Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YLV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F32C31sing1.35Å1.36Å
F30C29sing1.35Å1.37Å
O10C06doub1.21Å1.19Å
C31C29doub1.39Å1.40ÅAromatic
C31C22sing1.38Å1.40ÅAromatic
C29C27sing1.39Å1.39ÅAromatic
C22C21sing1.51Å1.56Å
C22C23doub1.38Å1.38ÅAromatic
C21O20sing1.45Å1.43Å
C27F28sing1.35Å1.37Å
C27C25doub1.39Å1.39ÅAromatic
C06N07sing1.35Å1.37Å
C06C05sing1.52Å1.62Å
N07C08sing1.38Å1.57Å
O33C19doub1.21Å1.19Å
C23C25sing1.39Å1.40ÅAromatic
C23F24sing1.35Å1.36Å
C25F26sing1.35Å1.36Å
O20C19sing1.35Å1.42Å
C19N18sing1.35Å1.45Å
C05C04sing1.53Å1.55Å
C05C09sing1.51Å1.35Å
C08C09doub1.32Å1.57Å
C04C03sing1.53Å1.55Å
C16C15sing1.53Å1.57Å
N18C13sing1.46Å1.44Å
C13C12sing1.51Å1.53Å
C13C14sing1.53Å1.54Å
N11C12sing1.35Å1.48Å
N11C03sing1.46Å1.45Å
C12O34doub1.21Å1.20Å
C03C01sing1.53Å1.54Å
C15C14sing1.53Å1.57Å
C15C17sing1.53Å1.53Å
C01O02sing1.43Å1.41Å
C01S1sing1.81Å1.07Å
C01H2sing1.09Å1.10Å
C03H3sing1.09Å1.10Å
C04H4sing1.09Å1.10Å
C04H5sing1.09Å1.10Å
C05H6sing1.09Å1.10Å
C08H7sing1.08Å1.08Å
C09H8sing1.08Å1.08Å
C13H9sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C14H11sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C16H13sing1.09Å1.10Å
C16H14sing1.09Å1.10Å
C16H15sing1.09Å1.10Å
C17H16sing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C17H18sing1.09Å1.10Å
C21H19sing1.09Å1.10Å
C21H20sing1.09Å1.10Å
N07H21sing0.97Å1.00Å
N11H22sing0.97Å1.00Å
N18H23sing0.97Å1.00Å
O02H24sing0.97Å0.95Å
S1O1doub1.42Å34.16Å
S1O2doub1.42Å34.16Å
S1O3sing1.52Å34.16Å
O3H1sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F32C31C29119.4°120.0°
F32C31C22120.7°120.0°
F30C29C31120.1°120.0°
F30C29C27119.8°120.0°
O10C06N07124.7°127.1°
O10C06C05125.8°127.2°
C29C31C22119.9°120.0°
C31C29C27120.0°120.0°
C31C22C21121.5°120.0°
C31C22C23119.8°120.0°
C29C27F28119.9°120.0°
C29C27C25120.0°120.0°
C21C22C23118.7°120.0°
C22C21O20110.8°109.4°
C22C21H19109.1°109.5°
C22C21H20109.1°109.5°
C22C23C25120.3°120.1°
C22C23F24119.0°120.0°
C21O20C19111.2°117.0°
O20C21H19109.2°109.5°
O20C21H20109.1°109.5°
F28C27C25120.1°120.0°
C27C25C23119.9°119.9°
C27C25F26119.9°120.0°
N07C06C05109.5°105.7°
C06N07C08107.1°111.6°
C06N07H21126.4°124.2°
C06C05C04109.5°110.6°
C06C05C09108.4°103.7°
C06C05H6108.0°110.7°
N07C08C09105.8°112.5°
N07C08H7127.1°123.7°
C08N07H21126.5°124.2°
O33C19O20120.8°120.0°
