Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YKF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C17C16doub1.38Å1.37ÅAromatic
C17C18sing1.38Å1.37ÅAromatic
C16C15sing1.38Å1.38ÅAromatic
C18C19doub1.38Å1.39ÅAromatic
C15C14doub1.39Å1.38ÅAromatic
C19C14sing1.39Å1.39ÅAromatic
C14O5sing1.36Å1.42Å
C1O1sing1.45Å1.44Å
O3C3doub1.21Å1.22Å
O1C2sing1.35Å1.34Å
C3N2sing1.35Å1.37Å
C5C6doub1.38Å1.37ÅAromatic
C5C4sing1.39Å1.38ÅAromatic
O5C13sing1.36Å1.39Å
C6C7sing1.39Å1.39ÅAromatic
N2C4sing1.40Å1.41Å
N2N1sing1.40Å1.39Å
C2O2doub1.21Å1.21Å
C2N1sing1.35Å1.37Å
C4C23doub1.39Å1.38ÅAromatic
C20C13doub1.39Å1.38ÅAromatic
C20C9sing1.40Å1.38ÅAromatic
C13C12sing1.39Å1.38ÅAromatic
C7N3sing1.40Å1.43Å
C7C21doub1.39Å1.39ÅAromatic
C8O4doub1.22Å1.24Å
C8C9sing1.48Å1.49Å
C8N3sing1.35Å1.35Å
C9C10doub1.40Å1.39ÅAromatic
C23C21sing1.38Å1.37ÅAromatic
C12C11doub1.38Å1.38ÅAromatic
C21C22sing1.51Å1.51Å
C10C11sing1.38Å1.38ÅAromatic
C1H3sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C10H9sing1.08Å1.08Å
C11H10sing1.08Å1.08Å
C12H11sing1.08Å1.08Å
C15H12sing1.08Å1.08Å
C16H13sing1.08Å1.08Å
C17H14sing1.08Å1.08Å
C18H15sing1.08Å1.08Å
C19H16sing1.08Å1.08Å
C20H17sing1.08Å1.08Å
C22H19sing1.09Å1.10Å
C22H20sing1.09Å1.10Å
C22H18sing1.09Å1.10Å
C23H21sing1.08Å1.08Å
C3H5sing1.08Å1.08Å
C5H6sing1.08Å1.08Å
C6H7sing1.08Å1.08Å
N1H4sing0.97Å1.00Å
N3H8sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16C17C18119.9°120.1°
C17C16C15120.7°120.1°
C17C16H13119.7°120.0°
C16C17H14120.1°119.9°
C17C18C19120.4°120.0°
C18C17H14120.1°120.0°
C17C18H15119.8°120.0°
C16C15C14119.3°119.9°
C16C15H12120.3°120.0°
C15C16H13119.7°120.0°
C18C19C14119.1°120.0°
C19C18H15119.8°120.0°
C18C19H16120.5°120.0°
C15C14C19120.4°119.9°
C15C14O5118.5°120.1°
C14C15H12120.4°120.1°
C19C14O5120.8°120.1°
C14C19H16120.5°120.0°
C14O5C13115.5°118.0°
C1O1C2116.1°117.0°
O1C1H3109.5°109.4°
O1C1H2109.5°109.5°
O1C1H1109.5°109.5°
O3C3N2127.9°120.0°
O3C3H5116.1°120.0°
O1C2O2125.1°120.0°
O1C2N1109.1°120.0°
C3N2C4123.5°120.0°
C3N2N1118.4°120.0°
N2C3H5116.1°120.0°
C6C5C4119.1°120.0°
C5C6C7120.2°120.0°
C6C5H6120.4°120.0°
C5C6H7119.9°120.0°
C5C4N2120.9°120.0°
C5C4C23120.1°120.0°
C4C5H6120.4°120.0°
