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YN1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O10C06doub1.21Å1.19Å
C06N07sing1.34Å1.37Å
C06C05sing1.51Å1.60Å
N07C08sing1.47Å1.56Å
C04C05sing1.53Å1.57Å
C04C03sing1.53Å1.55Å
C05C09sing1.55Å1.36Å
O02C01sing1.43Å1.40Å
C01C03sing1.53Å1.53Å
C08C09sing1.54Å1.57Å
C03N11sing1.46Å1.44Å
N11C12sing1.35Å1.45Å
O31C19doub1.22Å1.20Å
C12C13sing1.51Å1.54Å
C12O32doub1.21Å1.20Å
C16C15sing1.53Å1.55Å
C23C24sing1.53Å1.53Å
C23C22sing1.53Å1.53Å
C19N18sing1.35Å1.47Å
C19O20sing1.35Å1.43Å
C13N18sing1.46Å1.45Å
C13C14sing1.53Å1.50Å
C21C22sing1.53Å1.56Å
C21O20sing1.45Å1.45Å
C24C25sing1.53Å1.52Å
C22C30sing1.53Å1.53Å
C14C15sing1.53Å1.55Å
C15C17sing1.53Å1.55Å
C25C26sing1.53Å1.56Å
C25C29sing1.53Å1.53Å
C27C26sing1.53Å1.58Å
C27C28sing1.53Å1.58Å
C30C29sing1.53Å1.54Å
C13H1sing1.09Å1.10Å
C01S1sing1.81Å1.07Å
C01H3sing1.09Å1.10Å
C03H4sing1.09Å1.10Å
C04H5sing1.09Å1.10Å
C04H6sing1.09Å1.10Å
C05H7sing1.09Å1.10Å
C08H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C09H10sing1.09Å1.10Å
C09H11sing1.09Å1.10Å
C14H12sing1.09Å1.10Å
C14H13sing1.09Å1.10Å
C15H14sing1.09Å1.10Å
C16H15sing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C16H17sing1.09Å1.10Å
C17H18sing1.09Å1.10Å
C17H19sing1.09Å1.10Å
C17H20sing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C21H22sing1.09Å1.10Å
C22H23sing1.09Å1.10Å
C23H24sing1.09Å1.10Å
C23H25sing1.09Å1.10Å
C24H26sing1.09Å1.10Å
C24H27sing1.09Å1.10Å
C25H28sing1.09Å1.10Å
C26H29sing1.09Å1.10Å
C26H30sing1.09Å1.10Å
C27H31sing1.09Å1.10Å
C27H32sing1.09Å1.10Å
C28H33sing1.09Å1.10Å
C28H34sing1.09Å1.10Å
C28H35sing1.09Å1.10Å
C29H36sing1.09Å1.10Å
C29H37sing1.09Å1.10Å
C30H38sing1.09Å1.10Å
C30H39sing1.09Å1.10Å
N07H40sing0.97Å1.00Å
N11H41sing0.97Å1.00Å
N18H42sing0.97Å1.00Å
O02H43sing0.97Å0.95Å
S1O1doub1.42Å20.67Å
S1O2doub1.42Å20.67Å
S1O3sing1.52Å20.67Å
O3H2sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O10C06N07124.9°124.9°
O10C06C05125.9°125.0°
N07C06C05109.1°110.2°
C06N07C08107.2°111.2°
C06N07H40126.4°124.4°
C06C05C04110.5°110.5°
C06C05C09107.5°104.2°
C06C05H7107.6°110.6°
N07C08C09104.8°105.5°
N07C08H8110.6°110.2°
N07C08H9110.6°110.3°
C08N07H40126.4°124.4°
C05C04C03112.7°109.5°
C04C05C09112.5°110.5°
C05C04H5108.7°109.5°
C05C04H6108.7°109.5°
C04C05H7107.9°110.5°
C04C03C01112.0°109.5°
C04C03N11110.0°109.5°
C04C03H4108.4°109.5°
C03C04H5108.6°109.4°
C03C04H6108.7°109.5°
C05C09C08106.8°101.8°
C09C05H7110.8°110.5°
C05C09H10110.1°111.0°
C05C09H11110.1°111.0°
O02C01C03109.0°109.5°
O02C01S1110.3°109.5°
O02C01H3107.6°109.4°
C01O02H43109.5°114.0°
C01C03N11107.8°109.5°
C03C01S1110.4°109.5°
C03C01H3106.1°109.5°
C01C03H4108.7°109.4°
