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SummaryGeometryRelated PDB entries

YN2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01C02sing1.52Å1.51Å
C01N03sing1.45Å1.47Å
N03C04sing1.46Å1.45Å
C04C05sing1.50Å1.48Å
C02C06sing1.49Å1.54Å
C05C07sing1.49Å1.54Å
C06C07sing1.51Å1.50Å
C07C08sing1.54Å1.55Å
C08N09sing1.48Å1.47Å
C06C10sing1.56Å1.53Å
N09C10sing1.48Å1.45Å
N09C13sing1.35Å1.45Å
C13C14sing1.48Å1.53Å
C13O15doub1.22Å1.23Å
C14C16doub1.40Å1.41ÅAromatic
C16C17sing1.36Å1.39ÅAromatic
C14C18sing1.39Å1.39ÅAromatic
C18C19doub1.40Å1.41ÅAromatic
C17C20doub1.39Å1.42ÅAromatic
C19C20sing1.41Å1.38ÅAromatic
C20N21sing1.37Å1.40ÅAromatic
N21N22sing1.40Å1.37ÅAromatic
C19N23sing1.36Å1.39ÅAromatic
N22N23doub1.29Å1.39ÅAromatic
N03C24sing1.35Å1.49Å
C24O25doub1.22Å1.24Å
C24C26sing1.46Å1.52Å
C26C27doub1.35Å1.38Å
C27C28sing1.47Å1.49Å
C28C29doub1.40Å1.40ÅAromatic
C29C30sing1.37Å1.42ÅAromatic
C30C31doub1.40Å1.36ÅAromatic
C31C32sing1.40Å1.43ÅAromatic
C28C33sing1.40Å1.39ÅAromatic
C32C33doub1.37Å1.39ÅAromatic
C31C34sing1.43Å1.49Å
C34N35trip1.14Å1.13Å
C01H37sing1.09Å1.10Å
C01H36sing1.09Å1.10Å
C02H38sing1.09Å1.10Å
C02H39sing1.09Å1.10Å
C04H41sing1.09Å1.10Å
C04H40sing1.09Å1.10Å
C05H43sing1.09Å1.10Å
C05H42sing1.09Å1.10Å
C06H12sing1.09Å1.10Å
C07H11sing1.09Å1.10Å
C10H46sing1.09Å1.10Å
C10H47sing1.09Å1.10Å
C16H48sing1.08Å1.08Å
C17H49sing1.08Å1.08Å
C18H50sing1.08Å1.08Å
C26H52sing1.08Å1.08Å
C27H53sing1.08Å1.08Å
C08H45sing1.09Å1.10Å
C08H44sing1.09Å1.10Å
N21H51sing0.97Å1.00Å
C29H54sing1.08Å1.08Å
C30H55sing1.08Å1.08Å
C32H56sing1.08Å1.08Å
C33H57sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C02C01N03117.3°109.9°
C01C02C06115.6°114.8°
C02C01H37107.5°109.4°
C02C01H36107.5°109.4°
C01C02H38107.9°108.4°
C01C02H39107.9°108.4°
C01N03C04129.5°121.2°
C01N03C24111.9°119.4°
N03C01H37107.5°109.4°
N03C01H36107.5°109.4°
N03C04C05114.0°113.4°
C04N03C24118.6°119.4°
N03C04H41108.3°108.7°
N03C04H40108.3°108.7°
C04C05C07119.6°116.4°
C05C04H41108.3°108.7°
C05C04H40108.3°108.7°
C04C05H43106.9°108.1°
C04C05H42106.9°108.1°
C02C06C07120.0°116.5°
C02C06C10116.0°109.0°
C06C02H38107.9°108.4°
C06C02H39107.9°108.4°
C02C06H12104.6°109.6°
C05C07C06124.4°119.0°
C05C07C08113.6°112.8°
C07C05H43106.9°108.0°
C07C05H42106.9°108.0°
C05C07H11104.7°106.4°
C06C07C08102.5°106.3°
C07C06C10105.1°102.6°
C07C06H12105.0°109.6°
C06C07H11105.2°106.2°
C07C08N09106.5°106.3°
