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YM2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAACAMsing1.53Å1.53Å
CAMOAVsing1.43Å1.43Å
OAVNATsing1.42Å1.46Å
NATCADdoub1.29Å1.34Å
CADCAYsing1.48Å1.39Å
CAYCAJsing1.40Å1.39ÅAromatic
CAYCAIdoub1.40Å1.39ÅAromatic
CAJCALdoub1.38Å1.39ÅAromatic
CALCAZsing1.39Å1.39ÅAromatic
CAICAKsing1.38Å1.39ÅAromatic
CAKCAZdoub1.39Å1.39ÅAromatic
CAZOAWsing1.36Å1.36Å
OAWCANsing1.43Å1.43Å
CANCAOsing1.53Å1.53Å
CAOCBBsing1.53Å1.53Å
CBBCABsing1.53Å1.53Å
CBBCAPsing1.53Å1.53Å
CAPCAQsing1.53Å1.53Å
CAQNBCsing1.47Å1.48Å
NBCCAXsing1.34Å1.33Å
NBCCARsing1.47Å1.48Å
CAXOACdoub1.22Å1.23Å
CAXNBDsing1.34Å1.33Å
CARCASsing1.54Å1.53Å
CASNBDsing1.47Å1.48Å
NBDCBAsing1.40Å1.33Å
CBACAGdoub1.39Å1.39ÅAromatic
CBACAHsing1.39Å1.39ÅAromatic
CAGCAEsing1.38Å1.39ÅAromatic
CAENAUdoub1.32Å1.40ÅAromatic
NAUCAFsing1.32Å1.40ÅAromatic
CAFCAHdoub1.38Å1.39ÅAromatic
CAAHAA1sing1.09Å1.10Å
CAAHAA2sing1.09Å1.10Å
CAAHAA3sing1.09Å1.10Å
CAMHAM1sing1.09Å1.10Å
CAMHAM2sing1.09Å1.10Å
CADHAD1sing1.08Å1.08Å
CAJHAJsing1.08Å1.08Å
CAIHAIsing1.08Å1.08Å
CALHALsing1.08Å1.08Å
CAKHAKsing1.08Å1.08Å
CANHAN1sing1.09Å1.10Å
CANHAN2sing1.09Å1.10Å
CAOHAO1sing1.09Å1.10Å
CAOHAO2sing1.09Å1.10Å
CBBHBBsing1.09Å1.10Å
CABHAB1sing1.09Å1.10Å
CABHAB2sing1.09Å1.10Å
CABHAB3sing1.09Å1.10Å
CAPHAP1sing1.09Å1.10Å
CAPHAP2sing1.09Å1.10Å
CAQHAQ1sing1.09Å1.10Å
CAQHAQ2sing1.09Å1.10Å
CARHAR1sing1.09Å1.10Å
CARHAR2sing1.09Å1.10Å
CASHAS1sing1.09Å1.10Å
CASHAS2sing1.09Å1.10Å
CAGHAGsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAACAMOAV109.0°109.5°
CAMCAAHAA1109.5°109.5°
CAMCAAHAA2109.5°109.5°
CAMCAAHAA3109.4°109.4°
CAACAMHAM1109.6°109.5°
CAACAMHAM2109.6°109.4°
CAMOAVNAT109.9°114.0°
OAVCAMHAM1109.6°109.5°
OAVCAMHAM2109.6°109.5°
OAVNATCAD116.6°120.0°
NATCADCAY115.2°120.0°
NATCADHAD1122.4°120.1°
CADCAYCAJ120.2°120.1°
CADCAYCAI119.9°120.1°
CAYCADHAD1122.4°120.0°
CAJCAYCAI119.8°119.8°
CAYCAJCAL119.6°119.9°
CAYCAJHAJ120.2°120.0°
CAYCAICAK120.5°119.9°
CAYCAIHAI119.8°120.0°
CAJCALCAZ120.6°120.1°
CALCAJHAJ120.2°120.1°
CAJCALHAL119.7°119.9°
CALCAZCAK119.7°120.2°
CALCAZOAW118.8°119.9°
CAZCALHAL119.7°119.9°
CAICAKCAZ119.7°120.1°
CAKCAIHAI119.7°120.1°
CAICAKHAK120.1°119.9°
CAKCAZOAW120.6°119.9°
CAZCAKHAK120.1°120.0°
CAZOAWCAN112.7°117.0°
OAWCANCAO107.8°109.4°
OAWCANHAN1109.9°109.5°
OAWCANHAN2109.9°109.5°
CANCAOCBB109.0°109.4°