C09C08H8110.6°110.3°
C09C08H9110.7°110.3°
C08C09H10110.2°111.0°
C08C09H11110.1°110.9°
C03N11C12121.1°120.0°
N11C03H4109.9°109.5°
C03N11H41119.4°120.0°
N11C12C13115.2°120.0°
N11C12O32121.5°120.0°
C12N11H41119.4°120.0°
O31C19N18121.0°120.0°
O31C19O20123.0°120.0°
C13C12O32123.2°120.0°
C12C13N18108.1°109.5°
C12C13C14109.3°109.4°
C12C13H1108.7°109.5°
C16C15C14111.4°109.5°
C16C15C17111.7°109.5°
C16C15H14107.9°109.4°
C15C16H15109.5°109.4°
C15C16H16109.4°109.5°
C15C16H17109.5°109.5°
C24C23C22112.4°109.4°
C23C24C25109.6°109.5°
C24C23H24108.7°109.5°
C24C23H25108.7°109.5°
C23C24H26109.4°109.5°
C23C24H27109.4°109.5°
C23C22C21108.4°109.5°
C23C22C30113.8°109.4°
C23C22H23108.4°109.5°
C22C23H24108.7°109.4°
C22C23H25108.7°109.5°
N18C19O20115.9°120.0°
C19N18C13118.4°120.0°
C19N18H42120.8°120.0°
C19O20C21115.7°117.0°
N18C13C14111.7°109.5°
N18C13H1109.9°109.5°
C13N18H42120.8°120.0°
C13C14C15110.0°109.5°
C14C13H1109.2°109.5°
C13C14H12109.3°109.5°
C13C14H13109.3°109.5°
C22C21O20107.7°109.4°
C21C22C30109.7°109.4°
C22C21H21109.9°109.5°
C22C21H22109.9°109.5°
C21C22H23107.9°109.5°
O20C21H21109.9°109.5°
O20C21H22109.9°109.5°
C24C25C26110.8°109.5°
C24C25C29111.5°109.4°
C25C24H26109.5°109.5°
C25C24H27109.4°109.5°
C24C25H28108.5°109.5°
C22C30C29115.0°109.5°
C30C22H23108.4°109.5°
C22C30H38108.1°109.5°
C22C30H39108.1°109.5°
C14C15C17109.8°109.5°
C15C14H12109.3°109.5°
C15C14H13109.3°109.5°
C14C15H14108.0°109.5°
C17C15H14107.9°109.4°
C15C17H18109.5°109.4°
C15C17H19109.5°109.5°
C15C17H20109.5°109.5°
C26C25C29109.3°109.4°
C25C26C27111.8°109.5°
C26C25H28108.1°109.5°
C25C26H29108.9°109.5°
C25C26H30108.9°109.5°
C25C29C30114.1°109.4°
C29C25H28108.5°109.5°
C25C29H36108.3°109.5°
C25C29H37108.3°109.4°
C26C27C28112.1°109.5°
C27C26H29108.9°109.5°
C27C26H30108.9°109.4°
C26C27H31108.8°109.5°
C26C27H32108.8°109.5°
C28C27H31108.8°109.4°
C28C27H32108.8°109.5°
C27C28H33109.5°109.5°
C27C28H34109.4°109.5°
C27C28H35109.5°109.5°
C30C29H36108.3°109.5°
C30C29H37108.3°109.5°
C29C30H38108.1°109.5°
C29C30H39108.1°109.5°
S1C01H3113.3°109.5°
C01S1O1119.1°110.5°
C01S1O2119.1°110.5°
C01S1O3119.1°104.5°
H5C04H6109.5°109.5°
H8C08H9109.5°110.2°
H10C09H11109.5°110.9°
H12C14H13109.5°109.5°
H15C16H16109.5°109.5°
H15C16H17109.5°109.5°
H16C16H17109.5°109.5°
H18C17H19109.5°109.4°
H18C17H20109.5°109.4°
H19C17H20109.5°109.5°
H21C21H22109.5°109.5°
H24C23H25109.5°109.5°
H26C24H27109.5°109.4°
H29C26H30109.5°109.4°
H31C27H32109.5°109.5°
H33C28H34109.5°109.5°
H33C28H35109.4°109.4°
H34C28H35109.5°109.4°
H36C29H37109.5°109.5°
H38C30H39109.5°109.4°
O1S1O20.0°121.0°
O1S1O30.0°104.3°
O2S1O30.0°104.3°
S1O3H290.0°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O10C06N07C05179.9°179.9°
O10C06N07C08180.0°179.5°
O10C06C05C0442.9°45.1°
O10C06C05C09166.1°163.8°
O10C06C05H774.6°77.5°
O10C06N07H400.0°0.4°
C06N07C08H40180.0°180.0°
N07C06C05C04137.1°134.9°
N07C06C05C0914.0°16.3°
C06N07C08C0911.9°17.0°
N07C06C05H7105.3°102.5°
C06N07C08H8107.4°136.0°
C06N07C08H9131.2°102.0°
C05C06N07C080.0°0.4°
C06C05C04C09120.2°114.8°
C06C05C04H7117.3°122.7°
C06C05C04C03178.5°180.0°
C06C05C09H7117.3°118.8°
C06C05C09C0820.9°24.8°
C06C05C04H561.0°60.0°
C06C05C04H658.0°60.0°
C06C05C09H1098.7°93.3°
C06C05C09H11140.5°142.9°
C05C06N07H40180.0°179.6°
N07C08C09C0520.9°25.4°
N07C08C09H8119.3°119.0°
N07C08C09H9119.2°119.1°
N07C08H8H9122.1°122.0°
N07C08C09H1098.6°92.7°
N07C08C09H11140.5°143.5°
C05C04C03H5120.5°120.0°
C05C04C03H6120.5°120.0°
C04C05C09H7120.8°122.5°
C05C04C03C01171.6°174.6°
C04C05C09C08142.8°143.5°
C05C04C03N1168.5°65.4°
C05C04C03H451.7°54.6°
C05C04H5H6118.5°120.0°
C04C05C09H1023.2°25.3°
C04C05C09H1197.7°98.4°
C03C04C05C0961.3°65.2°
C04C03C01O0266.5°55.0°
C04C03C01N11121.2°120.0°
C04C03C01H4119.8°120.0°
C04C03N11H4119.3°120.0°
C04C03N11C12110.8°153.3°
C04C03C01S154.8°65.0°
C04C03C01H3177.9°175.0°
C03C04H5H6118.5°120.0°
C03C04C05H761.2°57.3°
C04C03N11H4169.2°26.8°
C05C09C08H10119.5°118.1°
C05C09C08H11119.6°118.1°
C09C05C04H559.2°174.8°
C09C05C04H6178.2°54.8°
C05C09C08H898.3°144.4°
C05C09C08H9140.2°93.7°
C05C09H10H11121.3°123.8°
O02C01C03S1121.3°120.0°
O02C01C03H3115.6°120.0°
O02C01C03N11172.3°175.0°
O02C01S1H3120.7°119.9°
O02C01C03H453.3°65.0°
O02C01S1O121.9°56.7°
O02C01S1O221.9°166.6°
O02C01S1O321.9°55.0°
C01C03N11H4118.3°120.0°
C01C03N11C12126.8°86.7°
C03C01S1H3118.8°120.1°
C01C03C04H551.2°65.4°
C01C03C04H667.9°54.5°
C01C03N11H4153.2°93.2°
C03C01O02H43180.0°60.0°
C03C01S1O198.6°63.3°
C03C01S1O298.6°73.4°
C03C01S1O398.6°175.0°
C08C09C05H796.4°94.0°
C09C08H8H9122.2°122.0°
C08C09H10H11121.3°123.8°
C09C08N07H40168.1°163.0°
C03N11C12H41180.0°180.0°
C03N11C12C13179.8°180.0°
C03N11C12O320.5°0.1°
N11C03C01S166.4°55.0°
N11C03C01H356.7°65.0°
N11C03C04H5171.0°54.6°
N11C03C04H652.0°174.5°
N11C12C13O32179.6°179.9°
N11C12C13N18139.0°180.0°
N11C12C13C1499.3°60.0°
N11C12C13H119.9°59.9°
C12N11C03H48.5°33.2°
O31C19N18O20179.6°180.0°
O31C19N18C1329.0°0.0°
O31C19O20C2113.6°0.0°
O31C19N18H42151.0°180.0°
C12C13N18C1945.6°155.0°
C12C13N18C14120.2°120.0°
C12C13N18H1118.4°120.0°
C12C13C14H1118.8°120.0°
C12C13C14C15170.8°175.0°
C12C13C14H1269.1°65.0°
C12C13C14H1350.8°55.0°
C13C12N11H410.2°0.1°
C12C13N18H42134.4°25.0°
O32C12C13N1840.6°0.0°
O32C12C13C1481.1°120.1°
O32C12C13H1159.8°120.0°
O32C12N11H41179.4°180.0°
C16C15C14C1374.2°175.0°
C16C15C14C17124.3°120.1°