C08C07H11104.6°105.1°
C07C08H45110.2°110.1°
C07C08H44110.2°110.1°
C08N09C10109.1°105.9°
C08N09C13122.7°127.1°
N09C08H45110.2°110.1°
N09C08H44110.2°110.0°
C06C10N09102.7°102.8°
C10C06H12104.6°109.2°
C06C10H46111.1°110.7°
C06C10H47111.1°110.8°
C10N09C13128.2°127.1°
N09C10H46111.1°110.7°
N09C10H47111.1°110.8°
N09C13C14125.2°120.0°
N09C13O15117.9°120.0°
C14C13O15116.9°120.0°
C13C14C16120.7°119.9°
C13C14C18118.5°119.9°
C14C16C17119.7°120.4°
C16C14C18120.8°120.2°
C14C16H48120.1°119.7°
C16C17C20119.5°120.2°
C17C16H48120.2°119.8°
C16C17H49120.3°119.9°
C14C18C19119.4°119.6°
C14C18H50120.3°120.2°
C18C19C20120.5°119.4°
C18C19N23130.7°133.1°
C19C18H50120.3°120.2°
C17C20C19120.2°120.2°
C17C20N21131.9°133.7°
C20C17H49120.2°120.0°
C19C20N21107.9°106.1°
C20C19N23108.8°107.6°
C20N21N22106.9°106.7°
C20N21H51126.5°126.6°
N21N22N23109.6°109.5°
N22N21H51126.5°126.7°
C19N23N22106.7°110.1°
N03C24O25122.0°120.0°
N03C24C26120.2°120.0°
O25C24C26117.8°120.0°
C24C26C27120.3°120.0°
C24C26H52119.8°120.0°
C26C27C28120.6°120.0°
C27C26H52119.9°120.0°
C26C27H53119.7°120.1°
C27C28C29121.3°120.0°
C27C28C33118.0°120.1°
C28C27H53119.7°120.0°
C28C29C30120.0°120.0°
C29C28C33120.7°120.0°
C28C29H54120.0°120.0°
C29C30C31119.1°120.0°
C30C29H54120.0°120.0°
C29C30H55120.4°120.0°
C30C31C32120.8°120.1°
C30C31C34120.9°119.9°
C31C30H55120.5°120.0°
C31C32C33120.1°120.0°
C32C31C34118.3°119.9°
C31C32H56120.0°120.1°
C28C33C32119.4°120.0°
C28C33H57120.3°120.0°
C33C32H56120.0°120.0°
C32C33H57120.3°120.0°
C31C34N35178.4°180.0°
H37C01H36109.5°109.3°
H38C02H39109.5°108.2°
H41C04H40109.5°108.5°
H43C05H42109.5°107.9°
H46C10H47109.5°110.9°
H45C08H44109.5°110.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C02C01N03H37121.1°120.1°
C02C01N03H36121.1°120.2°
C02C01N03C0453.0°61.7°
C01C02C06H38120.9°121.4°
C01C02C06H39120.9°121.4°
C01C02C06C0768.9°82.4°
C01C02C06C1059.2°162.1°
C02C01N03C24127.5°118.3°
C02C01H37H36116.5°119.8°
C01C02H38H39117.2°117.3°
C01C02C06H12173.8°42.7°
C01N03C04C24179.4°180.0°
C01N03C04C0563.8°75.0°
N03C01C02C0658.2°73.9°
C01N03C24O25179.0°5.3°
C01N03C24C260.0°174.7°
N03C01H37H36116.5°119.8°
N03C01C02H38179.1°47.5°
N03C01C02H3962.8°164.7°
C01N03C04H41175.6°46.1°
C01N03C04H4056.9°164.0°
N03C04C05H41120.6°121.0°
N03C04C05H40120.6°121.0°
N03C04C05C0764.4°78.7°
C04N03C24O250.5°174.7°
C04N03C24C26179.5°5.3°
C04N03C01H37174.1°58.4°
C04N03C01H3668.1°178.1°
N03C04H41H40118.0°118.1°
N03C04C05H4357.0°159.6°
N03C04C05H42174.2°43.1°
C04C05C07H43121.4°121.8°
C04C05C07H42121.4°121.8°
C04C05C07C0629.6°37.2°
C04C05C07C0896.2°162.7°
C05C04N03C24116.8°105.0°
C05C04H41H40118.0°118.0°
C04C05H43H42115.4°116.6°
C04C05C07H11150.2°82.6°
C02C06C07C0534.3°33.0°
C02C06C07C10132.8°118.9°
C02C06C07H12117.1°125.2°
C02C06C07C08164.7°95.5°
C02C06C10H12114.6°119.7°
C02C06C10N09173.1°86.0°
C06C02C01H37179.3°46.2°
C06C02C01H3663.0°165.9°
C06C02H38H39117.2°117.4°
C02C06C07H1186.1°152.9°
C02C06C10H4654.2°32.3°
C02C06C10H4768.0°155.7°
C05C07C06C08130.5°128.5°
C05C07C06H11120.3°119.9°
C05C07C08H11113.6°115.5°
C05C07C08N09122.0°132.5°
C05C07C06C1098.6°152.0°
C07C05C04H41174.9°42.4°
C07C05C04H4056.2°160.3°
C07C05H43H42115.4°116.6°
C05C07C06H12151.4°92.1°
C05C07C08H45118.4°108.2°
C05C07C08H442.4°13.4°
C06C07C08H11109.6°112.4°
C06C07C08N0914.8°0.5°
C07C06C10H12110.3°116.2°
C07C06C10N0938.0°38.2°
C07C06C02H38170.2°39.0°
C07C06C02H3952.0°156.2°
C06C07C05H4391.8°159.0°
C06C07C05H42151.0°84.6°
C07C06C10H4680.9°156.4°
C07C06C10H47156.9°80.2°
C06C07C08H45104.8°119.7°
C06C07C08H44134.3°118.7°
C07C08N09H45119.5°119.3°
C07C08N09H44119.6°119.2°
C08C07C06C1031.9°23.4°
C07C08N09C109.1°24.3°
C07C08N09C13170.8°155.8°
C08C07C05H43142.3°75.6°
C08C07C05H4225.2°40.9°
C08C07C06H1278.1°139.3°
C07C08H45H44121.3°121.6°
C08N09C10C0628.5°38.9°
C08N09C10C13179.8°179.9°
C08N09C13C14178.7°3.6°
C08N09C13O150.2°176.3°
N09C08C07H11124.3°111.9°
C08N09C10H4690.4°157.2°
C08N09C10H47147.4°79.5°
N09C08H45H44121.4°121.5°
C06C10N09H46118.9°118.3°
C06C10N09H47118.9°118.4°
C06C10N09C13151.3°141.2°
C10C06C02H3861.7°76.4°
C10C06C02H39179.9°40.8°
C10C06C07H11141.1°88.1°
C06C10H46H47123.1°123.3°
C10N09C13C141.5°176.5°
C10N09C13O15180.0°3.6°
N09C10C06H1272.3°154.4°
N09C10H46H47123.1°123.3°
C10N09C08H45128.6°95.0°
C10N09C08H44110.5°143.5°
N09C13C14O15178.5°179.9°
N09C13C14C1659.3°154.4°
N09C13C14C18123.2°25.6°
C13N09C10H4689.8°22.9°
C13N09C10H4732.4°100.4°
C13N09C08H4551.2°84.9°
C13N09C08H4469.7°36.6°
C13C14C16C18177.4°180.0°
C13C14C16C17179.2°179.9°
C13C14C18C19178.7°179.4°
C13C14C16H480.8°0.3°
C13C14C18H501.3°0.2°
O15C13C14C16119.2°25.7°
O15C13C14C1858.3°154.3°
C14C16C17H48180.0°179.8°
C16C14C18C191.2°0.6°
C14C16C17C201.6°0.2°
C14C16C17H49178.4°179.7°
C16C14C18H50178.8°179.8°
C17C16C14C181.8°0.1°
C16C17C20H49180.0°179.9°
