.40ÅAromatic
O22C21sing1.36Å1.39Å
C21C16doub1.39Å1.39ÅAromatic
C26C27sing1.39Å1.36ÅAromatic
C34C33doub1.38Å1.39ÅAromatic
C18C17doub1.38Å1.39ÅAromatic
O12C11doub1.22Å1.23Å
C27C28sing1.51Å1.49Å
C27C32doub1.38Å1.40ÅAromatic
C16C17sing1.39Å1.39ÅAromatic
C16C04sing1.51Å1.55Å
C33C32sing1.38Å1.38ÅAromatic
C28O29sing1.42Å1.42Å
O29C30sing1.34Å1.34Å
C11N10sing1.35Å1.41Å
C11C05sing1.40Å1.43Å
C04C05sing1.51Å1.48Å
C04C03sing1.51Å1.50Å
N10C09sing1.34Å1.35Å
C05C06doub1.37Å1.35Å
C30O31doub1.23Å1.24Å
C30C03sing1.41Å1.44Å
C03C02doub1.34Å1.36Å
C09O13doub1.22Å1.22Å
C09N08sing1.35Å1.39Å
C06N08sing1.37Å1.38Å
C06N07sing1.37Å1.38Å
C02N07sing1.38Å1.37Å
C02C01sing1.51Å1.52Å
N08C14sing1.47Å1.48Å
C14C15sing1.53Å1.49Å
C15H153sing1.09Å1.10Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C17H171sing1.08Å1.08Å
C20H201sing1.08Å1.08Å
C24H242sing1.09Å1.10Å
C24H241sing1.09Å1.10Å
C28H281sing1.09Å1.10Å
C28H282sing1.09Å1.10Å
C01H013sing1.09Å1.10Å
C01H011sing1.09Å1.10Å
C01H012sing1.09Å1.10Å
C04H041sing1.08Å1.10Å
C14H142sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C18H181sing1.08Å1.08Å
C23H232sing1.09Å1.10Å
C23H231sing1.09Å1.10Å
C32H321sing1.08Å1.08Å
C33H331sing1.08Å1.08Å
C34H341sing1.08Å1.08Å
C35H351sing1.08Å1.08Å
C36H363sing1.09Å1.10Å
C36H361sing1.09Å1.10Å
C36H362sing1.09Å1.10Å
N07H071sing0.97Å1.00Å
N10H101sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C24C23O22106.8°110.9°
C23C24O25105.6°110.2°
C23C24H242110.4°109.4°
C23C24H241110.4°109.3°
C24C23H232110.1°109.5°
C24C23H231110.1°108.0°
C23O22C21115.6°117.9°
O22C23H232110.2°109.3°
O22C23H231110.1°110.0°
C36C19C20121.8°120.2°
C36C19C18121.2°120.3°
C19C36H363109.5°109.5°
C19C36H361109.4°109.5°
C19C36H362109.5°109.5°
C24O25C26120.3°117.5°
O25C24H242110.4°109.7°
O25C24H241110.5°109.4°
C19C20C21121.1°120.8°
C20C19C18116.9°119.5°
C19C20H201119.4°118.7°
C20C21O22123.4°118.1°
C20C21C16121.7°119.6°
C21C20H201119.4°120.5°
C19C18C17121.4°119.9°
C19C18H181119.3°120.0°
O25C26C35118.4°119.3°
O25C26C27119.1°120.8°
C26C35C34119.5°120.1°
C35C26C27122.4°119.9°
C26C35H351120.2°120.0°
C35C34C33119.0°120.0°
C35C34H341120.5°120.0°
C34C35H351120.2°119.9°
O22C21C16115.0°122.3°
C21C16C17114.9°118.9°
C21C16C04124.1°123.6°
C26C27C28121.6°120.7°
C26C27C32117.3°119.8°
C34C33C32119.6°120.1°
C34C33H331120.2°119.9°
C33C34H341120.5°120.0°
C18C17C16123.9°121.1°
C18C17H171118.1°118.8°
C17C18H181119.3°120.1°
O12C11N10116.3°120.1°
O12C11C05126.4°120.5°
C28C27C32121.1°119.5°
C27C28O29109.5°110.6°
C27C28H281109.5°109.8°
C27C28H282109.5°109.0°
C27C32C33122.1°120.2°
C27C32H321119.0°119.8°
C17C16C04120.9°117.4°
C16C17H171118.1°120.2°
C16C04C05109.4°107.2°
C16C04C03113.4°111.1°
C16C04H041107.2°109.8°
C33C32H321119.0°119.9°
C32C33H331120.2°120.0°
C28O29C30119.8°118.7°
O29C28H281109.5°109.4°
O29C28H282109.5°109.0°
O29C30O31119.1°117.4°
O29C30C03110.8°125.0°
N10C11C05117.2°119.4°
C11N10C09123.7°120.3°
C11N10H101118.1°119.8°
C11C05C04118.6°120.7°
C11C05C06117.9°119.6°
C05C04C03110.6°110.3°
C04C05C06123.4°119.7°
C05C04H041108.1°109.2°
C04C03C30119.5°116.7°
C04C03C02118.6°120.0°
C03C04H041107.9°109.2°
N10C09O13121.4°119.5°
N10C09N08117.7°121.4°
C09N10H101118.2°119.9°
C05C06N08123.3°119.0°
C05C06N07118.4°119.8°
O31C30C03130.0°117.5°
C30C03C02118.8°123.1°
C03C02N07119.5°120.4°
C03C02C01126.6°122.9°
O13C09N08120.9°119.1°
C09N08C06120.0°120.3°
C09N08C14115.3°118.7°
N08C06N07118.2°121.1°
C06N08C14124.7°121.1°
C06N07C02122.3°121.4°
C06N07H071118.8°121.3°
N07C02C01112.3°116.6°
C02N07H071118.9°117.2°
C02C01H013109.5°109.5°
C02C01H011109.4°109.5°
C02C01H012109.5°109.5°
N08C14C15116.0°109.5°
N08C14H142107.8°109.6°
N08C14H141107.8°109.4°
C14C15H153109.5°109.5°
C14C15H151109.5°109.4°
C14C15H152109.4°109.5°
C15C14H142107.8°109.5°
C15C14H141107.8°109.5°
H153C15H151109.4°109.4°
H153C15H152109.5°109.5°
H151C15H152109.5°109.5°
H242C24H241109.5°108.9°
H281C28H282109.4°109.0°
H013C01H011109.5°109.5°
H013C01H012109.5°109.4°
H011C01H012109.5°109.4°
H142C14H141109.5°109.4°
H232C23H231109.5°109.1°
H363C36H361109.5°109.5°
H363C36H362109.4°109.5°
H361C36H362109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C24C23O22H232119.6°120.8°
C24C23O22H231119.6°119.4°
C23C24O25H242119.4°120.4°
C23C24O25H241119.4°120.2°
C23C24O25C26157.1°173.0°
C24C23O22C21152.4°136.8°
C23C24H242H241121.8°119.4°
C24C23H232H231121.2°118.0°
O22C23C24O2568.5°43.9°
C23O22C21C2022.4°14.8°
C23O22C21C16158.5°163.8°
O22C23C24H242172.1°76.7°
O22C23C24H24150.9°164.1°
O22C23H232H231121.2°120.3°
C36C19C20C18179.7°180.0°
C36C19C20C21179.7°179.7°
C36C19C18C17180.0°179.8°
C36C19C20H2010.3°1.5°
C36C19C18H1810.0°0.3°
C19C36H363H361120.0°120.0°
C19C36H363H362120.0°120.0°
C19C36H361H362120.0°120.0°
C24O25C26C3527.3°98.0°
C24O25C26C27155.0°81.9°
O25C24H242H241121.8°119.7°
O25C24C23H232171.9°76.8°
O25C24C23H23151.0°164.5°
C19C20C21H201180.0°178.7°
C19C20C21O22179.2°176.2°
C19C20C21C161.7°2.5°
C20C19C18C170.2°0.3°
C20C19C18H181179.7°179.6°
C20C19C36H36389.8°90.0°
C20C19C36H361150.1°150.0°
C20C19C36H36230.2°30.1°
C21C20C19C180.0°0.3°
C20C21O22C16179.1°178.6°
C20C21C16C172.9°4.1°
C20C21C16C04178.9°173.7°
C19C18C17H181180.0°179.9°
C19C18C17C161.1°1.5°
C19C18C17H171178.8°179.5°
C18C19C20H201180.0°178.5°
C18C19C36H36389.9°90.0°
C18C19C36H36130.1°30.0°
C18C19C36H362150.1°150.0°
O25C26C35C27177.6°179.9°
O25C26C35C34178.2°179.9°
O25C26C27C282.9°0.4°
O25C26C27C32178.3°179.8°
C26O25C24H24283.6°52.6°
C26O25C24H24137.7°66.8°
O25C26C35H3511.8°0.0°
C26C35C34H351180.0°179.9°
C26C35C34C330.2°0.0°
C35C26C27C28179.6°179.6°
C35C26C27C320.8°0.3°
C26C35C34H341179.9°179.9°
C34C35C26C270.6°0.0°
C35C34C33H341180.0°179.9°
C35C34C33C320.7°0.2°
C35C34C33H331179.3°180.0°
O22C21C16C17178.0°174.5°
O22C21C16C040.3°7.7°
O22C21C20H2010.8°5.1°
C21O22C23H23288.0°102.3°
C21O22C23H23132.8°17.4°
C21C16C17C182.6°3.7°
C21C16C17C04178.3°178.0°
C21C16C04C05114.7°166.9°
C21C16C04C03121.3°72.5°
C21C16C17H171177.4°177.3°
C16C21C20H201178.3°176.2°
C21C16C04H0412.3°48.4°
C26C27C28C32178.7°179.8°
C26C27C32C330.2°0.5°
C26C27C28O2965.7°79.8°
C26C27C28H28154.3°41.1°
C26C27C28H282174.3°160.4°
C26C27C32H321179.8°179.6°
C27C26C35H351179.4°179.9°
C34C33C32C270.5°0.5°
C34C33C32H331180.0°179.8°
C34C33C32H321179.4°179.7°
C33C34C35H351179.9°180.0°
C18C17C16H171180.0°179.0°
C18C17C16C04179.0°174.3°
O12C11N10C05178.7°179.9°
O12C11C05C043.2°2.8°
O12C11N10C09179.7°179.6°
O12C11C05C06177.6°177.5°
O12C11N10H1010.4°0.7°
C28C27C32C33179.0°179.3°
C27C28O29H281120.0°121.1°
C27C28O29H282120.0°119.8°
C27C28O29C30164.2°104.3°
C27C28H281H282120.0°119.3°
C28C27C32H3211.0°0.6°
C27C32C33H321180.0°179.9°
C32C27C28O29113.0°100.4°
C32C27C28H281127.0°138.8°
C32C27C28H2827.0°19.4°
C27C32C33H331179.4°179.8°
C17C16C04C0567.1°11.0°
C17C16C04C0356.8°109.6°
C17C16C04H041175.9°129.5°
C16C17C18H181178.9°178.6°
C16C04C05C1170.4°84.3°
C16C04C05C03125.6°121.1°
C16C04C05H041116.5°119.0°
C16C04C03H041118.6°121.3°
C16C04C05C06108.7°95.3°
C16C04C03C3067.2°93.2°
C16C04C03C0293.0°90.2°
C04C16C17H1711.0°4.7°
C32C33C34H341179.3°179.9°
C28O29C30O319.7°78.0°
C28O29C30C03172.1°103.4°
O29C28H281H282120.0°119.1°
O29C30C03C0440.7°180.0°
O29C30O31C03177.7°178.8°
O29C30C03C02159.1°3.5°
C30O29C28H28175.8°16.8°
C30O29C28H28244.2°135.9°
N10C11C05C04178.2°177.1°
C11N10C09H101180.0°179.7°
N10C11C05C061.0°2.6°
C11N10C09O13177.9°178.4°
C11N10C09N083.5°1.8°
C11C05C04C06179.1°179.6°
C11C05C04C03164.0°154.6°
C05C11N10C090.9°0.5°
C11C05C06N080.2°2.4°
C11C05C06N07179.8°175.6°
C11C05C04H04146.0°34.6°
C05C11N10H101179.1°179.2°
C05C04C03H041118.0°119.9°
C05C04C03C30169.4°148.0°
C05C04C03C0230.4°28.6°
C04C05C06N08178.9°177.2°
C04C05C06N070.6°4.8°
C03C04C05C0616.9°25.8°
C04C03C30O31137.2°1.3°
C04C03C30C02160.2°176.5°
C04C03C02N0728.4°10.0°
C04C03C02C01167.5°167.1°
N10C09O13N08178.6°179.8°
N10C09N08C064.2°1.9°
N10C09N08C14176.7°178.1°
C05C06N08C092.5°0.3°
C05C06N08N07179.6°178.0°
C05C06N07C024.2°17.3°
C05C06N08C14178.5°179.8°
C06C05C04H041134.8°145.7°
C05C06N07H071175.8°160.9°
O31C30C03C0223.0°175.2°
C30C03C02N07171.3°166.4°
C30C03C02C017.1°16.5°
C30C03C04H04151.4°28.1°
C03C02N07C0610.1°14.7°
C03C02N07C01166.3°177.3°
C03C02C01H013180.0°177.3°
C03C02C01H01160.0°57.2°
C03C02C01H01260.0°62.8°
C02C03C04H041148.4°148.5°
C03C02N07H071169.9°163.6°
O13C09N08C06177.2°178.3°
O13C09N08C142.0°1.8°
O13C09N10H1012.1°1.3°
C09N08C06C14179.0°179.9°
C09N08C06N07177.1°177.8°
C09N08C14C1591.7°89.9°
C09N08C14H142147.4°150.0°
C09N08C14H14129.3°30.1°
N08C09N10H101176.5°178.6°
N08C06N07C02176.2°160.6°
C06N08C14C1587.4°90.0°
C06N08C14H14233.6°30.0°
C06N08C14H141151.7°150.0°
N08C06N07H0713.8°21.1°
C06N07C02H071180.0°178.3°
C06N07C02C01176.4°168.0°
N07C06N08C141.9°2.2°
N07C02C01H01314.9°0.1°
N07C02C01H011134.9°120.0°
N07C02C01H012105.2°120.0°
C02C01H013H011120.0°120.1°
C02C01H013H012120.0°120.0°
C02C01H011H012120.0°120.0°
C01C02N07H0713.6°13.7°
N08C14C15H142121.0°120.1°
N08C14C15H141121.0°119.9°
N08C14C15H153180.0°60.0°
N08C14C15H15160.0°179.9°
N08C14C15H15260.0°60.1°
N08C14H142H141117.0°120.0°
C14C15H153H151120.0°120.0°
C14C15H153H152120.0°120.0°
C14C15H151H152120.0°120.0°
C15C14H142H141117.0°120.0°
H153C15H151H152120.0°120.0°
H153C15C14H14259.1°179.9°
H153C15C14H14159.0°59.9°
H151C15C14H142179.1°59.9°
H151C15C14H14161.0°60.0°
H152C15C14H14261.0°60.0°
H152C15C14H141179.1°180.0°
H171C17C18H1811.1°0.4°
H242C24C23H23252.5°162.6°
H242C24C23H23168.3°43.9°
H241C24C23H23268.7°43.4°
H241C24C23H231170.5°75.2°
H013C01H011H012120.0°119.9°
H321C32C33H3310.6°0.1°
H331C33C34H3410.7°0.1°
H341C34C35H3510.1°0.0°
H363C36H361H362120.0°120.0°

246704

PDB entries from 2025-12-24

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