O33C19N18120.3°120.0°
C25C23F24120.7°120.0°
C23C25F26120.1°120.0°
O20C19N18118.9°120.0°
C19N18C13118.4°120.0°
C19N18H23120.8°120.0°
C04C05C09110.3°110.6°
C05C04C03113.6°109.5°
C05C04H4108.4°109.5°
C05C04H5108.4°109.5°
C04C05H6108.8°110.5°
C05C09C08107.8°106.6°
C09C05H6111.7°110.6°
C05C09H8126.1°126.7°
C09C08H7127.1°123.8°
C08C09H8126.1°126.7°
C04C03N11113.1°109.5°
C04C03C01111.8°109.5°
C04C03H3108.1°109.4°
C03C04H4108.4°109.4°
C03C04H5108.4°109.4°
C16C15C14110.1°109.5°
C16C15C17111.8°109.5°
C16C15H12107.9°109.5°
C15C16H13109.5°109.5°
C15C16H14109.5°109.5°
C15C16H15109.5°109.5°
N18C13C12109.8°109.5°
N18C13C14110.0°109.5°
N18C13H9110.3°109.5°
C13N18H23120.8°120.0°
C12C13C14108.6°109.5°
C13C12N11116.5°120.0°
C13C12O34120.9°120.0°
C12C13H9109.2°109.4°
C13C14C15111.2°109.5°
C14C13H9108.9°109.5°
C13C14H10109.1°109.5°
C13C14H11109.0°109.4°
C12N11C03120.6°120.0°
N11C12O34122.6°120.0°
C12N11H22119.7°120.1°
N11C03C01106.2°109.5°
N11C03H3109.3°109.5°
C03N11H22119.7°120.0°
C03C01O02107.3°109.5°
C03C01S1110.6°109.5°
C03C01H2106.3°109.5°
C01C03H3108.2°109.5°
C14C15C17110.7°109.5°
C15C14H10109.0°109.5°
C15C14H11109.1°109.5°
C14C15H12107.9°109.5°
C17C15H12108.4°109.5°
C15C17H16109.5°109.5°
C15C17H17109.5°109.5°
C15C17H18109.5°109.5°
O02C01S1110.6°109.5°
O02C01H2107.9°109.5°
C01O02H24109.5°114.0°
S1C01H2113.8°109.5°
C01S1O1137.9°110.5°
C01S1O2137.9°110.5°
C01S1O3137.9°104.4°
H4C04H5109.5°109.5°
H10C14H11109.5°109.5°
H13C16H14109.5°109.4°
H13C16H15109.4°109.5°
H14C16H15109.5°109.4°
H16C17H17109.4°109.4°
H16C17H18109.4°109.4°
H17C17H18109.5°109.4°
H19C21H20109.5°109.5°
O1S1O20.0°121.1°
O1S1O30.0°104.3°
O2S1O30.0°104.3°
S1O3H190.0°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F32C31C29F300.0°0.2°
F32C31C29C22179.9°179.5°
F32C31C29C27179.8°180.0°
F32C31C22C210.0°0.2°
F32C31C22C23179.6°179.9°
F30C29C31C27179.8°179.7°
F30C29C31C22179.9°179.7°
F30C29C27F280.2°0.0°
F30C29C27C25179.7°180.0°
O10C06N07C05179.1°180.0°
O10C06N07C08179.3°180.0°
O10C06C05C0452.7°61.5°
O10C06C05C09173.1°180.0°
O10C06C05H665.7°61.3°
O10C06N07H210.7°0.1°
C29C31C22C21180.0°179.8°
C29C31C22C230.3°0.6°
C31C29C27F28180.0°179.8°
C31C29C27C250.1°0.2°
C22C31C29C270.1°0.5°
C31C22C21C23179.6°179.7°
C31C22C21O2096.8°90.3°
C31C22C23C250.3°0.3°
C31C22C23F24179.8°179.8°
C31C22C21H1923.4°29.7°
C31C22C21H20143.0°149.7°
C29C27F28C25179.9°180.0°
C29C27C25C230.2°0.0°
C29C27C25F26180.0°180.0°
C22C21O20H19120.2°120.0°
C22C21O20H20120.2°120.0°
C21C22C23C25179.9°180.0°
C21C22C23F240.2°0.1°
C22C21O20C19171.2°180.0°
C22C21H19H20119.4°120.0°
C23C22C21O2083.6°90.0°
C22C23C25C270.0°0.0°
C22C23C25F24179.9°179.9°
C22C23C25F26179.8°179.9°
C23C22C21H19156.2°150.0°
C23C22C21H2036.6°30.0°
C21O20C19O3376.8°0.1°
C21O20C19N18102.5°180.0°
O20C21H19H20119.4°120.0°
F28C27C25C23180.0°180.0°
F28C27C25F260.1°0.0°
C27C25C23F26179.8°180.0°
C27C25C23F24179.9°179.9°
C06N07C08H21180.0°180.0°
N07C06C05C04128.2°118.6°
N07C06C05C097.8°0.0°
C06N07C08C096.4°0.0°
N07C06C05H6113.4°118.6°
C06N07C08H7173.6°180.0°
C05C06N07C080.2°0.0°
C06C05C04C09119.2°114.2°
C06C05C04H6117.9°122.9°
C06C05C09H6119.0°118.7°
C06C05C09C0811.5°0.0°
C06C05C04C03174.3°179.7°
C06C05C04H465.1°60.4°
C06C05C04H553.6°59.7°
C06C05C09H8168.5°180.0°
C05C06N07H21179.9°180.0°
N07C08C09C0511.5°0.0°
N07C08C09H7180.0°179.9°
N07C08C09H8168.5°180.0°
O33C19O20N18179.3°180.0°
O33C19N18C1313.2°0.0°
O33C19N18H23166.8°180.0°
F24C23C25F260.1°0.0°
O20C19N18C13167.4°180.0°
C19O20C21H1968.6°60.0°
C19O20C21H2051.0°60.0°
O20C19N18H2312.5°0.0°
C19N18C13H23180.0°180.0°
C19N18C13C1256.8°155.0°
C19N18C13C14176.3°85.0°
C19N18C13H963.5°35.1°
C04C05C09H6121.2°122.8°
C04C05C09C08131.4°118.5°
C05C04C03H4120.6°120.0°
C05C04C03H5120.6°120.0°
C05C04C03N1162.8°63.7°
C05C04C03C01177.3°176.3°
C05C04C03H358.3°56.3°
C05C04H4H5118.1°120.1°
C04C05C09H848.6°61.4°
C05C09C08H8180.0°179.9°
C09C05C04C0366.5°65.4°
C09C05C04H454.1°174.6°
C09C05C04H5172.8°54.6°
C05C09C08H7168.5°180.0°
C08C09C05H6107.4°118.7°
C09C08N07H21173.6°180.0°
C04C03N11C12105.2°148.5°
C04C03N11C01123.0°120.0°
C04C03N11H3120.5°120.0°
C04C03C01H3118.9°120.0°
C04C03C01O02174.6°175.0°
C04C03C01S164.6°65.0°
C04C03C01H259.4°55.0°
C03C04H4H5118.1°119.9°
C03C04C05H656.4°57.4°
C04C03N11H2274.8°31.5°
C16C15C14C1369.8°175.0°
C16C15C14C17124.0°120.0°
C16C15C14H12117.5°120.0°
C16C15C17H12118.8°120.0°
C16C15C14H10169.9°55.0°
C16C15C14H1150.4°65.0°
C15C16H13H14120.0°120.0°
C15C16H13H15120.0°120.1°
C15C16H14H15120.0°120.1°
C16C15C17H16180.0°180.0°
C16C15C17H1760.0°60.0°
C16C15C17H1860.0°60.0°
N18C13C12C14120.3°120.0°
N18C13C12H9121.0°120.0°
N18C13C14H9121.0°120.0°
N18C13C12N11145.3°180.0°
N18C13C12O3433.4°0.0°
N18C13C14C1562.1°65.0°
N18C13C14H1058.1°55.0°
N18C13C14H11177.6°175.0°
C12C13C14H9118.8°120.0°
C13C12N11O34178.7°180.0°
C13C12N11C03179.8°180.0°
C12C13C14C15177.7°175.0°
C12C13C14H1062.0°65.0°
C12C13C14H1157.4°55.0°
C13C12N11H220.2°0.0°
C12C13N18H23123.2°25.0°
C14C13C12N1194.3°60.0°
C14C13C12O3486.9°120.0°
C13C14C15H10120.3°120.1°
C13C14C15H11120.2°119.9°
C13C14C15C17166.2°65.0°
C13C14H10H11119.2°120.0°
C13C14C15H1247.7°55.0°
C14C13N18H233.7°95.0°
C12N11C03H22180.0°179.9°
C12N11C03C01131.7°91.5°
C12N11C03H315.2°28.6°
N11C12C13H924.3°60.0°
C03N11C12O341.4°0.0°
N11C03C01H3117.2°120.0°
N11C03C01O0261.5°65.0°
N11C03C01S159.3°55.0°
N11C03C01H2176.7°174.9°
N11C03C04H4176.6°56.3°
N11C03C04H557.8°176.3°
O34C12C13H9154.4°120.0°
O34C12N11H22178.6°180.0°
C03C01O02S1120.8°120.0°
C03C01O02H2114.1°120.0°
C03C01S1H2119.6°120.0°
C01C03C04H456.7°63.7°
C01C03C04H562.0°56.3°
C01C03N11H2248.3°88.5°
C03C01O02H24180.0°60.0°
C03C01S1O176.4°68.4°
C03C01S1O276.4°68.4°
C03C01S1O376.4°180.0°
C14C15C17H12118.2°120.0°
C15C14C13H958.9°55.0°
C15C14H10H11119.2°120.0°
C14C15C16H13180.0°60.1°
C14C15C16H1460.0°180.0°
C14C15C16H1560.0°60.0°
C14C15C17H1656.9°60.0°
C14C15C17H1763.0°180.0°
C14C15C17H18176.9°60.0°
C17C15C14H1045.9°175.0°
C17C15C14H1173.6°55.0°
C17C15C16H1356.6°60.0°
C17C15C16H1463.4°60.0°
C17C15C16H15176.6°180.0°
C15C17H16H17120.0°120.0°
C15C17H16H18120.0°120.1°
C15C17H17H18120.0°120.1°
O02C01S1H2121.7°120.0°
O02C01C03H355.7°55.0°
O02C01S1O1164.8°171.6°
O02C01S1O2164.8°51.6°
O02C01S1O3164.8°60.0°
S1C01C03H3176.5°175.0°
S1C01O02H2459.2°60.0°
C01S1O1O290.0°131.5°
C01S1O1O390.0°111.7°
C01S1O2O390.0°111.7°
C01S1O3H190.0°180.0°
H2C01C03H359.5°65.0°
H2C01O02H2465.9°180.0°
H2C01S1O143.2°51.6°
H2C01S1O243.2°171.6°
H2C01S1O343.2°60.0°
H3C03C04H462.3°176.3°
H3C03C04H5179.0°63.7°
H3C03N11H22164.7°151.5°
H4C04C05H6177.0°62.6°
H5C04C05H664.2°177.4°
H6C05C09H872.6°61.3°
H7C08C09H811.5°0.1°
H7C08N07H216.4°0.1°
H9C13C14H10179.2°175.1°
H9C13C14H1161.4°64.9°
H9C13N18H23116.5°144.9°
H10C14C15H1272.6°65.0°
H11C14C15H12168.0°175.0°
H12C15C16H1362.4°179.9°
H12C15C16H14177.6°60.0°
H12C15C16H1557.6°60.0°
H12C15C17H1661.3°60.0°
H12C15C17H17178.8°60.0°
H12C15C17H1858.7°180.0°
H13C16H14H15119.9°120.0°
H16C17H17H18120.0°119.9°
O1S1O2O390.0°116.8°
O1S1O3H190.0°64.0°
O2S1O3H190.0°63.9°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon