YLQ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C01 | C02 | sing | 1.51Å | 1.49Å | |
C02 | C03 | sing | 1.38Å | 1.36Å | Aromatic |
C02 | C25 | doub | 1.38Å | 1.44Å | Aromatic |
C03 | C04 | doub | 1.38Å | 1.44Å | Aromatic |
C04 | C05 | sing | 1.39Å | 1.42Å | Aromatic |
C05 | O06 | sing | 1.36Å | 1.36Å | |
C05 | C24 | doub | 1.39Å | 1.40Å | Aromatic |
O06 | C07 | sing | 1.43Å | 1.39Å | |
C07 | C08 | sing | 1.53Å | 1.48Å | |
C08 | N09 | sing | 1.46Å | 1.49Å | |
N09 | C10 | sing | 1.37Å | 1.36Å | Aromatic |
N09 | C23 | sing | 1.39Å | 1.38Å | Aromatic |
C10 | S11 | sing | 1.76Å | 1.74Å | |
C10 | N17 | doub | 1.31Å | 1.34Å | Aromatic |
S11 | C12 | sing | 1.81Å | 1.82Å | |
C12 | C13 | sing | 1.53Å | 1.48Å | |
C13 | C14 | sing | 1.51Å | 1.49Å | |
C14 | O15 | doub | 1.21Å | 1.24Å | |
C14 | O16 | sing | 1.34Å | 1.28Å | |
N17 | C18 | sing | 1.36Å | 1.37Å | Aromatic |
C18 | C19 | doub | 1.40Å | 1.41Å | Aromatic |
C18 | C23 | sing | 1.40Å | 1.39Å | Aromatic |
C19 | C20 | sing | 1.38Å | 1.38Å | Aromatic |
C20 | C21 | doub | 1.39Å | 1.38Å | Aromatic |
C21 | C22 | sing | 1.38Å | 1.41Å | Aromatic |
C22 | C23 | doub | 1.39Å | 1.40Å | Aromatic |
C24 | C25 | sing | 1.38Å | 1.40Å | Aromatic |
C01 | H011 | sing | 1.09Å | 1.10Å | |
C01 | H012 | sing | 1.09Å | 1.10Å | |
C01 | H013 | sing | 1.09Å | 1.10Å | |
C03 | H03 | sing | 1.08Å | 1.08Å | |
C25 | H25 | sing | 1.08Å | 1.08Å | |
C04 | H04 | sing | 1.08Å | 1.08Å | |
C24 | H24 | sing | 1.08Å | 1.08Å | |
C07 | H071 | sing | 1.09Å | 1.10Å | |
C07 | H072 | sing | 1.09Å | 1.10Å | |
C08 | H081 | sing | 1.09Å | 1.10Å | |
C08 | H082 | sing | 1.09Å | 1.10Å | |
C12 | H121 | sing | 1.09Å | 1.10Å | |
C12 | H122 | sing | 1.09Å | 1.10Å | |
C13 | H131 | sing | 1.09Å | 1.10Å | |
C13 | H132 | sing | 1.09Å | 1.10Å | |
O16 | H16 | sing | 0.97Å | 0.95Å | |
C19 | H19 | sing | 1.08Å | 1.08Å | |
C20 | H20 | sing | 1.08Å | 1.08Å | |
C21 | H21 | sing | 1.08Å | 1.08Å | |
C22 | H22 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C01 | C02 | C03 | 120.3° | 120.0° |
C01 | C02 | C25 | 120.1° | 119.9° |
C02 | C01 | H011 | 109.5° | 109.4° |
C02 | C01 | H012 | 109.4° | 109.5° |
C02 | C01 | H013 | 109.5° | 109.4° |
C03 | C02 | C25 | 119.6° | 120.1° |
C02 | C03 | C04 | 119.5° | 120.0° |
C02 | C03 | H03 | 120.3° | 120.0° |
C02 | C25 | C24 | 121.1° | 120.0° |
C02 | C25 | H25 | 119.4° | 120.0° |
C03 | C04 | C05 | 120.6° | 120.0° |
C04 | C03 | H03 | 120.2° | 120.0° |
C03 | C04 | H04 | 119.7° | 120.0° |
C04 | C05 | O06 | 121.1° | 120.0° |
C04 | C05 | C24 | 119.4° | 119.9° |
C05 | C04 | H04 | 119.7° | 120.0° |
O06 | C05 | C24 | 119.5° | 120.1° |
C05 | O06 | C07 | 122.5° | 117.0° |
C05 | C24 | C25 | 119.8° | 119.9° |
C05 | C24 | H24 | 120.1° | 120.1° |