CAOCANHAN1109.9°109.5°
CAOCANHAN2109.9°109.4°
CANCAOHAO1109.6°109.5°
CANCAOHAO2109.6°109.5°
CAOCBBCAB109.1°109.5°
CAOCBBCAP108.4°109.5°
CBBCAOHAO1109.6°109.5°
CBBCAOHAO2109.6°109.5°
CAOCBBHBB110.1°109.5°
CABCBBCAP109.0°109.5°
CABCBBHBB110.1°109.5°
CBBCABHAB1109.5°109.5°
CBBCABHAB2109.5°109.5°
CBBCABHAB3109.5°109.5°
CBBCAPCAQ108.8°109.5°
CAPCBBHBB110.1°109.5°
CBBCAPHAP1109.6°109.4°
CBBCAPHAP2109.6°109.5°
CAPCAQNBC110.9°109.5°
CAQCAPHAP1109.6°109.5°
CAQCAPHAP2109.6°109.5°
CAPCAQHAQ1109.1°109.5°
CAPCAQHAQ2109.1°109.5°
CAQNBCCAX126.7°125.4°
CAQNBCCAR124.5°125.5°
NBCCAQHAQ1109.1°109.5°
NBCCAQHAQ2109.1°109.4°
CAXNBCCAR108.4°109.2°
NBCCAXOAC122.9°123.1°
NBCCAXNBD112.9°113.9°
NBCCARCAS100.9°103.9°
NBCCARHAR1111.6°110.6°
NBCCARHAR2111.5°110.5°
OACCAXNBD124.1°123.0°
CAXNBDCAS107.7°109.2°
CAXNBDCBA128.0°125.4°
CARCASNBD101.7°103.9°
CASCARHAR1111.6°110.6°
CASCARHAR2111.6°110.5°
CARCASHAS1111.4°110.5°
CARCASHAS2111.4°110.6°
CASNBDCBA123.9°125.4°
NBDCASHAS1111.4°110.4°
NBDCASHAS2111.4°110.7°
NBDCBACAG119.5°120.8°
NBDCBACAH120.5°120.9°
CAGCBACAH119.7°118.3°
CBACAGCAE120.5°119.1°
CBACAGHAG119.8°120.4°
CBACAHCAF120.4°119.1°
CBACAHHAH119.8°120.5°
CAGCAENAU119.9°120.9°
CAECAGHAG119.8°120.5°
CAGCAEHAE120.1°119.5°
CAENAUCAF119.5°121.9°
NAUCAEHAE120.0°119.6°
NAUCAFCAH120.0°120.8°
NAUCAFHAF120.0°119.6°
CAFCAHHAH119.8°120.4°
CAHCAFHAF120.0°119.6°
HAA1CAAHAA2109.5°109.5°
HAA1CAAHAA3109.5°109.5°
HAA2CAAHAA3109.5°109.5°
HAM1CAMHAM2109.5°109.4°
HAN1CANHAN2109.5°109.5°
HAO1CAOHAO2109.5°109.5°
HAB1CABHAB2109.5°109.4°
HAB1CABHAB3109.4°109.5°
HAB2CABHAB3109.5°109.5°
HAP1CAPHAP2109.5°109.5°
HAQ1CAQHAQ2109.5°109.4°
HAR1CARHAR2109.4°110.6°
HAS1CASHAS2109.4°110.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAACAMOAVHAM1119.9°120.0°
CAACAMOAVHAM2119.9°120.0°
CAACAMOAVNAT137.3°180.0°
CAMCAAHAA1HAA2120.0°120.0°
CAMCAAHAA1HAA3120.0°119.9°
CAMCAAHAA2HAA3120.0°120.0°
CAACAMHAM1HAM2120.2°120.0°
CAMOAVNATCAD139.8°180.0°
OAVCAMCAAHAA1180.0°60.1°
OAVCAMCAAHAA260.0°60.0°
OAVCAMCAAHAA360.0°180.0°
OAVCAMHAM1HAM2120.2°120.0°
OAVNATCADCAY179.9°180.0°
NATOAVCAMHAM117.4°60.0°
NATOAVCAMHAM2102.8°60.0°
OAVNATCADHAD10.1°0.0°
NATCADCAYHAD1180.0°180.0°
NATCADCAYCAJ0.0°180.0°
NATCADCAYCAI179.2°0.3°
CADCAYCAJCAI179.2°179.7°
CADCAYCAJCAL178.8°180.0°
CADCAYCAICAK178.2°180.0°
CADCAYCAJHAJ1.2°0.0°
CADCAYCAIHAI1.8°0.0°
CAYCAJCALHAJ180.0°180.0°
CAYCAJCALCAZ1.2°0.1°
CAJCAYCAICAK1.0°0.3°
CAJCAYCADHAD1179.9°0.0°
CAJCAYCAIHAI179.0°179.7°
CAYCAJCALHAL178.8°180.0°
CAICAYCAJCAL0.4°0.2°
CAYCAICAKHAI180.0°180.0°
CAYCAICAKCAZ0.1°0.0°
CAICAYCADHAD10.9°179.7°
CAICAYCAJHAJ179.6°179.7°
CAYCAICAKHAK179.9°180.0°
CAJCALCAZHAL180.0°179.9°
CAJCALCAZCAK2.1°0.4°
CAJCALCAZOAW166.6°180.0°
CALCAZCAKCAI1.5°0.4°
CALCAZCAKOAW168.5°179.7°
CALCAZOAWCAN179.6°180.0°
CAZCALCAJHAJ178.8°179.9°
CALCAZCAKHAK178.5°179.7°
CAICAKCAZHAK180.0°180.0°
CAICAKCAZOAW167.1°180.0°
CAKCAZOAWCAN10.9°0.3°
CAZCAKCAIHAI179.9°180.0°
CAKCAZCALHAL177.8°179.7°
CAZOAWCANCAO171.2°180.0°
OAWCAZCALHAL13.4°0.1°
OAWCAZCAKHAK12.9°0.0°
CAZOAWCANHAN151.5°60.1°
CAZOAWCANHAN269.1°60.0°
OAWCANCAOHAN1119.8°120.0°
OAWCANCAOHAN2119.7°120.0°
OAWCANCAOCBB174.8°180.0°
OAWCANHAN1HAN2120.8°120.1°
OAWCANCAOHAO165.3°60.0°
OAWCANCAOHAO254.9°60.0°
CANCAOCBBHAO1119.9°120.0°
CANCAOCBBHAO2119.9°120.0°
CANCAOCBBCAB76.6°65.0°
CANCAOCBBCAP164.8°175.0°
CAOCANHAN1HAN2120.8°120.0°
CANCAOHAO1HAO2120.2°120.0°
CANCAOCBBHBB44.3°55.0°
CAOCBBCABCAP118.3°120.0°
CAOCBBCABHBB120.9°120.0°
CAOCBBCAPHBB120.5°120.0°
CAOCBBCAPCAQ161.1°175.0°
CBBCAOCANHAN155.0°60.0°
CBBCAOCANHAN265.5°60.0°
CBBCAOHAO1HAO2120.2°120.0°
CAOCBBCABHAB1180.0°60.0°
CAOCBBCABHAB260.0°180.0°
CAOCBBCABHAB360.0°60.0°
CAOCBBCAPHAP179.1°65.0°
CAOCBBCAPHAP241.2°55.0°
CABCBBCAPHBB120.8°120.0°
CABCBBCAPCAQ80.2°65.0°
CABCBBCAOHAO143.3°55.0°
CABCBBCAOHAO2163.5°175.0°
CBBCABHAB1HAB2120.0°120.0°
CBBCABHAB1HAB3120.0°120.0°
CBBCABHAB2HAB3120.0°120.0°
CABCBBCAPHAP139.6°55.0°
CABCBBCAPHAP2159.9°175.0°
CBBCAPCAQHAP1119.9°120.0°
CBBCAPCAQHAP2119.9°120.0°
CBBCAPCAQNBC179.3°180.0°
CAPCBBCAOHAO175.3°65.0°
CAPCBBCAOHAO244.9°55.0°
CAPCBBCABHAB161.7°60.0°
CAPCBBCABHAB2178.2°60.0°
CAPCBBCABHAB358.2°180.0°
CBBCAPHAP1HAP2120.3°120.0°
CBBCAPCAQHAQ159.1°60.0°
CBBCAPCAQHAQ260.4°60.0°
CAPCAQNBCHAQ1120.2°120.1°
CAPCAQNBCHAQ2120.2°120.0°
CAPCAQNBCCAX130.5°90.1°
CAPCAQNBCCAR40.3°90.3°
CAQCAPCBBHBB40.6°55.0°
CAQCAPHAP1HAP2120.3°120.0°
CAPCAQHAQ1HAQ2119.3°120.0°
CAQNBCCAXCAR172.0°179.7°
CAQNBCCAXOAC1.4°0.0°
CAQNBCCAXNBD177.7°180.0°
CAQNBCCARCAS163.6°180.0°
NBCCAQCAPHAP160.8°60.0°
NBCCAQCAPHAP259.4°60.0°
NBCCAQHAQ1HAQ2119.4°119.9°
CAQNBCCARHAR145.0°61.4°
CAQNBCCARHAR277.7°61.4°
NBCCAXOACNBD179.1°180.0°
CAXNBCCARCAS24.1°0.3°
