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YJ9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.53Å
C1N10sing1.47Å1.44Å
C1C13sing1.54Å1.53Å
C1H1sing1.09Å1.10Å
C2N3sing1.35Å1.37Å
C2O6doub1.21Å1.25Å
N3C4sing1.47Å1.41Å
N3HN3sing0.97Å1.00Å
C4C5sing1.51Å1.47Å
C4C7sing1.53Å1.52Å
C4C8sing1.53Å1.52Å
C5N9doub1.28Å1.30Å
C7C8sing1.53Å1.50Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
N10C11sing1.47Å1.45Å
N10C24sing1.35Å1.37Å
C11C12sing1.55Å1.55Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C12C13sing1.55Å1.52Å
C12S14sing1.81Å1.73Å
C12H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
S14C15sing1.76Å1.71Å
S14O22doub1.42Å1.42Å
S14O23doub1.42Å1.41Å
C15C16doub1.38Å1.40ÅAromatic
C15C20sing1.38Å1.43ÅAromatic
C16C17sing1.38Å1.40ÅAromatic
C16CLsing1.74Å1.67Å
C17C18doub1.38Å1.38ÅAromatic
C17H17sing1.08Å1.08Å
C18C19sing1.38Å1.39ÅAromatic
C18H18sing1.08Å1.08Å
C19C20doub1.38Å1.39ÅAromatic
C19H19sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
C24O25doub1.21Å1.26Å
C24C27sing1.51Å1.50Å
C26C27sing1.53Å1.51Å
C26C28sing1.53Å1.50Å
C26H26sing1.09Å1.10Å
C26H26Asing1.09Å1.10Å
C27C28sing1.53Å1.50Å
C27C33sing1.51Å1.49Å
C28H28sing1.09Å1.10Å
C28H28Asing1.09Å1.10Å
C29C30doub1.38Å1.40ÅAromatic
C29C34sing1.38Å1.40ÅAromatic
C29H29sing1.08Å1.08Å
C30C31sing1.38Å1.38ÅAromatic
C30C35sing1.51Å1.52Å
C31C32doub1.38Å1.39ÅAromatic
C31H31sing1.08Å1.08Å
C32C33sing1.38Å1.40ÅAromatic
C32H32sing1.08Å1.08Å
C33C34doub1.38Å1.41ÅAromatic
C34H34sing1.08Å1.08Å
C35F36sing1.40Å1.33Å
C35F37sing1.40Å1.34Å
C35F38sing1.40Å1.34Å
C5H5sing1.08Å1.08Å
N9H9sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1N10114.7°109.9°
C2C1C13108.2°109.9°
C2C1H1105.6°109.9°
C1C2N3114.5°120.0°
C1C2O6120.9°120.0°
N10C1C13105.4°107.3°
N10C1H1108.4°109.9°
C1N10C11111.0°108.7°
C1N10C24119.5°125.6°
C13C1H1114.8°110.0°
C1C13C12103.4°102.9°
C1C13H13111.6°110.7°
C1C13H13A111.5°110.7°
N3C2O6124.5°120.0°
C2N3C4124.3°120.0°
C2N3HN3117.9°120.0°
C4N3HN3117.8°120.0°
N3C4C5111.2°115.5°
N3C4C7122.2°117.5°
N3C4C8119.7°117.5°
C5C4C7117.3°117.5°
C5C4C8118.5°117.5°
C4C5N9127.5°120.0°
C4C5H5116.2°120.0°
C7C4C859.0°60.1°
C4C7C860.5°60.0°
C4C7H7130.6°117.5°
C4C7H7A130.6°117.5°
C4C8C760.5°60.0°
C4C8H8130.6°117.5°
C4C8H8A130.6°117.6°
N9C5H5116.2°120.0°
C5N9H9112.0°120.0°
C8C7H7130.6°117.5°
C8C7H7A130.6°117.5°
C7C8H8130.6°117.5°
C7C8H8A130.6°117.5°
H7C7H7A82.2°115.6°
H8C8H8A82.2°115.5°
C11N10C24127.7°125.7°
N10C11C12104.8°104.8°
N10C11H11111.1°110.5°
N10C11H11A111.0°110.4°
N10C24O25118.1°120.0°
N10C24C27118.1°120.0°
C12C11H11111.1°110.3°
C12C11H11A111.1°110.3°
C11C12C13101.9°101.6°
C11C12S14115.8°111.1°
C11C12H12110.8°111.0°
H11C11H11A107.8°110.4°
C13C12S14110.4°111.0°
C13C12H12116.1°111.0°
C12C13H13111.5°110.7°
C12C13H13A111.5°110.7°
S14C12H12102.3°110.9°
C12S14C15103.8°104.5°
C12S14O22106.4°110.6°
C12S14O23108.1°110.5°
H13C13H13A107.3°110.8°
C15S14O22111.4°104.3°
C15S14O23107.9°104.2°
S14C15C16126.1°120.0°
S14C15C20120.5°120.0°
O22S14O23118.3°121.0°
C16C15C20113.4°120.0°
C15C16C17124.7°120.0°
C15C16CL120.2°120.0°
C15C20C19122.6°120.0°
C15C20H20118.7°120.0°
C17C16CL115.1°120.0°
C16C17C18119.4°120.0°
C16C17H17120.3°120.1°
C18C17H17120.3°120.0°
C17C18C19118.6°120.0°
C17C18H18120.7°120.0°
C19C18H18120.7°120.0°