O06 | C07 | C08 | 116.0° | 109.5° |
O06 | C07 | H071 | 107.8° | 109.5° |
O06 | C07 | H072 | 107.8° | 109.5° |
C07 | C08 | N09 | 121.3° | 109.5° |
C08 | C07 | H071 | 107.8° | 109.4° |
C08 | C07 | H072 | 107.8° | 109.5° |
C07 | C08 | H081 | 106.4° | 109.5° |
C07 | C08 | H082 | 106.4° | 109.5° |
C08 | N09 | C10 | 126.7° | 126.4° |
C08 | N09 | C23 | 127.2° | 126.4° |
N09 | C08 | H081 | 106.5° | 109.4° |
N09 | C08 | H082 | 106.4° | 109.5° |
C10 | N09 | C23 | 106.1° | 107.2° |
N09 | C10 | S11 | 124.5° | 125.1° |
N09 | C10 | N17 | 111.5° | 109.9° |
N09 | C23 | C18 | 107.6° | 106.1° |
N09 | C23 | C22 | 131.2° | 133.9° |
S11 | C10 | N17 | 124.0° | 125.0° |
C10 | S11 | C12 | 102.6° | 100.0° |
C10 | N17 | C18 | 106.8° | 109.6° |
S11 | C12 | C13 | 121.7° | 109.4° |
S11 | C12 | H121 | 106.4° | 109.5° |
S11 | C12 | H122 | 106.3° | 109.5° |
C12 | C13 | C14 | 120.7° | 109.5° |
C13 | C12 | H121 | 106.3° | 109.5° |
C13 | C12 | H122 | 106.3° | 109.5° |
C12 | C13 | H131 | 106.6° | 109.5° |
C12 | C13 | H132 | 106.6° | 109.5° |
C13 | C14 | O15 | 121.0° | 120.0° |
C13 | C14 | O16 | 118.6° | 120.0° |
C14 | C13 | H131 | 106.6° | 109.4° |
C14 | C13 | H132 | 106.6° | 109.5° |
O15 | C14 | O16 | 120.4° | 120.0° |
C14 | O16 | H16 | 109.5° | 117.0° |
N17 | C18 | C19 | 131.0° | 133.3° |
N17 | C18 | C23 | 108.1° | 107.2° |
C19 | C18 | C23 | 121.0° | 119.5° |
C18 | C19 | C20 | 117.3° | 119.8° |
C18 | C19 | H19 | 121.3° | 120.1° |
C18 | C23 | C22 | 121.3° | 120.0° |
C19 | C20 | C21 | 122.2° | 120.5° |
C20 | C19 | H19 | 121.3° | 120.1° |
C19 | C20 | H20 | 118.9° | 119.8° |
C20 | C21 | C22 | 120.9° | 120.4° |
C21 | C20 | H20 | 118.9° | 119.7° |
C20 | C21 | H21 | 119.5° | 119.8° |
C21 | C22 | C23 | 117.3° | 119.8° |
C22 | C21 | H21 | 119.5° | 119.7° |
C21 | C22 | H22 | 121.3° | 120.1° |
C23 | C22 | H22 | 121.4° | 120.1° |
C24 | C25 | H25 | 119.5° | 119.9° |
C25 | C24 | H24 | 120.1° | 120.0° |
H011 | C01 | H012 | 109.5° | 109.5° |
H011 | C01 | H013 | 109.5° | 109.5° |
H012 | C01 | H013 | 109.5° | 109.6° |
H071 | C07 | H072 | 109.5° | 109.5° |
H081 | C08 | H082 | 109.5° | 109.5° |
H121 | C12 | H122 | 109.5° | 109.5° |
H131 | C13 | H132 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C01 | C02 | C03 | C25 | 179.6° | 179.8° |
C01 | C02 | C03 | C04 | 179.2° | 180.0° |
C01 | C02 | C25 | C24 | 179.6° | 179.8° |
C02 | C01 | H011 | H012 | 120.0° | 120.0° |
C02 | C01 | H011 | H013 | 120.0° | 119.9° |
C02 | C01 | H012 | H013 | 120.0° | 120.0° |
C01 | C02 | C03 | H03 | 0.8° | 0.0° |
C01 | C02 | C25 | H25 | 0.4° | 0.1° |
C02 | C03 | C04 | H03 | 180.0° | 179.9° |
C02 | C03 | C04 | C05 | 0.8° | 0.0° |
C03 | C02 | C25 | C24 | 0.1° | 0.5° |
C03 | C02 | C01 | H011 | 90.2° | 90.0° |
C03 | C02 | C01 | H012 | 149.8° | 150.0° |
C03 | C02 | C01 | H013 | 29.8° | 30.0° |
C03 | C02 | C25 | H25 | 179.9° | 179.7° |
C02 | C03 | C04 | H04 | 179.2° | 179.9° |
C25 | C02 | C03 | C04 | 0.4° | 0.3° |
C02 | C25 | C24 | C05 | 0.1° | 0.5° |
C02 | C25 | C24 | H25 | 180.0° | 179.8° |
C25 | C02 | C01 | H011 | 90.2° | 90.2° |
C25 | C02 | C01 | H012 | 29.8° | 29.7° |
C25 | C02 | C01 | H013 | 149.8° | 149.8° |
C25 | C02 | C03 | H03 | 179.6° | 179.8° |
C02 | C25 | C24 | H24 | 180.0° | 179.8° |
C03 | C04 | C05 | H04 | 180.0° | 180.0° |
C03 | C04 | C05 | O06 | 179.6° | 180.0° |
C03 | C04 | C05 | C24 | 0.8° | 0.0° |
C04 | C05 | O06 | C24 | 179.6° | 180.0° |
C04 | C05 | O06 | C07 | 49.7° | 180.0° |
C04 | C05 | C24 | C25 | 0.4° | 0.2° |
C05 | C04 | C03 | H03 | 179.2° | 180.0° |
C04 | C05 | C24 | H24 | 179.6° | 180.0° |
C05 | O06 | C07 | C08 | 105.0° | 180.0° |
O06 | C05 | C24 | C25 | 180.0° | 179.8° |
O06 | C05 | C04 | H04 | 0.4° | 0.0° |
O06 | C05 | C24 | H24 | 0.0° | 0.0° |
C05 | O06 | C07 | H071 | 15.9° | 60.0° |
C05 | O06 | C07 | H072 | 134.1° | 60.0° |
C24 | C05 | O06 | C07 | 130.7° | 0.0° |
C05 | C24 | C25 | H24 | 180.0° | 179.8° |
C05 | C24 | C25 | H25 | 179.9° | 179.7° |
C24 | C05 | C04 | H04 | 179.2° | 180.0° |
O06 | C07 | C08 | H071 | 121.0° | 120.0° |
O06 | C07 | C08 | H072 | 120.9° | 120.0° |
O06 | C07 | C08 | N09 | 115.0° | 180.0° |
O06 | C07 | H071 | H072 | 117.0° | 120.0° |
O06 | C07 | C08 | H081 | 123.4° | 60.0° |
O06 | C07 | C08 | H082 | 6.7° | 60.0° |
C07 | C08 | N09 | H081 | 121.6° | 120.0° |
C07 | C08 | N09 | H082 | 121.6° | 120.0° |
C07 | C08 | N09 | C10 | 149.7° | 90.0° |
C07 | C08 | N09 | C23 | 31.9° | 90.3° |
C08 | C07 | H071 | H072 | 117.0° | 120.0° |
C07 | C08 | H081 | H082 | 114.6° | 120.0° |
C08 | N09 | C10 | C23 | 178.7° | 179.8° |
C08 | N09 | C10 | S11 | 3.1° | 0.0° |
C08 | N09 | C10 | N17 | 179.0° | 180.0° |
C08 | N09 | C23 | C18 | 179.1° | 179.9° |
C08 | N09 | C23 | C22 | 0.5° | 0.7° |
N09 | C08 | C07 | H071 | 6.0° | 60.0° |
N09 | C08 | C07 | H072 | 124.1° | 60.0° |
N09 | C08 | H081 | H082 | 114.7° | 120.0° |
N09 | C10 | S11 | N17 | 177.7° | 180.0° |
N09 | C10 | S11 | C12 | 127.1° | 180.0° |
N09 | C10 | N17 | C18 | 0.1° | 0.0° |
C10 | N09 | C23 | C18 | 0.4° | 0.4° |
C10 | N09 | C23 | C22 | 179.2° | 179.5° |
C10 | N09 | C08 | H081 | 88.7° | 30.0° |
C10 | N09 | C08 | H082 | 28.1° | 150.0° |
C23 | N09 | C10 | S11 | 178.2° | 179.8° |
C23 | N09 | C10 | N17 | 0.3° | 0.3° |
N09 | C23 | C18 | N17 | 0.3° | 0.4° |
N09 | C23 | C18 | C19 | 180.0° | 179.8° |
N09 | C23 | C18 | C22 | 179.6° | 179.3° |
N09 | C23 | C22 | C21 | 180.0° | 179.6° |
C23 | N09 | C08 | H081 | 89.8° | 149.7° |
C23 | N09 | C08 | H082 | 153.5° | 29.7° |
N09 | C23 | C22 | H22 | 0.0° | 0.6° |
