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YKM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F29C28sing1.40Å1.37Å
O20C16doub1.21Å1.23Å
C28F30sing1.40Å1.38Å
C28C27sing1.53Å1.56Å
C28C31sing1.53Å1.55Å
C26C27sing1.53Å1.52Å
C26C25sing1.53Å1.52Å
C32C31sing1.53Å1.54Å
C32C25sing1.53Å1.55Å
C16N17sing1.34Å1.41Å
C16C15sing1.51Å1.52Å
N17C18sing1.47Å1.47Å
O24C04doub1.22Å1.23Å
C25C02sing1.53Å1.57Å
C02C01sing1.53Å1.55Å
C02O03sing1.45Å1.38Å
C15C14sing1.53Å1.54Å
C15C19sing1.55Å1.54Å
C04O03sing1.35Å1.37Å
C04N05sing1.35Å1.38Å
C18C19sing1.54Å1.53Å
C10C08sing1.53Å1.55Å
C14C13sing1.53Å1.57Å
N05C06sing1.46Å1.44Å
C06C11sing1.51Å1.53Å
C06C07sing1.53Å1.53Å
N12C13sing1.47Å1.48Å
N12C11sing1.35Å1.40Å
C13C21sing1.53Å1.54Å
C11O23doub1.21Å1.24Å
C08C07sing1.53Å1.56Å
C08C09sing1.53Å1.56Å
C21O22sing1.43Å1.42Å
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C02H4sing1.09Å1.10Å
C06H5sing1.09Å1.10Å
C07H6sing1.09Å1.10Å
C07H7sing1.09Å1.10Å
C08H8sing1.09Å1.10Å
C09H9sing1.09Å1.10Å
C09H10sing1.09Å1.10Å
C09H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
C10H13sing1.09Å1.10Å
C10H14sing1.09Å1.10Å
C13H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
C14H17sing1.09Å1.10Å
C15H18sing1.09Å1.10Å
C18H19sing1.09Å1.10Å
C18H20sing1.09Å1.10Å
C19H21sing1.09Å1.10Å
C19H22sing1.09Å1.10Å
C21S1sing1.81Å1.07Å
C21H24sing1.09Å1.10Å
C25H25sing1.09Å1.10Å
C26H26sing1.09Å1.10Å
C26H27sing1.09Å1.10Å
C27H28sing1.09Å1.10Å
C27H29sing1.09Å1.10Å
C31H30sing1.09Å1.10Å
C31H31sing1.09Å1.10Å
C32H32sing1.09Å1.10Å
C32H33sing1.09Å1.10Å
N05H34sing0.97Å1.00Å
N12H35sing0.97Å1.00Å
N17H36sing0.97Å1.00Å
O22H37sing0.97Å0.95Å
S1O1doub1.42Å34.23Å
S1O2doub1.42Å34.23Å
S1O3sing1.52Å34.23Å
O3H23sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F29C28F3098.2°109.5°
F29C28C27109.4°109.5°
F29C28C31109.8°109.4°
O20C16N17123.7°124.9°
O20C16C15126.4°125.0°
F30C28C27112.5°109.5°
F30C28C31112.0°109.5°
C27C28C31113.8°109.4°
C28C27C26111.2°109.4°
C28C27H28109.0°109.4°
C28C27H29109.1°109.5°
C28C31C32111.5°109.5°
C28C31H30109.0°109.5°
C28C31H31109.0°109.4°
C27C26C25110.0°109.5°
C27C26H26109.3°109.5°
C27C26H27109.4°109.5°
C26C27H28109.0°109.5°
C26C27H29109.0°109.5°
C26C25C32108.2°109.5°
C26C25C02112.5°109.5°
C26C25H25109.0°109.5°
C25C26H26109.4°109.5°
C25C26H27109.3°109.5°
C31C32C25111.4°109.5°
C32C31H30109.0°109.5°
C32C31H31109.0°109.5°
C31C32H32109.0°109.5°
C31C32H33109.0°109.5°
C32C25C02109.8°109.5°
C32C25H25108.7°109.5°
