Obsolete: YJM

YJM was replaced with SGN on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5	C1	sing	1.43Å	1.38Å
C2	C1	sing	1.53Å	1.49Å
C1	O1	sing	1.43Å	1.38Å
C1	H1	sing	1.09Å	1.10Å
C3	C2	sing	1.53Å	1.49Å
C2	N2	sing	1.47Å	1.44Å
C2	H2	sing	1.09Å	1.10Å
C4	C3	sing	1.53Å	1.48Å
C3	O3	sing	1.43Å	1.38Å
C3	H3	sing	1.09Å	1.10Å
O4	C4	sing	1.43Å	1.36Å
C4	C5	sing	1.53Å	1.57Å
C4	H4	sing	1.09Å	1.10Å
C6	C5	sing	1.53Å	1.59Å
C5	O5	sing	1.43Å	1.47Å
C5	H5	sing	1.09Å	1.10Å
C6	O6	sing	1.43Å	1.38Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
N2	S12	sing	1.66Å	1.63Å
N2	HN21	sing	0.97Å	1.00Å
O3	HO3	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å
S16	O6	sing	1.52Å	1.47Å
O13	S12	doub	1.42Å	1.44Å
O14	S12	doub	1.42Å	1.44Å
S12	O15	sing	1.52Å	1.47Å
O15	HO15	sing	0.97Å	0.95Å
O19	S16	doub	1.42Å	1.47Å
S16	O17	doub	1.42Å	1.44Å
S16	O18	sing	1.52Å	1.44Å
O18	HO18	sing	0.97Å	0.95Å
O1	HO1	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O5	C1	C2	109.0°	109.5°
O5	C1	O1	109.9°	109.5°
O5	C1	H1	110.0°	109.5°
C1	O5	C5	117.1°	114.1°
C2	C1	O1	109.6°	109.5°
C2	C1	H1	108.4°	109.5°
C1	C2	C3	109.2°	109.1°
C1	C2	N2	109.8°	109.5°
C1	C2	H2	109.2°	109.5°
O1	C1	H1	110.0°	109.5°
C1	O1	HO1	109.5°	114.0°
C3	C2	N2	109.6°	109.5°
C3	C2	H2	109.1°	109.6°
C2	C3	C4	109.7°	109.0°
C2	C3	O3	109.5°	109.5°
C2	C3	H3	107.2°	109.6°
N2	C2	H2	109.9°	109.6°
C2	N2	S12	110.4°	120.0°
C2	N2	HN21	109.2°	120.0°
C4	C3	O3	114.1°	109.5°
C4	C3	H3	107.3°	109.6°
C3	C4	O4	113.3°	109.5°
C3	C4	C5	107.6°	109.1°
C3	C4	H4	109.3°	109.6°
O3	C3	H3	108.7°	109.6°
C3	O3	HO3	109.5°	114.0°
O4	C4	C5	107.1°	109.5°
O4	C4	H4	111.1°	109.5°
C4	O4	HO4	109.5°	114.0°
C5	C4	H4	108.1°	109.6°
C4	C5	C6	114.1°	109.4°
C4	C5	O5	113.3°	109.4°
C4	C5	H5	103.9°	109.5°
C6	C5	O5	115.2°	109.5°
C6	C5	H5	103.8°	109.5°
C5	C6	O6	107.8°	109.4°
C5	C6	H61	109.9°	109.5°
C5	C6	H62	109.9°	109.5°
O5	C5	H5	104.8°	109.5°
O6	C6	H61	109.9°	109.5°
O6	C6	H62	109.9°	109.5°
C6	O6	S16	120.6°	114.0°
H61	C6	H62	109.5°	109.6°
S12	N2	HN21	109.2°	120.0°
N2	S12	O13	109.9°	106.4°
N2	S12	O14	109.1°	106.4°
N2	S12	O15	109.4°	107.2°
O6	S16	O19	109.5°	106.4°
O6	S16	O17	108.0°	106.4°
O6	S16	O18	109.6°	107.3°
O13	S12	O14	109.0°	123.1°
O13	S12	O15	109.3°	106.4°
O14	S12	O15	110.3°	106.4°
S12	O15	HO15	109.5°	114.0°
O19	S16	O17	109.7°	123.2°
O19	S16	O18	109.9°	106.4°
O17	S16	O18	110.1°	106.4°
S16	O18	HO18	109.5°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5	C1	C2	O1	120.3°	120.0°
O5	C1	C2	H1	119.7°	120.0°
O5	C1	O1	H1	121.2°	120.0°
O5	C1	C2	C3	62.8°	57.6°
O5	C1	C2	N2	177.0°	177.5°
O5	C1	C2	H2	56.4°	62.3°
C1	O5	C5	C4	46.3°	61.2°
C1	O5	C5	C6	179.7°	178.9°
C1	O5	C5	H5	66.3°	58.8°
O5	C1	O1	HO1	180.0°	60.0°
C2	C1	O1	H1	119.1°	120.0°
C1	C2	C3	N2	120.3°	119.9°
C1	C2	C3	H2	119.3°	119.9°
C1	C2	N2	H2	120.1°	120.1°
C1	C2	C3	C4	66.7°	57.0°
C1	C2	C3	O3	167.4°	176.8°