C10 | S11 | C12 | C13 | 162.7° | 180.0° |
S11 | C10 | N17 | C18 | 178.0° | 180.0° |
C10 | S11 | C12 | H121 | 41.1° | 60.0° |
C10 | S11 | C12 | H122 | 75.6° | 60.0° |
N17 | C10 | S11 | C12 | 50.6° | 0.1° |
C10 | N17 | C18 | C19 | 179.8° | 180.0° |
C10 | N17 | C18 | C23 | 0.2° | 0.2° |
S11 | C12 | C13 | H121 | 121.7° | 120.0° |
S11 | C12 | C13 | H122 | 121.7° | 120.0° |
S11 | C12 | C13 | C14 | 77.8° | 180.0° |
S11 | C12 | H121 | H122 | 114.5° | 120.0° |
S11 | C12 | C13 | H131 | 43.7° | 60.0° |
S11 | C12 | C13 | H132 | 160.6° | 60.0° |
C12 | C13 | C14 | H131 | 121.6° | 120.0° |
C12 | C13 | C14 | H132 | 121.6° | 120.0° |
C12 | C13 | C14 | O15 | 5.6° | 0.0° |
C12 | C13 | C14 | O16 | 175.4° | 180.0° |
C13 | C12 | H121 | H122 | 114.5° | 120.0° |
C12 | C13 | H131 | H132 | 114.9° | 120.0° |
C13 | C14 | O15 | O16 | 179.0° | 180.0° |
C14 | C13 | C12 | H121 | 160.5° | 60.0° |
C14 | C13 | C12 | H122 | 43.8° | 60.0° |
C14 | C13 | H131 | H132 | 114.9° | 120.0° |
C13 | C14 | O16 | H16 | 179.0° | 180.0° |
O15 | C14 | C13 | H131 | 116.0° | 120.0° |
O15 | C14 | C13 | H132 | 127.2° | 120.0° |
O15 | C14 | O16 | H16 | 0.0° | 0.0° |
O16 | C14 | C13 | H131 | 63.1° | 60.0° |
O16 | C14 | C13 | H132 | 53.8° | 60.0° |
N17 | C18 | C19 | C23 | 179.5° | 179.8° |
N17 | C18 | C19 | C20 | 179.9° | 180.0° |
N17 | C18 | C23 | C22 | 179.3° | 179.6° |
N17 | C18 | C19 | H19 | 0.1° | 0.0° |
C18 | C19 | C20 | H19 | 180.0° | 180.0° |
C18 | C19 | C20 | C21 | 0.9° | 0.0° |
C19 | C18 | C23 | C22 | 0.4° | 0.5° |
C18 | C19 | C20 | H20 | 179.1° | 179.9° |
C23 | C18 | C19 | C20 | 0.3° | 0.3° |
C18 | C23 | C22 | C21 | 0.5° | 0.5° |
C23 | C18 | C19 | H19 | 179.7° | 179.7° |
C18 | C23 | C22 | H22 | 179.5° | 179.7° |
C19 | C20 | C21 | H20 | 180.0° | 179.9° |
C19 | C20 | C21 | C22 | 0.7° | 0.0° |
C19 | C20 | C21 | H21 | 179.3° | 180.0° |
C20 | C21 | C22 | H21 | 180.0° | 180.0° |
C20 | C21 | C22 | C23 | 0.0° | 0.3° |
C21 | C20 | C19 | H19 | 179.1° | 180.0° |
C20 | C21 | C22 | H22 | 180.0° | 179.9° |
C21 | C22 | C23 | H22 | 180.0° | 179.8° |
C22 | C21 | C20 | H20 | 179.3° | 179.9° |
C23 | C22 | C21 | H21 | 180.0° | 179.7° |
H011 | C01 | H012 | H013 | 120.0° | 120.1° |
H03 | C03 | C04 | H04 | 0.8° | 0.0° |
H25 | C25 | C24 | H24 | 0.0° | 0.1° |
H071 | C07 | C08 | H081 | 115.7° | 180.0° |
H071 | C07 | C08 | H082 | 127.6° | 60.0° |
H072 | C07 | C08 | H081 | 2.4° | 60.0° |
H072 | C07 | C08 | H082 | 114.3° | 180.0° |
H121 | C12 | C13 | H131 | 78.0° | 180.0° |
H121 | C12 | C13 | H132 | 38.9° | 60.0° |
H122 | C12 | C13 | H131 | 165.4° | 60.0° |
H122 | C12 | C13 | H132 | 77.7° | 180.0° |
H19 | C19 | C20 | H20 | 0.9° | 0.1° |
H20 | C20 | C21 | H21 | 0.7° | 0.1° |
H21 | C21 | C22 | H22 | 0.0° | 0.1° |