C25C32H32109.0°109.5°
C25C32H33109.0°109.5°
N17C16C15109.9°110.1°
C16N17C18111.2°111.3°
C16N17H36124.4°124.4°
C16C15C14111.6°110.5°
C16C15C19103.6°104.2°
C16C15H18110.3°110.6°
N17C18C19105.3°105.4°
N17C18H19110.5°110.2°
N17C18H20110.5°110.3°
C18N17H36124.4°124.3°
O24C04O03120.2°120.0°
O24C04N05122.7°120.0°
C25C02C01113.0°109.5°
C25C02O03106.1°109.5°
C25C02H4109.5°109.5°
C02C25H25108.5°109.4°
C01C02O03106.3°109.5°
C02C01H1109.5°109.5°
C02C01H2109.5°109.5°
C02C01H3109.5°109.5°
C01C02H4109.8°109.5°
C02O03C04119.6°117.0°
O03C02H4112.2°109.5°
C14C15C19110.9°110.5°
C15C14C13113.7°109.5°
C15C14H16108.4°109.4°
C15C14H17108.4°109.5°
C14C15H18110.2°110.5°
C15C19C18106.6°101.8°
C19C15H18110.1°110.5°
C15C19H21110.2°111.0°
C15C19H22110.2°111.0°
O03C04N05117.1°120.0°
C04N05C06119.7°120.0°
C04N05H34120.1°120.0°
C19C18H19110.5°110.2°
C19C18H20110.5°110.3°
C18C19H21110.2°111.0°
C18C19H22110.2°110.9°
C10C08C07112.0°109.4°
C10C08C09110.4°109.5°
C10C08H8107.5°109.5°
C08C10H12109.5°109.5°
C08C10H13109.5°109.4°
C08C10H14109.5°109.5°
C14C13N12109.6°109.5°
C14C13C21109.5°109.5°
C14C13H15108.7°109.5°
C13C14H16108.4°109.5°
C13C14H17108.4°109.5°
N05C06C11109.4°109.5°
N05C06C07108.7°109.5°
N05C06H5110.0°109.5°
C06N05H34120.2°120.0°
C11C06C07111.1°109.5°
C06C11N12119.4°120.0°
C06C11O23119.6°120.0°
C11C06H5108.8°109.4°
C06C07C08112.5°109.5°
C07C06H5108.7°109.4°
C06C07H6108.7°109.5°
C06C07H7108.7°109.5°
C13N12C11123.7°120.0°
N12C13C21110.2°109.5°
N12C13H15109.8°109.4°
C13N12H35118.1°120.0°
N12C11O23121.0°120.0°
C11N12H35118.2°120.0°
C13C21O22107.8°109.5°
C21C13H15109.0°109.5°
C13C21S1110.5°109.5°
C13C21H24106.2°109.5°
C07C08C09112.0°109.5°
C08C07H6108.7°109.5°
C08C07H7108.7°109.5°
C07C08H8107.3°109.5°
C09C08H8107.4°109.5°
C08C09H9109.5°109.5°
C08C09H10109.5°109.4°
C08C09H11109.4°109.5°
O22C21S1110.6°109.5°
O22C21H24107.7°109.4°
C21O22H37109.5°114.0°
H1C01H2109.4°109.4°
H1C01H3109.4°109.5°
H2C01H3109.5°109.5°
H6C07H7109.5°109.5°
H9C09H10109.4°109.5°
H9C09H11109.5°109.4°
H10C09H11109.5°109.4°
H12C10H13109.5°109.4°
H12C10H14109.5°109.5°
H13C10H14109.5°109.5°
H16C14H17109.5°109.5°
H19C18H20109.5°110.3°
H21C19H22109.5°110.9°
S1C21H24113.7°109.4°
C21S1O1136.2°110.5°
C21S1O2136.2°110.5°
C21S1O3136.2°104.5°
H26C26H27109.4°109.4°
H28C27H29109.5°109.5°
H30C31H31109.4°109.4°
H32C32H33109.5°109.5°
O1S1O20.0°121.1°
O1S1O30.0°104.3°
O2S1O30.0°104.2°
S1O3H2390.0°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F29C28F30C27115.0°120.0°