O5C13C20117.3°120.0°
O5C13C12121.6°120.0°
C6C7N3119.8°120.0°
C6C7C21120.7°120.0°
C7C6H7119.9°120.0°
C4N2N1117.7°120.0°
N2C4C23118.6°120.0°
N2N1C2118.4°120.0°
N2N1H4120.8°120.0°
O2C2N1125.8°120.0°
C2N1H4120.8°120.0°
C4C23C21121.1°120.0°
C4C23H21119.4°120.0°
C13C20C9120.2°119.8°
C20C13C12120.8°120.0°
C13C20H17119.9°120.1°
C20C9C8116.4°120.1°
C20C9C10119.1°119.7°
C9C20H17119.9°120.1°
C13C12C11119.0°120.2°
C13C12H11120.5°119.9°
N3C7C21119.4°120.0°
C7N3C8127.8°119.9°
C7N3H8116.1°120.0°
C7C21C23118.4°120.0°
C7C21C22121.7°119.9°
O4C8C9118.8°120.0°
O4C8N3122.5°120.0°
C9C8N3115.4°120.0°
C8C9C10124.5°120.1°
C8N3H8116.1°120.0°
C9C10C11120.0°120.0°
C9C10H9120.0°120.0°
C23C21C22119.9°120.0°
C21C23H21119.5°120.0°
C12C11C10120.6°120.3°
C12C11H10119.7°119.9°
C11C12H11120.5°119.9°
C21C22H19109.5°109.5°
C21C22H20109.5°109.5°
C21C22H18109.4°109.5°
C11C10H9120.0°120.1°
C10C11H10119.7°119.9°
H3C1H2109.5°109.5°
H3C1H1109.4°109.5°
H2C1H1109.5°109.5°
H19C22H20109.5°109.5°
H19C22H18109.5°109.4°
H20C22H18109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16C17C18H14180.0°179.9°
C17C16C15H13180.0°180.0°
C16C17C18C190.7°0.3°
C17C16C15C144.1°0.1°
C17C16C15H12176.0°180.0°
C16C17C18H15179.2°179.9°
C18C17C16C151.3°0.1°
C17C18C19H15180.0°179.8°
C17C18C19C143.0°0.5°
C18C17C16H13178.7°180.0°
C17C18C19H16177.0°180.0°
C16C15C14H12180.0°180.0°
C16C15C14C196.3°0.3°
C16C15C14O5179.1°180.0°
C15C16C17H14178.7°180.0°
C18C19C14C155.8°0.5°
C18C19C14H16180.0°179.5°
C18C19C14O5178.4°179.8°
C19C18C17H14179.3°179.8°
C15C14C19O5172.7°179.7°
C15C14O5C13162.4°174.7°
C14C15C16H13175.9°180.0°
C15C14C19H16174.2°180.0°
C19C14O5C1324.9°5.1°
C19C14C15H12173.7°179.8°
C14C19C18H15177.0°179.7°
C14O5C13C2053.7°73.5°
C14O5C13C12132.6°106.5°
O5C14C15H120.9°0.0°
O5C14C19H161.6°0.3°
C1O1C2O20.6°0.0°
C1O1C2N1178.5°179.9°
O1C1H3H2120.0°120.0°
O1C1H3H1120.0°120.0°
O1C1H2H1120.0°120.0°
O3C3N2H5180.0°180.0°
O3C3N2C46.5°4.8°
O3C3N2N1178.8°175.2°
O1C2N1N27.3°0.1°
O1C2O2N1179.0°179.9°
C2O1C1H3180.0°180.0°
C2O1C1H260.0°60.0°
C2O1C1H160.0°60.0°
O1C2N1H4172.7°180.0°
C3N2C4C526.6°49.5°
C3N2C4N1172.3°180.0°
C3N2N1C2115.7°74.9°
C3N2C4C23146.5°130.6°
C3N2N1H464.4°105.0°
C6C5C4H6180.0°179.9°