C1	C2	C3	H3	49.6°	63.0°
C2	C1	O5	C5	53.7°	61.2°
C1	C2	N2	S12	111.4°	95.0°
C1	C2	N2	HN21	128.5°	85.0°
C2	C1	O1	HO1	60.3°	180.0°
O1	C1	C2	C3	57.4°	62.4°
O1	C1	C2	N2	62.7°	57.5°
O1	C1	C2	H2	176.7°	177.7°
O1	C1	O5	C5	66.4°	58.8°
H1	C1	C2	C3	177.5°	177.6°
H1	C1	C2	N2	57.3°	62.5°
H1	C1	C2	H2	63.3°	57.7°
H1	C1	O5	C5	172.4°	178.8°
H1	C1	O1	HO1	58.8°	60.0°
C3	C2	N2	H2	119.9°	120.2°
C2	C3	C4	O3	123.3°	119.8°
C2	C3	C4	H3	116.2°	119.9°
C2	C3	O3	H3	116.8°	120.2°
C2	C3	C4	O4	174.1°	176.9°
C2	C3	C4	C5	55.9°	57.0°
C2	C3	C4	H4	61.3°	62.9°
C3	C2	N2	S12	128.7°	145.3°
C3	C2	N2	HN21	8.6°	34.7°
C2	C3	O3	HO3	180.0°	180.0°
N2	C2	C3	C4	173.0°	176.9°
N2	C2	C3	O3	47.0°	63.3°
N2	C2	C3	H3	70.8°	56.9°
C2	N2	S12	HN21	120.1°	180.0°
C2	N2	S12	O13	65.3°	178.5°
C2	N2	S12	O14	54.1°	48.6°
C2	N2	S12	O15	174.8°	65.0°
H2	C2	C3	C4	52.6°	62.9°
H2	C2	C3	O3	73.4°	56.9°
H2	C2	C3	H3	168.9°	177.1°
H2	C2	N2	S12	8.8°	25.1°
H2	C2	N2	HN21	111.3°	154.9°
C4	C3	O3	H3	119.7°	120.3°
C3	C4	O4	C5	118.5°	119.7°
C3	C4	O4	H4	123.5°	120.2°
C3	C4	C5	H4	117.9°	120.0°
C3	C4	C5	C6	179.6°	177.6°
C3	C4	C5	O5	45.1°	57.7°
C3	C4	C5	H5	68.1°	62.3°
C4	C3	O3	HO3	56.6°	60.5°
C3	C4	O4	HO4	180.0°	179.9°
O3	C3	C4	O4	62.5°	63.3°
O3	C3	C4	C5	179.2°	176.9°
O3	C3	C4	H4	62.0°	56.9°
H3	C3	C4	O4	58.0°	57.0°
H3	C3	C4	C5	60.3°	62.9°
H3	C3	C4	H4	177.5°	177.1°
H3	C3	O3	HO3	63.2°	59.8°
O4	C4	C5	H4	119.9°	120.2°
O4	C4	C5	C6	58.2°	62.5°
O4	C4	C5	O5	167.3°	177.5°
O4	C4	C5	H5	54.1°	57.6°
C4	C5	C6	O5	133.6°	119.9°
C4	C5	C6	H5	112.4°	120.0°
C4	C5	O5	H5	112.6°	120.0°
C4	C5	C6	O6	149.0°	175.0°
C4	C5	C6	H61	29.3°	55.1°
C4	C5	C6	H62	91.3°	65.0°
C5	C4	O4	HO4	61.4°	60.3°
H4	C4	C5	C6	61.6°	57.6°
H4	C4	C5	O5	72.9°	62.3°
H4	C4	C5	H5	173.9°	177.7°
H4	C4	O4	HO4	56.5°	59.9°
C6	C5	O5	H5	113.4°	120.1°
C5	C6	O6	H61	119.7°	120.0°
C5	C6	O6	H62	119.7°	120.0°
C5	C6	H61	H62	120.8°	120.0°
C5	C6	O6	S16	108.5°	180.0°
O5	C5	C6	O6	77.4°	65.1°
O5	C5	C6	H61	162.9°	175.0°
O5	C5	C6	H62	42.3°	54.9°
H5	C5	C6	O6	36.6°	55.0°
H5	C5	C6	H61	83.1°	65.0°
H5	C5	C6	H62	156.3°	174.9°
O6	C6	H61	H62	120.8°	120.0°
C6	O6	S16	O19	61.8°	171.4°
C6	O6	S16	O17	178.8°	38.6°
C6	O6	S16	O18	58.9°	75.0°
H61	C6	O6	S16	11.2°	60.1°
H62	C6	O6	S16	131.8°	60.0°
N2	S12	O13	O14	119.4°	122.9°
N2	S12	O13	O15	120.0°	114.1°
N2	S12	O14	O15	120.1°	114.1°
N2	S12	O15	HO15	120.3°	180.0°
HN21	N2	S12	O13	54.9°	1.5°
HN21	N2	S12	O14	174.2°	131.4°
HN21	N2	S12	O15	65.1°	115.0°
O6	S16	O19	O17	118.3°	122.9°
O6	S16	O19	O18	120.5°	114.1°
O6	S16	O17	O18	119.6°	114.1°
O6	S16	O18	HO18	118.6°	180.0°
O13	S12	O14	O15	120.0°	123.0°
O13	S12	O15	HO15	0.0°	66.5°
O14	S12	O15	HO15	119.8°	66.4°
O19	S16	O17	O18	121.1°	123.0°
O19	S16	O18	HO18	121.0°	66.4°
O17	S16	O18	HO18	0.0°	66.5°

Release date:	2018-02-21
Definition date:	2016-08-25
Last modified:	2020-08-11
Release status:	OBS
Processing site:	EBI
Replaced by:	SGN
Derived from:	5G6U