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YMA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O8C2doub1.21Å1.39Å
C2O7sing1.34Å1.35Å
C2C1sing1.51Å1.53Å
O7HO7sing0.97Å0.95Å
C1N1sing1.47Å1.45Å
C1H11sing1.09Å1.12Å
C1H12sing1.09Å1.11Å
N1C10sing1.47Å1.48Å
N1C3sing1.47Å1.48Å
C10C11sing1.53Å1.55Å
C10H101sing1.09Å1.11Å
C10H102sing1.09Å1.11Å
C11N3sing1.47Å1.48Å
C11H111sing1.09Å1.12Å
C11H112sing1.09Å1.12Å
N3C14sing1.47Å1.50Å
N3C12sing1.47Å1.48Å
C14C15sing1.51Å1.33Å
C14H141sing1.09Å1.11Å
C14H142sing1.09Å1.11Å
C15N5sing1.35Å1.37Å
C15O6doub1.21Å1.19Å
N5C16sing1.46Å1.55Å
N5HN5sing0.97Å1.02Å
C16C18sing1.53Å1.65Å
C16H161sing1.09Å1.11Å
C16H162sing1.09Å1.11Å
C18S2sing1.81Å1.82Å
C18H181sing1.09Å1.12Å
C18H182sing1.09Å1.12Å
S2HS2sing1.34Å0.95Å
C12C13sing1.51Å1.49Å
C12H121sing1.09Å1.11Å
C12H122sing1.09Å1.11Å
C13O4sing1.34Å1.39Å
C13O3doub1.21Å1.34Å
O4HO4sing0.97Å0.95Å
C3C4sing1.53Å1.55Å
C3H31sing1.09Å1.12Å
C3H32sing1.09Å1.11Å
C4N2sing1.47Å1.31Å
C4H41sing1.09Å1.12Å
C4H42sing1.09Å1.11Å
N2C5sing1.47Å1.58Å
N2C7sing1.47Å1.54Å
C5C6sing1.51Å1.49Å
C5H51sing1.09Å1.12Å
C5H52sing1.09Å1.11Å
C6O2doub1.21Å1.39Å
C6O1sing1.34Å1.34Å
O1HO1sing0.97Å0.95Å
C7C8sing1.51Å1.65Å
C7H71sing1.09Å1.11Å
C7H72sing1.09Å1.12Å
C8O5doub1.21Å1.60Å
C8N4sing1.35Å1.32Å
N4C9sing1.46Å1.56Å
N4HN4sing0.97Å1.02Å
C9C17sing1.53Å1.59Å
C9H91sing1.09Å1.12Å
C9H92sing1.09Å1.12Å
C17S1sing1.81Å1.83Å
C17H171sing1.09Å1.12Å
C17H172sing1.09Å1.12Å
S1HS1sing1.34Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O8C2O7120.9°120.0°
O8C2C1121.4°120.0°
O7C2C1117.7°120.0°
C2O7HO7120.9°120.0°
C2C1N1112.8°109.5°
C2C1H11111.0°109.4°
C2C1H12111.0°109.5°
N1C1H11111.0°109.5°
N1C1H12111.0°109.4°
C1N1C10121.7°106.7°
C1N1C3116.8°106.8°
H11C1H1299.4°109.4°
C10N1C3121.4°106.7°
N1C10C11112.8°109.5°
N1C10H101111.0°109.4°
N1C10H102111.0°109.5°
N1C3C4113.5°109.5°
N1C3H31110.7°109.4°
N1C3H32110.7°109.5°
C11C10H101111.0°109.4°
C11C10H102111.0°109.5°
C10C11N3115.6°109.5°
C10C11H111110.0°109.4°
C10C11H112110.0°109.5°
H101C10H10299.4°109.5°
N3C11H111110.0°109.4°
N3C11H112110.0°109.5°
C11N3C14118.5°106.7°
C11N3C12120.8°106.7°
H111C11H112100.2°109.4°
C14N3C12120.6°106.7°
N3C14C15118.0°109.5°
N3C14H141109.1°109.5°
N3C14H142109.1°109.5°
N3C12C13113.4°109.5°