C16C17C20C191.0°0.1°
C16C17C20N21179.8°180.0°
C14C18C19H50180.0°179.2°
C14C18C19C200.5°0.8°
C14C18C19N23179.2°179.9°
C18C14C16H48178.2°179.7°
C18C19C20C170.4°0.6°
C18C19C20N23179.8°179.4°
C18C19C20N21179.8°179.5°
C18C19N23N22180.0°179.4°
C17C20C19N21179.4°180.0°
C17C20N21N22179.5°180.0°
C17C20C19N23179.4°180.0°
C20C17C16H48178.4°180.0°
C17C20N21H510.5°0.0°
C19C20N21N220.3°0.0°
C20C19N23N220.2°0.0°
C19C20C17H49179.0°180.0°
C20C19C18H50179.5°180.0°
C19C20N21H51179.8°180.0°
C20N21N22H51180.0°180.0°
N21C20C19N230.0°0.0°
C20N21N22N230.4°0.0°
N21C20C17H490.1°0.1°
N21N22N23C190.4°0.0°
N23C19C18H500.8°0.7°
N23N22N21H51179.6°180.0°
N03C24O25C26179.0°180.0°
N03C24C26C27139.1°174.5°
C24N03C01H376.4°121.6°
C24N03C01H36111.3°1.8°
C24N03C04H413.9°133.9°
C24N03C04H40122.6°16.0°
N03C24C26H5240.9°5.5°
O25C24C26C2739.9°5.4°
O25C24C26H52140.1°174.5°
C24C26C27H52180.0°180.0°
C24C26C27C28178.9°180.0°
C24C26C27H531.2°0.0°
C26C27C28H53180.0°180.0°
C26C27C28C295.8°180.0°
C26C27C28C33174.2°0.2°
C27C28C29C33180.0°179.8°
C27C28C29C30179.8°180.0°
C27C28C33C32179.9°179.7°
C28C27C26H521.1°0.0°
C27C28C29H540.2°0.0°
C27C28C33H570.1°0.0°
C28C29C30H54180.0°180.0°
C28C29C30C310.2°0.0°
C29C28C33C320.1°0.5°
C29C28C27H53174.2°0.0°
C28C29C30H55179.8°180.0°
C29C28C33H57179.9°179.7°
C29C30C31H55180.0°180.0°
C29C30C31C320.0°0.1°
C30C29C28C330.2°0.2°
C29C30C31C34179.4°180.0°
C30C31C32C34179.5°179.9°
C30C31C32C330.1°0.3°
C30C31C34N350.5°117.7°
C31C30C29H54179.8°180.0°
C30C31C32H56179.9°179.9°
C31C32C33C280.1°0.6°
C31C32C33H56180.0°179.7°
C32C31C34N35179.9°62.3°
C32C31C30H55179.9°179.9°
C31C32C33H57179.9°179.7°
C28C33C32H57180.0°179.8°
C33C28C27H535.8°179.7°
C33C28C29H54179.8°179.8°
C28C33C32H56179.9°179.7°
C33C32C31C34179.6°179.7°
C34C31C30H550.6°0.0°
C34C31C32H560.4°0.0°
H37C01C02H3859.8°167.6°
H37C01C02H3958.3°75.2°
H36C01C02H3857.9°72.6°
H36C01C02H39176.1°44.6°
H38C02C06H1252.9°164.1°
H39C02C06H1265.3°78.6°
H41C04C05H4363.6°79.3°
H41C04C05H4253.5°164.1°
H40C04C05H43177.7°38.6°
H40C04C05H4265.2°77.9°
H43C05C07H1128.7°39.2°
H42C05C07H1188.4°155.6°
H12C06C07H1131.0°27.8°
H12C06C10H46168.8°87.4°
H12C06C10H4746.6°36.0°
H11C07C08H454.8°7.4°
H11C07C08H44116.1°128.9°
H48C16C17H491.6°0.1°
H52C26C27H53178.8°180.0°
H54C29C30H550.2°0.0°
H56C32C33H570.1°0.0°

251174

PDB entries from 2026-03-25

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