NBCCAXNBDCAS9.3°0.1°
NBCCAXNBDCBA178.4°180.0°
CAXNBCCAQHAQ110.3°30.0°
CAXNBCCAQHAQ2109.3°149.9°
CAXNBCCARHAR1142.7°118.3°
CAXNBCCARHAR294.5°118.9°
CARNBCCAXOAC170.6°179.7°
CARNBCCAXNBD10.2°0.3°
NBCCARCASHAR1118.6°118.6°
NBCCARCASHAR2118.6°118.6°
NBCCARCASNBD27.7°0.2°
CARNBCCAQHAQ1160.6°149.7°
CARNBCCAQHAQ279.9°29.7°
NBCCARHAR1HAR2123.9°122.8°
NBCCARCASHAS191.1°118.6°
NBCCARCASHAS2146.4°118.6°
OACCAXNBDCAS169.8°179.9°
OACCAXNBDCBA2.5°0.1°
CAXNBDCASCAR23.7°0.1°
CAXNBDCASCBA172.7°179.9°
CAXNBDCBACAG173.2°0.0°
CAXNBDCBACAH0.9°179.8°
CAXNBDCASHAS195.1°118.6°
CAXNBDCASHAS2142.4°118.6°
CARCASNBDHAS1118.8°118.5°
CARCASNBDHAS2118.8°118.7°
CARCASNBDCBA163.6°179.8°
CASCARHAR1HAR2124.0°122.8°
CARCASHAS1HAS2123.6°122.8°
CASNBDCBACAG2.0°179.9°
CASNBDCBACAH172.1°0.1°
NBDCASCARHAR1146.3°118.4°
NBDCASCARHAR290.9°118.8°
NBDCASHAS1HAS2123.6°122.9°
NBDCBACAGCAH174.1°179.8°
NBDCBACAGCAE175.9°180.0°
NBDCBACAHCAF176.3°179.7°
CBANBDCASHAS177.6°61.4°
CBANBDCASHAS244.8°61.4°
NBDCBACAGHAG4.1°0.0°
NBDCBACAHHAH3.7°0.1°
CBACAGCAEHAG180.0°180.0°
CBACAGCAENAU0.0°0.1°
CAGCBACAHCAF2.2°0.5°
CAGCBACAHHAH177.7°179.7°
CBACAGCAEHAE180.0°179.9°
CAHCBACAGCAE1.8°0.2°
CBACAHCAFNAU0.9°0.5°
CBACAHCAFHAH180.0°179.8°
CAHCBACAGHAG178.2°179.8°
CBACAHCAFHAF179.1°179.7°
CAGCAENAUHAE180.0°180.0°
CAGCAENAUCAF1.4°0.1°
CAENAUCAFCAH0.9°0.2°
NAUCAECAGHAG179.9°179.9°
CAENAUCAFHAF179.1°180.0°
NAUCAFCAHHAF180.0°179.8°
NAUCAFCAHHAH179.1°179.7°
CAFNAUCAEHAE178.6°179.9°
HAA1CAAHAA2HAA3120.0°120.0°
HAA1CAACAMHAM160.1°60.0°
HAA1CAACAMHAM260.0°179.9°
HAA2CAACAMHAM159.9°180.0°
HAA2CAACAMHAM2179.9°60.0°
HAA3CAACAMHAM1179.9°60.0°
HAA3CAACAMHAM259.9°60.0°
HAJCAJCALHAL1.2°0.1°
HAICAICAKHAK0.1°0.0°
HAN1CANCAOHAO1175.0°180.0°
HAN1CANCAOHAO264.9°60.0°
HAN2CANCAOHAO154.5°60.0°
HAN2CANCAOHAO2174.6°180.0°
HAO1CAOCBBHBB164.3°175.0°
HAO2CAOCBBHBB75.6°65.0°
HBBCBBCABHAB159.1°180.0°
HBBCBBCABHAB260.9°60.0°
HBBCBBCABHAB3179.1°60.0°
HBBCBBCAPHAP1160.5°175.0°
HBBCBBCAPHAP279.3°65.0°
HAB1CABHAB2HAB3119.9°120.0°
HAP1CAPCAQHAQ1179.0°180.0°
HAP1CAPCAQHAQ259.5°60.0°
HAP2CAPCAQHAQ160.8°60.0°
HAP2CAPCAQHAQ2179.7°180.0°
HAR1CARCASHAS127.5°0.0°
HAR1CARCASHAS294.9°122.8°
HAR2CARCASHAS1150.3°122.8°
HAR2CARCASHAS227.8°0.0°
HAGCAGCAEHAE0.1°0.1°
HAHCAHCAFHAF0.9°0.1°

222415

PDB entries from 2024-07-10

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