C5C6C7H7180.0°179.8°
C6C5C4N2177.9°180.0°
C6C5C4C235.0°0.1°
C5C6C7N3180.0°180.0°
C5C6C7C213.0°0.4°
C4C5C6C70.3°0.2°
C5C4N2C23173.0°180.0°
C5C4N2N1161.2°130.5°
C5C4C23C216.5°0.1°
C5C4C23H21173.5°179.9°
C4C5C6H7179.6°180.0°
O5C13C20C12173.8°180.0°
O5C13C20C9179.1°179.8°
O5C13C12C11179.0°180.0°
O5C13C12H110.9°0.1°
O5C13C20H171.0°0.0°
C6C7N3C21177.0°179.6°
C6C7N3C827.8°30.0°
C6C7C21C231.6°0.4°
C6C7C21C22178.3°179.8°
C7C6C5H6179.7°180.0°
C6C7N3H8152.2°149.9°
C4N2N1C271.6°105.0°
N2C4C23C21179.6°180.0°
N2C4C23H210.4°0.0°
C4N2C3H5173.5°175.2°
N2C4C5H62.1°0.2°
C4N2N1H4108.3°75.0°
N2N1C2O2171.8°180.0°
N2N1C2H4180.0°179.9°
N1N2C4C2325.8°49.5°
N1N2C3H51.3°4.8°
O2C2N1H48.2°0.1°
C4C23C21C73.1°0.2°
C4C23C21H21180.0°180.0°
C4C23C21C22176.9°180.0°
C23C4C5H6175.0°179.8°
C13C20C9H17180.0°179.8°
C13C20C9C8177.8°180.0°
C13C20C9C100.4°0.6°
C20C13C12C117.5°0.0°
C20C13C12H11172.5°180.0°
C9C20C13C125.3°0.3°
C20C9C8O463.5°0.0°
C20C9C8C10177.2°179.4°
C20C9C8N3136.3°180.0°
C20C9C10C113.7°0.6°
C20C9C10H9176.3°179.7°
C13C12C11H11180.0°180.0°
C13C12C11C104.0°0.0°
C13C12C11H10176.0°180.0°
C12C13C20H17174.7°180.0°
C7N3C8O4156.9°4.2°
C7N3C8C943.8°175.7°
C7N3C8H8180.0°179.9°
N3C7C21C23178.6°180.0°
N3C7C21C221.4°0.2°
N3C7C6H70.1°0.2°
C21C7N3C8149.2°149.5°
C7C21C23C22179.9°179.8°
C7C21C22H1990.0°90.2°
C7C21C22H20150.0°29.8°
C7C21C22H1830.1°149.8°
C7C21C23H21176.9°179.8°
C21C7C6H7177.0°179.8°
C21C7N3H830.8°30.5°
O4C8C9N3160.1°180.0°
O4C8C9C10119.2°179.4°
O4C8N3H823.1°175.7°
C8C9C10C11179.1°180.0°
C8C9C10H90.9°0.3°
C8C9C20H172.2°0.3°
C9C8N3H8136.2°4.3°
N3C8C9C1040.9°0.6°
C9C10C11C121.5°0.4°
C9C10C11H9180.0°179.7°
C9C10C11H10178.5°179.7°
C10C9C20H17179.6°179.6°
C23C21C22H1989.9°90.0°
C23C21C22H2030.1°150.0°
C23C21C22H18150.0°30.0°
C12C11C10H10180.0°179.9°
C12C11C10H9178.5°180.0°
C21C22H19H20120.0°120.0°
C21C22H19H18120.0°119.9°
C21C22H20H18120.0°120.0°
C22C21C23H213.1°0.0°
C10C11C12H11176.0°180.0°
H3C1H2H1120.0°120.0°
H9C10C11H101.5°0.0°
H10C11C12H114.0°0.0°
H12C15C16H134.0°0.0°
H13C16C17H141.3°0.0°
H14C17C18H150.8°0.0°
H15C18C19H163.0°0.2°
H19C22H20H18120.0°120.0°
H6C5C6H70.4°0.2°

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon