YP1

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O2	C16	sing	1.43Å	0.00Å
C17	C16	sing	1.53Å	0.00Å
C17	O1	sing	1.43Å	0.00Å
C16	C15	sing	1.53Å	0.00Å
C23	C22	doub	1.38Å	0.00Å	Aromatic
C23	C18	sing	1.39Å	0.00Å	Aromatic
C22	C21	sing	1.39Å	0.00Å	Aromatic
C15	N2	sing	1.47Å	0.00Å
O1	C18	sing	1.36Å	0.00Å
N2	C2	sing	1.47Å	0.00Å
C18	C19	doub	1.40Å	0.00Å	Aromatic
C21	C20	doub	1.38Å	0.00Å	Aromatic
C1	C2	sing	1.53Å	0.00Å
C2	C4	sing	1.53Å	0.00Å
C2	C3	sing	1.53Å	0.00Å
C19	C20	sing	1.40Å	0.00Å	Aromatic
C19	C24	sing	1.43Å	0.00Å
C20	CL1	sing	1.74Å	0.00Å
C4	C5	sing	1.51Å	0.00Å
C24	N1	trip	1.14Å	0.00Å
C5	C14	doub	1.39Å	0.00Å	Aromatic
C5	C6	sing	1.36Å	0.00Å	Aromatic
C14	C13	sing	1.36Å	0.00Å	Aromatic
C6	C7	doub	1.41Å	0.00Å	Aromatic
C13	C12	doub	1.40Å	0.00Å	Aromatic
C7	C12	sing	1.42Å	0.00Å	Aromatic
C7	C8	sing	1.40Å	0.00Å	Aromatic
C12	C11	sing	1.41Å	0.00Å	Aromatic
C8	C9	doub	1.36Å	0.00Å	Aromatic
C11	C10	doub	1.36Å	0.00Å	Aromatic
C9	C10	sing	1.39Å	0.00Å	Aromatic
C1	H1	sing	1.09Å	0.00Å
C1	H2	sing	1.09Å	0.00Å
C1	H3	sing	1.09Å	0.00Å
O2	H4	sing	0.97Å	0.00Å
C14	H5	sing	1.08Å	0.00Å
C3	H6	sing	1.09Å	0.00Å
C3	H7	sing	1.09Å	0.00Å
C3	H8	sing	1.09Å	0.00Å
C4	H9	sing	1.09Å	0.00Å
C4	H10	sing	1.09Å	0.00Å
C6	H11	sing	1.08Å	0.00Å
C8	H12	sing	1.08Å	0.00Å
C10	H13	sing	1.08Å	0.00Å
C13	H14	sing	1.08Å	0.00Å
C11	H15	sing	1.08Å	0.00Å
C15	H16	sing	1.09Å	0.00Å
C15	H17	sing	1.09Å	0.00Å
N2	H18	sing	1.01Å	0.00Å
C9	H20	sing	1.08Å	0.00Å
C16	H21	sing	1.09Å	0.00Å
C17	H22	sing	1.09Å	0.00Å
C17	H23	sing	1.09Å	0.00Å
C21	H24	sing	1.08Å	0.00Å
C22	H25	sing	1.08Å	0.00Å
C23	H26	sing	1.08Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2	C16	C17	90.0°	109.5°
O2	C16	C15	90.0°	109.5°
C16	O2	H4	90.0°	114.0°
O2	C16	H21	90.0°	109.4°
C16	C17	O1	90.0°	109.5°
C17	C16	C15	90.0°	109.5°
C17	C16	H21	90.0°	109.5°
C16	C17	H22	90.0°	109.5°
C16	C17	H23	90.0°	109.5°
C17	O1	C18	90.0°	117.0°
O1	C17	H22	90.0°	109.5°
O1	C17	H23	90.0°	109.4°
C16	C15	N2	90.0°	109.5°
C16	C15	H16	90.0°	109.4°
C16	C15	H17	90.0°	109.5°
C15	C16	H21	90.0°	109.5°
C22	C23	C18	90.0°	120.1°
C23	C22	C21	90.0°	120.4°
C23	C22	H25	90.0°	119.8°
C22	C23	H26	90.0°	119.9°
C23	C18	O1	90.0°	120.1°
C23	C18	C19	90.0°	119.7°
C18	C23	H26	90.0°	120.0°
C22	C21	C20	90.0°	120.3°
C22	C21	H24	90.0°	119.9°
C21	C22	H25	90.0°	119.8°
C15	N2	C2	90.0°	111.0°
N2	C15	H16	90.0°	109.5°
N2	C15	H17	90.0°	109.5°
C15	N2	H18	90.0°	111.0°
O1	C18	C19	90.0°	120.2°
N2	C2	C1	90.0°	109.5°
N2	C2	C4	90.0°	109.4°
N2	C2	C3	90.0°	109.5°
C2	N2	H18	90.0°	111.0°
C18	C19	C20	90.0°	119.6°
C18	C19	C24	90.0°	120.2°
C21	C20	C19	90.0°	119.9°
C21	C20	CL1	90.0°	120.1°
C20	C21	H24	90.0°	119.8°
C1	C2	C4	90.0°	109.5°
C1	C2	C3	90.0°	109.5°
C2	C1	H1	90.0°	109.5°
C2	C1	H2	90.0°	109.4°
C2	C1	H3	90.0°	109.5°
C4	C2	C3	90.0°	109.4°
C2	C4	C5	90.0°	109.4°
C2	C4	H9	90.0°	109.4°
C2	C4	H10	90.0°	109.5°
C2	C3	H6	90.0°	109.4°
C2	C3	H7	90.0°	109.5°
C2	C3	H8	90.0°	109.4°
C20	C19	C24	90.0°	120.3°
C19	C20	CL1	90.0°	120.0°
C19	C24	N1	90.0°	180.0°
C4	C5	C14	90.0°	119.5°
C4	C5	C6	90.0°	119.5°
C5	C4	H9	90.0°	109.5°
C5	C4	H10	90.0°	109.5°
C14	C5	C6	90.0°	121.0°
C5	C14	C13	90.0°	120.9°
C5	C14	H5	90.0°	119.5°
C5	C6	C7	90.0°	119.7°
C5	C6	H11	90.0°	120.1°
C14	C13	C12	90.0°	119.7°
C13	C14	H5	90.0°	119.6°
C14	C13	H14	90.0°	120.1°
C6	C7	C12	90.0°	119.3°
C6	C7	C8	90.0°	121.3°
C7	C6	H11	90.0°	120.2°
C13	C12	C7	90.0°	119.4°
C13	C12	C11	90.0°	121.3°
C12	C13	H14	90.0°	120.2°
C12	C7	C8	90.0°	119.4°
C7	C12	C11	90.0°	119.3°
C7	C8	C9	90.0°	119.7°
C7	C8	H12	90.0°	120.1°
C12	C11	C10	90.0°	119.7°
C12	C11	H15	90.0°	120.1°
C8	C9	C10	90.0°	121.0°
C9	C8	H12	90.0°	120.2°
C8	C9	H20	90.0°	119.5°
C11	C10	C9	90.0°	121.0°
C11	C10	H13	90.0°	119.5°
C10	C11	H15	90.0°	120.2°
C9	C10	H13	90.0°	119.5°
C10	C9	H20	90.0°	119.5°
H1	C1	H2	90.0°	109.5°
H1	C1	H3	90.0°	109.5°
H2	C1	H3	90.0°	109.4°
H6	C3	H7	90.0°	109.5°
H6	C3	H8	90.0°	109.4°
H7	C3	H8	90.0°	109.5°
H9	C4	H10	90.0°	109.5°
H16	C15	H17	90.0°	109.5°
H22	C17	H23	90.0°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2	C16	C17	C15	90.0°	120.0°
O2	C16	C17	H21	90.0°	120.0°
O2	C16	C17	O1	90.0°	65.0°
O2	C16	C15	H21	90.0°	120.0°
O2	C16	C15	N2	90.0°	65.0°
O2	C16	C15	H16	90.0°	55.0°
O2	C16	C15	H17	90.0°	175.0°
O2	C16	C17	H22	90.0°	175.0°
O2	C16	C17	H23	90.0°	55.0°
C16	C17	O1	H22	90.0°	120.0°
C16	C17	O1	H23	90.0°	120.0°
C17	C16	C15	H21	90.0°	120.0°
C17	C16	C15	N2	90.0°	175.0°
C16	C17	O1	C18	90.0°	180.0°
C17	C16	O2	H4	90.0°	60.0°
C17	C16	C15	H16	90.0°	65.0°
C17	C16	C15	H17	90.0°	55.0°
C16	C17	H22	H23	90.0°	120.0°
O1	C17	C16	C15	90.0°	175.0°
C17	O1	C18	C23	90.0°	0.3°
C17	O1	C18	C19	90.0°	180.0°
O1	C17	C16	H21	90.0°	55.0°
O1	C17	H22	H23	90.0°	120.0°
C16	C15	N2	H16	90.0°	120.0°
C16	C15	N2	H17	90.0°	120.0°
C16	C15	N2	C2	90.0°	180.0°
C15	C16	O2	H4	90.0°	60.0°
C16	C15	H16	H17	90.0°	120.0°
C16	C15	N2	H18	90.0°	56.1°
C15	C16	C17	H22	90.0°	55.0°
C15	C16	C17	H23	90.0°	65.0°
C22	C23	C18	H26	90.0°	179.4°
C23	C22	C21	H25	90.0°	179.7°
C22	C23	C18	O1	90.0°	179.7°
C22	C23	C18	C19	90.0°	0.6°
C23	C22	C21	C20	90.0°	0.3°
C23	C22	C21	H24	90.0°	179.8°
C18	C23	C22	C21	90.0°	0.6°
C23	C18	O1	C19	90.0°	179.7°
C23	C18	C19	C20	90.0°	0.4°
C23	C18	C19	C24	90.0°	179.8°
C18	C23	C22	H25	90.0°	179.7°
C22	C21	C20	H24	90.0°	179.9°
C22	C21	C20	C19	90.0°	0.1°
C22	C21	C20	CL1	90.0°	180.0°
C21	C22	C23	H26	90.0°	180.0°
C15	N2	C2	H18	90.0°	123.9°
C15	N2	C2	C1	90.0°	60.0°
C15	N2	C2	C4	90.0°	180.0°
C15	N2	C2	C3	90.0°	60.1°
N2	C15	H16	H17	90.0°	120.0°
N2	C15	C16	H21	90.0°	55.0°
O1	C18	C19	C20	90.0°	180.0°
O1	C18	C19	C24	90.0°	0.1°
C18	O1	C17	H22	90.0°	60.0°
C18	O1	C17	H23	90.0°	60.1°
O1	C18	C23	H26	90.0°	0.3°
N2	C2	C1	C4	90.0°	120.0°
N2	C2	C1	C3	90.0°	120.0°
N2	C2	C4	C3	90.0°	120.0°
N2	C2	C4	C5	90.0°	180.0°
N2	C2	C1	H1	90.0°	180.0°
N2	C2	C1	H2	90.0°	60.0°
N2	C2	C1	H3	90.0°	59.9°
N2	C2	C3	H6	90.0°	180.0°
N2	C2	C3	H7	90.0°	60.0°
N2	C2	C3	H8	90.0°	60.1°
N2	C2	C4	H9	90.0°	60.0°
N2	C2	C4	H10	90.0°	60.0°
C2	N2	C15	H16	90.0°	60.0°
C2	N2	C15	H17	90.0°	60.0°
C18	C19	C20	C21	90.0°	0.1°
C18	C19	C20	C24	90.0°	179.9°
C18	C19	C20	CL1	90.0°	180.0°
C18	C19	C24	N1	90.0°	160.1°
C19	C18	C23	H26	90.0°	180.0°
C21	C20	C19	CL1	90.0°	179.9°
C21	C20	C19	C24	90.0°	180.0°
C20	C21	C22	H25	90.0°	180.0°
C1	C2	C4	C3	90.0°	120.0°
C1	C2	C4	C5	90.0°	60.0°
C2	C1	H1	H2	90.0°	120.0°
C2	C1	H1	H3	90.0°	120.0°
C2	C1	H2	H3	90.0°	120.0°
C1	C2	C3	H6	90.0°	59.9°
C1	C2	C3	H7	90.0°	180.0°
C1	C2	C3	H8	90.0°	60.0°
C1	C2	C4	H9	90.0°	60.0°
C1	C2	C4	H10	90.0°	180.0°
C1	C2	N2	H18	90.0°	63.9°
C2	C4	C5	H9	90.0°	119.9°
C2	C4	C5	H10	90.0°	120.0°
C2	C4	C5	C14	90.0°	90.0°
C2	C4	C5	C6	90.0°	90.0°
C4	C2	C1	H1	90.0°	60.0°
C4	C2	C1	H2	90.0°	180.0°
C4	C2	C1	H3	90.0°	60.0°
C4	C2	C3	H6	90.0°	60.0°
C4	C2	C3	H7	90.0°	60.0°
C4	C2	C3	H8	90.0°	180.0°
C2	C4	H9	H10	90.0°	120.0°
C4	C2	N2	H18	90.0°	56.1°
C3	C2	C4	C5	90.0°	60.0°
C3	C2	C1	H1	90.0°	60.0°
C3	C2	C1	H2	90.0°	60.0°
C3	C2	C1	H3	90.0°	180.0°
C2	C3	H6	H7	90.0°	120.0°
C2	C3	H6	H8	90.0°	119.9°
C2	C3	H7	H8	90.0°	120.0°
C3	C2	C4	H9	90.0°	180.0°
C3	C2	C4	H10	90.0°	60.0°
C3	C2	N2	H18	90.0°	176.0°
C20	C19	C24	N1	90.0°	20.0°
C19	C20	C21	H24	90.0°	180.0°
C24	C19	C20	CL1	90.0°	0.1°
CL1	C20	C21	H24	90.0°	0.1°
C4	C5	C14	C6	90.0°	180.0°
C4	C5	C14	C13	90.0°	180.0°
C4	C5	C6	C7	90.0°	180.0°
C4	C5	C14	H5	90.0°	0.3°
C5	C4	H9	H10	90.0°	120.0°
C4	C5	C6	H11	90.0°	0.0°
C5	C14	C13	H5	90.0°	179.7°
C14	C5	C6	C7	90.0°	0.0°
C5	C14	C13	C12	90.0°	0.1°
C14	C5	C4	H9	90.0°	29.9°
C14	C5	C4	H10	90.0°	150.0°
C14	C5	C6	H11	90.0°	180.0°
C5	C14	C13	H14	90.0°	179.7°
C6	C5	C14	C13	90.0°	0.0°
C5	C6	C7	H11	90.0°	180.0°
C5	C6	C7	C12	90.0°	0.0°
C5	C6	C7	C8	90.0°	180.0°
C6	C5	C14	H5	90.0°	179.7°
C6	C5	C4	H9	90.0°	150.1°
C6	C5	C4	H10	90.0°	30.0°
C14	C13	C12	H14	90.0°	179.7°
C14	C13	C12	C7	90.0°	0.1°
C14	C13	C12	C11	90.0°	179.9°
C6	C7	C12	C13	90.0°	0.0°
C6	C7	C12	C8	90.0°	180.0°
C6	C7	C12	C11	90.0°	180.0°
C6	C7	C8	C9	90.0°	180.0°
C6	C7	C8	H12	90.0°	0.0°
C13	C12	C7	C11	90.0°	180.0°
C13	C12	C7	C8	90.0°	180.0°
C13	C12	C11	C10	90.0°	180.0°
C12	C13	C14	H5	90.0°	179.7°
C13	C12	C11	H15	90.0°	0.0°
C12	C7	C8	C9	90.0°	0.1°
C7	C12	C11	C10	90.0°	0.1°
C12	C7	C6	H11	90.0°	180.0°
C12	C7	C8	H12	90.0°	180.0°
C7	C12	C13	H14	90.0°	179.7°
C7	C12	C11	H15	90.0°	180.0°
C8	C7	C12	C11	90.0°	0.1°
C7	C8	C9	H12	90.0°	179.9°
C7	C8	C9	C10	90.0°	0.1°
C8	C7	C6	H11	90.0°	0.0°
C7	C8	C9	H20	90.0°	179.9°
C12	C11	C10	H15	90.0°	180.0°
C12	C11	C10	C9	90.0°	0.1°
C12	C11	C10	H13	90.0°	180.0°
C11	C12	C13	H14	90.0°	0.4°
C8	C9	C10	C11	90.0°	0.1°
C8	C9	C10	H20	90.0°	180.0°
C8	C9	C10	H13	90.0°	180.0°
C11	C10	C9	H13	90.0°	179.9°
C11	C10	C9	H20	90.0°	179.9°
C10	C9	C8	H12	90.0°	180.0°
C9	C10	C11	H15	90.0°	180.0°
H1	C1	H2	H3	90.0°	120.0°
H4	O2	C16	H21	90.0°	180.0°
H5	C14	C13	H14	90.0°	0.0°
H6	C3	H7	H8	90.0°	120.0°
H12	C8	C9	H20	90.0°	0.0°
H13	C10	C11	H15	90.0°	0.0°
H13	C10	C9	H20	90.0°	0.0°
H16	C15	N2	H18	90.0°	63.9°
H16	C15	C16	H21	90.0°	175.0°
H17	C15	N2	H18	90.0°	176.1°
H17	C15	C16	H21	90.0°	65.0°
H21	C16	C17	H22	90.0°	65.0°
H21	C16	C17	H23	90.0°	175.0°
H24	C21	C22	H25	90.0°	0.1°
H25	C22	C23	H26	90.0°	0.3°

Release date:	2021-06-16
Definition date:	2021-03-18
Last modified:	2021-06-11
Release status:	REL
Processing site:	RCSB