N3C12H121110.8°109.4°
N3C12H122110.8°109.4°
C15C14H141109.1°109.5°
C15C14H142109.1°109.4°
C14C15N5101.0°120.0°
C14C15O6133.3°120.0°
H141C14H142100.9°109.5°
N5C15O6125.3°120.0°
C15N5C16133.0°120.0°
C15N5HN5105.2°120.0°
C16N5HN5121.8°120.1°
N5C16C18154.9°109.5°
N5C16H16197.4°109.4°
N5C16H16297.3°109.5°
C18C16H16197.3°109.4°
C18C16H16297.3°109.5°
C16C18S2108.4°109.5°
C16C18H181112.6°109.4°
C16C18H182112.6°109.5°
H161C16H162108.2°109.5°
S2C18H181112.6°109.5°
S2C18H182112.6°109.5°
C18S2HS2108.4°100.0°
H181C18H18297.8°109.5°
C13C12H121110.8°109.5°
C13C12H122110.8°109.5°
C12C13O4120.8°120.0°
C12C13O3118.8°120.0°
H121C12H12299.6°109.4°
O4C13O3120.4°120.1°
C13O4HO4120.9°120.0°
C4C3H31110.7°109.4°
C4C3H32110.8°109.5°
C3C4N2114.6°109.5°
C3C4H41110.3°109.4°
C3C4H42110.3°109.5°
H31C3H3299.6°109.5°
N2C4H41110.4°109.4°
N2C4H42110.3°109.6°
C4N2C5125.1°106.7°
C4N2C7122.6°106.7°
H41C4H42100.0°109.4°
C5N2C7112.2°106.6°
N2C5C6116.1°109.4°
N2C5H51109.8°109.5°
N2C5H52109.8°109.5°
N2C7C8107.2°109.5°
N2C7H71113.0°109.5°
N2C7H72113.1°109.5°
C6C5H51109.8°109.5°
C6C5H52109.8°109.5°
C5C6O2119.9°120.0°
C5C6O1119.2°120.0°
H51C5H52100.4°109.4°
O2C6O1120.9°120.0°
C6O1HO1119.2°120.0°
C8C7H71113.0°109.5°
C8C7H72113.0°109.4°
C7C8O5118.1°120.0°
C7C8N4142.2°120.0°
H71C7H7297.4°109.4°
O5C8N495.2°120.0°
C8N4C9134.3°120.0°
C8N4HN4101.7°120.0°
C9N4HN4124.0°120.0°
N4C9C17144.1°109.5°
N4C9H91100.6°109.5°
N4C9H92100.6°109.5°
C17C9H91100.6°109.5°
C17C9H92100.6°109.4°
C9C17S1128.5°109.5°
C9C17H171105.6°109.4°
C9C17H172105.6°109.4°
H91C9H92106.8°109.4°
S1C17H171105.6°109.5°
S1C17H172105.6°109.5°
C17S1HS1128.5°100.1°
H171C17H172103.7°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O8C2O7C1179.6°179.9°
O8C2O7HO7180.0°0.1°
O8C2C1N195.7°6.6°
O8C2C1H11139.0°113.4°
O8C2C1H1229.5°126.6°
O7C2C1N183.8°173.3°
O7C2C1H1141.4°66.7°
O7C2C1H12150.9°53.3°
C1C2O7HO70.4°180.0°
C2C1N1H11125.3°120.0°
C2C1N1H12125.2°120.1°
C2C1H11H12116.9°120.0°
C2C1N1C1093.8°160.2°
C2C1N1C388.0°86.0°
N1C1H11H12116.9°119.9°
C1N1C10C3178.1°113.9°
C1N1C10C1151.8°76.0°
C1N1C10H101177.1°43.9°
C1N1C10H10273.5°164.0°
C1N1C3C4150.9°74.1°
C1N1C3H3125.6°45.7°
C1N1C3H3283.8°165.8°
H11C1N1C10140.9°40.3°
H11C1N1C337.2°154.1°
H12C1N1C1031.4°79.7°