F29C28F30C31115.3°120.0°
F29C28C27C31123.2°119.9°
F29C28C27C2674.2°60.0°
F29C28C31C3277.0°60.0°
F29C28C27H28165.5°60.0°
F29C28C27H2946.0°180.0°
F29C28C31H3043.3°60.1°
F29C28C31H31162.7°180.0°
O20C16N17C15178.4°180.0°
O20C16N17C18178.7°179.6°
O20C16C15C1450.8°45.1°
O20C16C15C19170.1°163.8°
O20C16C15H1872.1°77.5°
O20C16N17H361.3°0.5°
F30C28C27C31128.8°120.0°
F30C28C27C26177.8°180.0°
F30C28C31C32175.0°180.0°
F30C28C27H2857.5°60.0°
F30C28C27H2962.0°60.0°
F30C28C31H3064.7°60.0°
F30C28C31H3154.7°60.0°
C28C27C26H28120.3°119.9°
C28C27C26H29120.3°120.0°
C28C27C26C2558.1°60.0°
C27C28C31C3246.0°60.0°
C28C27C26H26178.2°60.0°
C28C27C26H2762.0°179.9°
C28C27H28H29119.2°120.0°
C27C28C31H30166.3°179.9°
C27C28C31H3174.3°60.0°
C31C28C27C2649.0°60.0°
C28C31C32H30120.3°120.0°
C28C31C32H31120.3°120.0°
C28C31C32C2552.5°60.0°
C31C28C27H2871.3°180.0°
C31C28C27H29169.2°60.0°
C28C31H30H31119.1°120.0°
C28C31C32H3267.8°180.0°
C28C31C32H33172.8°60.0°
C27C26C25H26120.1°120.0°
C27C26C25H27120.1°120.0°
C27C26C25C3264.3°60.0°
C27C26C25C02174.3°180.0°
C27C26C25H2553.8°60.0°
C27C26H26H27119.8°120.0°
C26C27H28H29119.2°120.1°
C26C25C32C3161.8°60.0°
C26C25C32C02123.1°120.0°
C26C25C32H25118.3°120.0°
C26C25C02H25120.8°120.0°
C26C25C02C0160.4°175.0°
C26C25C02O03176.5°65.0°
C26C25C02H462.3°55.0°
C25C26H26H27119.7°120.0°
C25C26C27H2862.2°180.0°
C25C26C27H29178.4°60.0°
C26C25C32H3258.6°180.0°
C26C25C32H33178.0°60.0°
C31C32C25H32120.3°120.0°
C31C32C25H33120.3°120.0°
C31C32C25C02175.2°180.0°
C31C32C25H2556.5°60.1°
C32C31H30H31119.1°120.0°
C31C32H32H33119.1°120.0°
C32C25C02H25118.7°120.0°
C32C25C02C01179.1°65.0°
C32C25C02O0363.0°55.0°
C32C25C02H458.2°175.0°
C32C25C26H26175.6°60.0°
C32C25C26H2755.8°180.0°
C25C32C31H30172.8°180.0°
C25C32C31H3167.8°60.0°
C25C32H32H33119.1°120.0°
C16N17C18H36180.0°180.0°
N17C16C15C14130.9°134.9°
N17C16C15C1911.5°16.3°
C16N17C18C1911.3°17.0°
N17C16C15H18106.3°102.5°
C16N17C18H19108.0°136.0°
C16N17C18H20130.7°102.0°
C15C16N17C180.3°0.4°
C16C15C14C19114.9°114.8°
C16C15C14H18123.0°122.7°
C16C15C19H18118.0°118.8°
C16C15C19C1818.0°24.8°
C16C15C14C13179.0°179.9°
C16C15C14H1660.3°59.9°
C16C15C14H1758.4°60.1°
C16C15C19H21101.5°93.3°
C16C15C19H22137.6°142.9°
C15C16N17H36179.7°179.6°
N17C18C19C1518.2°25.4°
N17C18C19H19119.3°118.9°
N17C18C19H20119.3°119.1°
N17C18H19H20122.0°122.0°
N17C18C19H21101.4°92.7°
N17C18C19H22137.7°143.5°
O24C04O03C024.7°0.0°
O24C04O03N05179.8°179.9°
O24C04N05C0615.5°0.1°
O24C04N05H34164.4°180.0°
C25C02C01O03116.0°120.0°
C25C02C01H4122.5°120.0°
C25C02O03H4119.5°120.0°
C25C02O03C04162.8°150.0°
C25C02C01H1180.0°60.0°
C25C02C01H260.0°180.0°
C25C02C01H360.0°60.0°
C02C25C26H2654.2°60.0°
C02C25C26H2765.6°59.9°
C02C25C32H3264.5°60.0°
C02C25C32H3354.9°60.0°
C01C02O03H4120.0°120.0°
C01C02O03C0476.7°90.0°
C02C01H1H2120.0°120.0°
C02C01H1H3120.0°120.0°
C02C01H2H3120.0°120.0°
C01C02C25H2560.4°55.0°
C02O03C04N05175.1°180.0°
O03C02C01H164.0°180.0°
O03C02C01H256.0°60.0°
O03C02C01H3176.0°60.0°
O03C02C25H2555.7°175.0°
C14C15C19H18122.1°122.5°
C14C15C19C18137.9°143.5°
C15C14C13H16120.6°120.0°
C15C14C13H17120.6°120.0°
C15C14C13N1265.0°63.7°
C15C14C13C21174.0°176.3°
C15C14C13H1555.0°56.2°
C15C14H16H17118.1°120.0°
C14C15C19H2118.4°25.4°
C14C15C19H22102.6°98.4°
C15C19C18H21119.5°118.1°
C15C19C18H22119.6°118.1°
C19C15C14C1366.0°65.4°
C19C15C14H1654.6°174.6°
C19C15C14H17173.3°54.7°
C15C19C18H19101.2°144.4°
C15C19C18H20137.5°93.6°
C15C19H21H22121.4°123.8°
O03C04N05C06164.3°180.0°
C04O03C02H443.3°30.0°
O03C04N05H3415.7°0.1°
C04N05C06H34180.0°179.9°
C04N05C06C1159.1°154.9°
C04N05C06C07179.3°85.0°
C04N05C06H560.4°34.9°
C18C19C15H18100.0°94.0°
C19C18H19H20121.9°122.0°
C18C19H21H22121.3°123.8°
C19C18N17H36168.7°163.0°
C10C08C07C0653.8°65.0°
C10C08C07C09124.7°120.0°
C10C08C07H8117.8°120.0°
C10C08C09H8116.9°120.0°
C10C08C07H6174.3°175.0°
C10C08C07H766.6°55.0°
C10C08C09H9180.0°60.0°
C10C08C09H1060.0°60.1°
C10C08C09H1160.0°180.0°
C08C10H12H13120.0°119.9°
C08C10H12H14120.0°120.0°
C08C10H13H14120.0°120.0°
C14C13N12C21120.6°120.0°
C14C13N12H15119.3°120.0°
C14C13N12C11107.3°148.4°
C14C13C21H15118.8°120.0°
C14C13C21O22174.2°175.0°
C13C14H16H17118.1°120.0°
C13C14C15H1856.1°57.1°
C14C13C21S164.8°65.0°
C14C13C21H2459.0°55.0°
C14C13N12H3572.7°31.5°
N05C06C11C07120.1°120.1°
N05C06C11H5120.2°120.0°
N05C06C07H5119.8°120.0°
N05C06C11N12145.0°180.0°
N05C06C11O2334.0°0.1°
N05C06C07C0857.7°65.0°
N05C06C07H662.7°55.0°
N05C06C07H7178.2°175.0°
C11C06C07H5119.7°119.9°
C06C11N12C13178.5°180.0°
C06C11N12O23179.0°179.9°
C11C06C07C08178.2°175.0°
C11C06C07H657.8°65.1°
C11C06C07H761.3°55.0°
C11C06N05H34120.9°25.0°
C06C11N12H351.5°0.1°
C07C06C11N1294.9°59.9°
C07C06C11O2386.1°120.0°
C06C07C08H6120.5°120.0°
C06C07C08H7120.4°120.0°
C06C07C08C09178.5°175.0°
C06C07H6H7118.6°120.0°
C06C07C08H863.9°55.0°
C07C06N05H340.7°95.1°
C13N12C11H35180.0°179.9°
N12C13C21H15120.6°120.0°
C13N12C11O230.5°0.0°
N12C13C21O2265.2°65.0°
N12C13C14H16174.4°56.2°
N12C13C14H1755.6°176.3°
N12C13C21S155.8°55.0°
N12C13C21H24179.6°175.0°
C11N12C13C21132.1°91.6°
N12C11C06H524.8°60.0°
C11N12C13H1512.0°28.5°
C13C21O22S1121.0°120.0°
C13C21O22H24114.2°120.1°
C21C13C14H1653.4°63.8°
C21C13C14H1765.4°56.3°
C13C21S1H24119.3°120.1°
C21C13N12H3547.9°88.5°
C13C21O22H37180.0°60.0°
C13C21S1O183.1°68.4°
C13C21S1O283.1°68.4°
C13C21S1O383.1°180.0°
O23C11C06H5154.2°120.0°
O23C11N12H35179.5°180.0°
C07C08C09H8117.5°120.0°
C08C07C06H562.0°55.0°
C08C07H6H7118.6°120.0°
C07C08C09H954.4°59.9°
C07C08C09H1065.5°180.0°
C07C08C09H11174.4°60.0°
C07C08C10H12180.0°60.0°
C07C08C10H1360.0°179.9°
C07C08C10H1460.0°60.0°
C09C08C07H661.0°55.0°
C09C08C07H758.1°65.0°
C08C09H9H10120.0°120.0°
C08C09H9H11120.0°120.0°
C08C09H10H11120.0°120.0°
C09C08C10H1254.5°180.0°
C09C08C10H1365.5°60.1°
C09C08C10H14174.5°60.0°
O22C21C13H1555.4°55.0°
O22C21S1H24121.3°119.9°
O22C21S1O1157.5°171.6°
O22C21S1O2157.5°51.6°
O22C21S1O3157.5°60.0°
H1C01H2H3119.9°120.0°
H1C01C02H457.5°60.0°
H2C01C02H4177.5°60.0°
H3C01C02H462.5°180.0°
H4C02C25H25177.0°65.0°
H5C06C07H6177.5°175.0°
H5C06C07H758.4°65.0°
H5C06N05H34119.6°145.0°
H6C07C08H856.5°65.0°
H7C07C08H8175.6°175.0°
H8C08C09H963.1°180.0°
H8C08C09H10176.9°60.0°
H8C08C09H1156.9°60.0°
H8C08C10H1262.4°59.9°
H8C08C10H13177.6°60.0°
H8C08C10H1457.7°180.0°
H9C09H10H11120.0°120.0°
H12C10H13H14120.0°120.0°
H15C13C14H1665.6°176.2°
H15C13C14H17175.6°63.8°
H15C13C21S1176.4°175.0°
H15C13C21H2459.8°65.0°
H15C13N12H35168.0°151.5°
H16C14C15H18176.7°62.9°
H17C14C15H1864.6°177.2°
H18C15C19H21140.5°147.9°
H18C15C19H2219.6°24.1°
H19C18C19H21139.3°26.2°
H19C18C19H2218.4°97.5°
H19C18N17H3672.0°44.0°
H20C18C19H2118.0°148.3°
H20C18C19H22102.9°24.5°
H20C18N17H3649.4°78.0°
S1C21O22H3759.0°60.0°
C21S1O1O290.0°131.5°
C21S1O1O390.0°111.7°
C21S1O2O390.0°111.7°
C21S1O3H2390.0°180.0°
H24C21O22H3765.8°179.9°
H24C21S1O136.2°51.7°
H24C21S1O236.2°171.6°
H24C21S1O336.2°60.0°
H25C25C26H2666.3°180.0°
H25C25C26H27173.9°60.0°
H25C25C32H32176.9°59.9°
H25C25C32H3363.7°180.0°
H26C26C27H2858.0°59.9°
H26C26C27H2961.5°180.0°
H27C26C27H28177.8°60.0°
H27C26C27H2958.3°60.1°
H30C31C32H3252.5°60.0°
H30C31C32H3366.9°60.0°
H31C31C32H32171.9°60.0°
H31C31C32H3352.5°180.0°
O1S1O2O390.0°116.8°
O1S1O3H2390.0°63.9°
O2S1O3H2390.0°64.0°

222415

PDB entries from 2024-07-10

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