C16C15C14H14118.3°119.9°
C16C15C17H14118.5°120.0°
C16C15C14H12165.7°55.0°
C16C15C14H1345.9°65.0°
C15C16H15H16120.0°120.0°
C15C16H15H17120.0°120.0°
C15C16H16H17120.0°120.0°
C16C15C17H18180.0°60.0°
C16C15C17H1960.0°180.0°
C16C15C17H2060.0°59.9°
C24C23C22H24120.4°120.0°
C24C23C22H25120.5°120.0°
C24C23C22C21171.9°180.0°
C23C24C25H26120.0°120.1°
C23C24C25H27120.0°120.0°
C24C23C22C3049.5°60.0°
C23C24C25C26179.0°180.0°
C23C24C25C2959.0°60.0°
C24C23C22H2371.3°60.0°
C24C23H24H25118.6°120.0°
C23C24H26H27119.9°120.0°
C23C24C25H2860.4°60.0°
C23C22C21C30124.8°119.9°
C23C22C21H23117.2°120.0°
C23C22C21O20179.7°65.0°
C22C23C24C2558.7°60.1°
C23C22C30H23120.7°120.0°
C23C22C30C2940.3°60.0°
C23C22C21H2160.0°175.0°
C23C22C21H2260.6°55.0°
C22C23H24H25118.7°120.0°
C22C23C24H2661.3°60.0°
C22C23C24H27178.7°179.9°
C23C22C30H3880.5°60.0°
C23C22C30H39161.1°180.0°
C19N18C13H42180.0°180.0°
C19N18C13C14165.9°85.0°
N18C19O20C21166.0°180.0°
C19N18C13H172.8°35.0°
O20C19N18C13151.3°180.0°
C19O20C21C22108.2°179.9°
C19O20C21H21132.0°60.0°
C19O20C21H2211.5°60.0°
O20C19N18H4228.7°0.0°
N18C13C14H1121.7°120.0°
N18C13C14C1569.7°65.0°
N18C13C14H1250.4°55.0°
N18C13C14H13170.3°175.0°
C13C14C15H12120.1°120.0°
C13C14C15H13120.1°120.0°
C13C14C15C17161.5°65.0°
C13C14H12H13119.8°120.0°
C13C14C15H1444.1°55.0°
C14C13N18H4214.1°95.0°
C22C21O20H21119.7°120.0°
C22C21O20H22119.7°120.0°
C21C22C30H23117.6°120.1°
C21C22C30C29161.9°180.0°
C22C21H21H22120.9°120.0°
C21C22C23H2451.4°60.1°
C21C22C23H2567.7°60.0°
C21C22C30H3841.1°60.0°
C21C22C30H3977.2°60.0°
O20C21C22C3054.9°175.0°
O20C21H21H22120.8°120.0°
O20C21C22H2363.1°55.0°
C24C25C26C29123.3°119.9°
C24C25C26H28118.8°120.0°
C24C25C29H28119.4°120.0°
C24C25C26C2778.3°175.0°
C24C25C29C3050.7°60.0°
C25C24C23H2461.7°180.0°
C25C24C23H25179.2°60.0°
C25C24H26H27119.9°120.0°
C24C25C26H29161.4°64.9°
C24C25C26H3042.1°55.0°
C24C25C29H3670.0°60.0°
C24C25C29H37171.4°180.0°
C22C30C29C2541.2°60.1°
C22C30C29H38120.8°120.0°
C22C30C29H39120.8°120.0°
C30C22C21H2164.9°55.0°
C30C22C21H22174.6°65.0°
C30C22C23H2471.0°180.0°
C30C22C23H25169.9°60.0°
C22C30C29H3679.5°60.0°
C22C30C29H37161.9°180.0°
C22C30H38H39117.4°120.0°
C14C15C17H14117.5°120.0°
C15C14C13H152.1°55.0°
C15C14H12H13119.7°120.0°
C14C15C16H15180.0°60.0°
C14C15C16H1660.0°180.0°
C14C15C16H1760.0°59.9°
C14C15C17H1855.9°60.0°
C14C15C17H1964.1°60.0°
C14C15C17H20175.9°179.9°
C17C15C14H1241.4°175.0°
C17C15C14H1378.4°55.1°
C17C15C16H1556.8°60.0°
C17C15C16H1663.2°59.9°
C17C15C16H17176.8°180.0°
C15C17H18H19120.0°120.0°
C15C17H18H20120.0°120.0°
C15C17H19H20120.0°120.1°
C26C25C29H28117.7°120.0°
C25C26C27H29120.3°120.1°
C25C26C27H30120.4°120.0°
C25C26C27C28167.0°180.0°
C26C25C29C30173.6°180.0°
C26C25C24H2661.0°59.9°
C26C25C24H2759.0°60.0°
C25C26H29H30118.9°120.0°
C25C26C27H3172.7°60.0°
C25C26C27H3246.5°60.0°
C26C25C29H3652.9°60.0°
C26C25C29H3765.7°60.0°
C29C25C26C27158.4°65.0°
C25C29C30H36120.7°120.0°
C25C29C30H37120.7°119.9°
C29C25C24H2661.0°60.0°
C29C25C24H27179.0°180.0°
C29C25C26H2938.1°55.0°
C29C25C26H3081.2°175.0°
C25C29H36H37117.9°120.0°
C25C29C30H3879.6°60.0°
C25C29C30H39162.0°179.9°
C26C27C28H31120.4°120.0°
C26C27C28H32120.4°120.0°
C27C26C25H2840.5°55.0°
C27C26H29H30118.9°119.9°
C26C27H31H32118.8°120.0°
C26C27C28H33180.0°60.0°
C26C27C28H3460.0°60.0°
C26C27C28H3560.0°180.0°
C28C27C26H2946.6°60.0°
C28C27C26H3072.7°60.0°
C28C27H31H32118.8°120.0°
C27C28H33H34120.0°120.1°
C27C28H33H35120.0°120.0°
C27C28H34H35120.0°120.0°
C29C30C22H2380.4°59.9°
C30C29C25H2868.7°60.0°
C30C29H36H37117.9°120.0°
C29C30H38H39117.5°120.0°
H1C13C14H12172.2°175.0°
H1C13C14H1368.0°65.0°
H1C13N18H42107.2°145.0°
S1C01C03H4174.6°175.0°
S1C01O02H4358.7°60.0°
C01S1O1O290.0°131.5°
C01S1O1O390.0°111.8°
C01S1O2O390.0°111.7°
C01S1O3H290.0°180.0°
H3C01C03H462.4°55.0°
H3C01O02H4365.4°180.0°
H3C01S1O1142.7°176.6°
H3C01S1O2142.7°46.7°
H3C01S1O3142.7°64.9°
H4C03C04H568.8°174.6°
H4C03C04H6172.2°65.4°
H4C03N11H41171.5°146.8°
H5C04C05H7178.4°62.7°
H6C04C05H759.4°177.3°
H7C05C09H10144.0°147.8°
H7C05C09H1123.2°24.1°
H8C08C09H10142.1°26.3°
H8C08C09H1121.3°97.5°
H8C08N07H4072.6°44.0°
H9C08C09H1020.6°148.2°
H9C08C09H11100.2°24.5°
H9C08N07H4048.9°77.9°
H12C14C15H1476.0°65.0°
H13C14C15H14164.2°175.0°
H14C15C16H1561.6°180.0°
H14C15C16H16178.4°60.0°
H14C15C16H1758.4°60.0°
H14C15C17H1861.5°180.0°
H14C15C17H19178.5°60.0°
H14C15C17H2058.5°60.1°
H15C16H16H17120.0°120.0°
H18C17H19H20120.0°119.9°
H21C21C22H23177.2°65.0°
H22C21C22H2356.6°175.0°
H23C22C23H24168.3°60.0°
H23C22C23H2549.2°180.0°
H23C22C30H38158.8°180.0°
H23C22C30H3940.4°60.0°
H24C23C24H26178.2°60.0°
H24C23C24H2758.3°60.0°
H25C23C24H2659.1°180.0°
H25C23C24H2760.8°60.0°
H26C24C25H28179.6°180.0°
H27C24C25H2859.6°60.0°
H28C25C26H2979.8°175.0°
H28C25C26H30160.9°65.0°
H28C25C29H36170.6°179.9°
H28C25C29H3751.9°60.0°
H29C26C27H31167.0°179.9°
H29C26C27H3273.8°60.0°
H30C26C27H3147.7°60.0°
H30C26C27H32166.9°180.0°
H31C27C28H3359.6°180.0°
H31C27C28H34179.6°59.9°
H31C27C28H3560.4°60.1°
H32C27C28H3359.6°60.0°
H32C27C28H3460.4°180.0°
H32C27C28H35179.6°60.0°
H33C28H34H35120.0°119.9°
H36C29C30H38159.7°180.0°
H36C29C30H3941.3°60.0°
H37C29C30H3841.1°60.0°
H37C29C30H3977.3°60.0°
O1S1O2O390.0°116.8°
O1S1O3H290.0°63.9°
O2S1O3H290.0°64.0°

224931

PDB entries from 2024-09-11

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