H12C1N1C3146.7°34.1°
N1C10C11H101125.3°119.9°
N1C10C11H102125.3°120.1°
N1C10H101H102116.8°120.0°
N1C10C11N3126.6°177.3°
N1C10C11H111108.1°62.7°
N1C10C11H1121.4°57.2°
C10N1C3C430.9°172.0°
C10N1C3H31156.2°68.1°
C10N1C3H3294.3°51.9°
C3N1C10C11130.2°170.2°
C3N1C10H1014.9°69.9°
C3N1C10H102104.6°50.1°
N1C3C4H31125.3°119.9°
N1C3C4H32125.3°120.1°
N1C3H31H32116.5°120.1°
N1C3C4N2135.3°173.3°
N1C3C4H4199.4°53.4°
N1C3C4H4210.1°66.6°
C11C10H101H102116.9°120.0°
C10C11N3H111125.3°120.0°
C10C11N3H112125.3°120.1°
C10C11H111H112115.8°120.0°
C10C11N3C14149.0°180.0°
C10C11N3C1235.3°66.1°
H101C10C11N31.4°57.3°
H101C10C11H111126.6°177.3°
H101C10C11H112123.9°62.7°
H102C10C11N3108.1°62.7°
H102C10C11H11117.1°57.3°
H102C10C11H112126.6°177.2°
N3C11H111H112115.8°120.0°
C11N3C14C12175.8°113.8°
C11N3C14C15145.1°165.4°
C11N3C14H14189.6°45.4°
C11N3C14H14219.8°74.6°
C11N3C12C1375.7°83.8°
C11N3C12H12149.6°36.3°
C11N3C12H122159.1°156.2°
H111C11N3C1485.8°60.0°
H111C11N3C1290.0°53.8°
H112C11N3C1423.7°60.0°
H112C11N3C12160.5°173.8°
N3C14C15H141125.3°120.0°
N3C14C15H142125.3°120.0°
N3C14H141H142114.8°120.0°
N3C14C15N5173.4°179.0°
N3C14C15O614.4°0.9°
C14N3C12C13108.6°162.4°
C14N3C12H121126.1°77.6°
C14N3C12H12216.6°42.3°
C12N3C14C1539.1°80.8°
C12N3C14H14186.2°159.2°
C12N3C14H142164.4°39.1°
N3C12C13H121125.2°120.0°
N3C12C13H122125.2°120.0°
N3C12H121H122116.6°119.9°
N3C12C13O4125.5°172.2°
N3C12C13O353.8°7.7°
C15C14H141H142114.9°120.0°
C14C15N5O6173.1°180.0°
C14C15N5C1618.9°180.0°
C14C15N5HN5161.1°0.0°
H141C14C15N548.1°59.1°
H141C14C15O6139.6°120.9°
H142C14C15N561.3°60.9°
H142C14C15O6110.9°119.1°
C15N5C16HN5180.0°179.9°
C15N5C16C1855.0°180.0°
C15N5C16H16170.2°60.1°
C15N5C16H162179.7°60.0°
O6C15N5C16154.2°0.0°
O6C15N5HN525.8°180.0°
N5C16C18H161125.3°119.9°
N5C16C18H162125.3°120.0°
N5C16H161H162100.2°120.1°
N5C16C18S249.0°180.0°
N5C16C18H18176.2°60.1°
N5C16C18H182174.3°60.0°
HN5N5C16C18125.0°0.1°
HN5N5C16H161109.8°120.0°
HN5N5C16H1620.3°119.9°
C18C16H161H162100.2°120.0°
C16C18S2H181125.3°119.9°
C16C18S2H182125.3°120.0°
C16C18H181H182118.5°120.0°
C16C18S2HS2180.0°180.0°
H161C16C18S2174.3°60.0°
H161C16C18H18149.0°180.0°
H161C16C18H18260.4°60.0°
H162C16C18S276.2°60.0°
H162C16C18H181158.5°60.0°
H162C16C18H18249.0°180.0°
S2C18H181H182118.5°120.0°
H181C18S2HS254.7°60.1°
H182C18S2HS254.7°60.0°
C13C12H121H122116.7°120.0°
C12C13O4O3179.3°180.0°
C12C13O4HO4180.0°180.0°
H121C12C13O40.3°52.2°
H121C12C13O3179.0°127.7°
H122C12C13O4109.2°67.7°
H122C12C13O371.5°112.3°
O3C13O4HO40.7°0.0°
C4C3H31H32116.6°120.0°
C3C4N2H41125.3°119.9°
C3C4N2H42125.2°120.1°
C3C4H41H42116.2°120.0°
C3C4N2C52.9°66.3°
C3C4N2C7178.2°180.0°
H31C3C4N210.1°66.8°
H31C3C4H41135.3°173.3°
H31C3C4H42115.2°53.3°
H32C3C4N299.4°53.2°
H32C3C4H4125.8°66.7°
H32C3C4H42135.3°173.3°
N2C4H41H42116.2°120.1°
C4N2C5C7175.8°113.7°
C4N2C5C6117.9°82.8°
C4N2C5H517.4°157.2°
C4N2C5H52116.8°37.2°
C4N2C7C8104.4°166.3°
C4N2C7H71130.3°46.3°
C4N2C7H7220.9°73.7°
H41C4N2C5122.4°173.8°
H41C4N2C752.9°60.1°
H42C4N2C5128.1°53.8°
H42C4N2C756.6°59.9°
N2C5C6H51125.3°120.0°
N2C5C6H52125.3°120.0°
N2C5H51H52115.6°120.0°
N2C5C6O2104.4°7.4°
N2C5C6O174.9°172.6°
C5N2C7C879.7°80.0°
C5N2C7H7145.5°160.0°
C5N2C7H72155.0°40.0°
C7N2C5C666.4°163.4°
C7N2C5H51168.4°43.4°
C7N2C5H5258.9°76.6°
N2C7C8H71125.2°120.0°
N2C7C8H72125.3°120.0°
N2C7H71H72119.0°120.0°
N2C7C8O560.4°5.3°
N2C7C8N488.3°174.8°
C6C5H51H52115.6°120.0°
C5C6O2O1179.2°180.0°
C5C6O1HO1180.0°180.0°
H51C5C6O2130.3°112.6°
H51C5C6O150.4°67.4°
H52C5C6O220.9°127.4°
H52C5C6O1159.9°52.6°
O2C6O1HO10.8°0.0°
C8C7H71H72119.0°120.0°
C7C8O5N4161.3°180.0°
C7C8N4C9138.1°180.0°
C7C8N4HN441.9°0.0°
H71C7C8O5174.3°114.7°
H71C7C8N437.0°65.2°
H72C7C8O564.9°125.3°
H72C7C8N4146.5°54.7°
O5C8N4C914.5°0.0°
O5C8N4HN4165.5°179.9°
C8N4C9HN4180.0°180.0°
C8N4C9C17110.7°180.0°
C8N4C9H91124.1°60.0°
C8N4C9H9214.6°60.0°
N4C9C17H91125.3°120.1°
N4C9C17H92125.3°120.0°
N4C9H91H92104.6°120.0°
N4C9C17S168.7°180.0°
N4C9C17H171166.0°60.0°
N4C9C17H17256.6°60.0°
HN4N4C9C1769.3°0.0°
HN4N4C9H9155.9°120.1°
HN4N4C9H92165.4°120.0°
C17C9H91H92104.6°119.9°
C9C17S1H171125.3°120.0°
C9C17S1H172125.3°120.0°
C9C17H171H172110.8°119.9°
C9C17S1HS1180.0°180.0°
H91C9C17S156.5°59.9°
H91C9C17H17168.7°180.0°
H91C9C17H172178.2°60.1°
H92C9C17S1166.0°60.0°
H92C9C17H17140.7°60.0°
H92C9C17H17268.7°180.0°
S1C17H171H172110.8°120.0°
H171C17S1HS154.7°60.0°
H172C17S1HS154.7°60.0°

248636

PDB entries from 2026-02-04

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