C18C19C20121.3°120.0°
C18C19H19119.3°120.0°
C20C19H19119.4°120.0°
C19C20H20118.7°120.0°
O25C24C27123.8°120.0°
C24C27C26113.1°117.5°
C24C27C28117.9°117.5°
C24C27C33111.5°115.6°
C27C26C2859.9°60.0°
C27C26H26131.0°117.5°
C27C26H26A131.0°117.5°
C26C27C2859.7°60.0°
C26C27C33123.0°117.5°
C28C26H26130.9°117.5°
C28C26H26A131.0°117.5°
C26C28C2760.4°60.0°
C26C28H28130.6°117.5°
C26C28H28A130.7°117.5°
H26C26H26A81.7°115.5°
C28C27C33122.5°117.5°
C27C28H28130.7°117.5°
C27C28H28A130.7°117.5°
C27C33C32118.5°120.0°
C27C33C34123.0°120.0°
H28C28H28A82.2°115.6°
C30C29C34119.4°120.0°
C30C29H29120.3°120.0°
C29C30C31120.6°120.0°
C29C30C35121.0°120.0°
C34C29H29120.3°120.1°
C29C34C33120.4°120.0°
C29C34H34119.8°120.0°
C31C30C35118.3°120.0°
C30C31C32119.5°120.0°
C30C31H31120.2°120.0°
C30C35F36115.4°109.5°
C30C35F37114.9°109.4°
C30C35F38112.2°109.5°
C32C31H31120.3°120.0°
C31C32C33121.6°119.9°
C31C32H32119.2°120.0°
C33C32H32119.2°120.0°
C32C33C34118.5°120.0°
C33C34H34119.8°120.0°
F36C35F37102.6°109.5°
F36C35F38104.1°109.5°
F37C35F38106.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1N10C13118.9°119.4°
C2C1N10H1117.7°121.0°
C2C1C13H1117.6°121.1°
C1C2N3O6177.0°180.0°
C1C2N3C4176.6°180.0°
C1C2N3HN33.4°0.0°
C2C1N10C11127.7°120.5°
C2C1N10C2466.4°59.6°
C2C1C13C12151.7°97.2°
C2C1C13H1331.7°21.1°
C2C1C13H13A88.3°144.5°
N10C1C13H1119.2°119.5°
N10C1C2N3125.5°180.0°
N10C1C2O657.4°0.0°
C1N10C11C24164.5°179.9°
C1N10C11C1214.3°24.2°
C1N10C11H11134.3°94.7°
C1N10C11H11A105.7°142.9°
N10C1C13C1228.6°22.1°
N10C1C13H1391.4°140.5°
N10C1C13H13A148.6°96.2°
C1N10C24O252.3°1.0°
C1N10C24C27176.9°179.0°
C13C1C2N3117.1°62.2°
C13C1C2O660.0°117.8°
C13C1N10C118.8°1.1°
C13C1N10C24174.7°179.0°
C1C13C12C1136.1°35.5°
C1C13C12H13120.0°118.4°
C1C13C12H13A120.0°118.3°
C1C13C12S1487.4°153.6°
C1C13C12H12156.7°82.6°
C1C13H13H13A122.4°123.2°
H1C1C2N36.3°59.0°
H1C1C2O6176.6°121.0°
H1C1N10C11114.7°118.5°
H1C1N10C2451.3°61.4°
H1C1C13C1290.6°141.7°
H1C1C13H13149.3°99.9°
H1C1C13H13A29.4°23.4°
C2N3C4HN3180.0°180.0°
C2N3C4C591.7°34.4°
C2N3C4C753.9°179.9°
C2N3C4C8124.0°111.2°
O6C2N3C40.4°0.0°
O6C2N3HN3179.6°180.0°
N3C4C5C7147.5°145.7°
N3C4C5C8144.8°145.6°
N3C4C7C8107.8°107.5°
N3C4C5N9172.5°25.6°
N3C4C7H7132.2°145.0°
N3C4C7H7A12.2°0.0°
N3C4C8H88.1°0.1°
N3C4C8H8A128.1°145.0°
N3C4C5H57.5°154.5°
HN3N3C4C588.3°145.6°
HN3N3C4C7126.0°0.1°
HN3N3C4C856.0°68.8°
C5C4C7C8108.5°107.5°
C4C5N9H5180.0°179.9°
C5C4C7H711.5°0.0°
C5C4C7H7A131.6°145.0°
C5C4C8H8133.6°145.0°
C5C4C8H8A13.6°0.1°
C4C5N9H9180.0°179.9°
C7C4C5N940.0°120.1°
C4C7C8H7120.0°107.4°
C4C7C8H7A120.0°107.5°
C4C7H7H7A138.5°145.7°
C7C4C8H8120.0°107.5°
C7C4C8H8A120.0°107.5°
C7C4C5H5140.0°59.8°
C8C4C5N927.8°171.2°
C4C8H8H8A138.4°145.8°
C8C4C5H5152.3°8.9°
C8C7H7H7A138.4°145.8°
C7C8H8H8A138.4°145.6°
H7C7C8H8120.0°145.0°
H7C7C8H8A0.1°0.1°
H7AC7C8H80.0°0.1°
H7AC7C8H8A119.9°145.0°
N10C11C12H11120.0°118.9°
N10C11C12H11A120.0°118.8°
N10C11H11H11A121.9°122.4°
N10C11C12C1331.3°37.0°
N10C11C12S1488.5°155.1°
N10C11C12H12155.5°81.0°
C11N10C24O25165.6°178.8°
C11N10C24C2713.5°1.1°
C24N10C11C12150.2°155.9°
C24N10C11H1130.2°85.2°
C24N10C11H11A89.8°37.2°
N10C24O25C27179.1°180.0°
N10C24C27C2687.3°123.0°
N10C24C27C28154.1°54.4°
N10C24C27C3356.3°91.3°
C12C11H11H11A121.9°122.2°
C11C12C13S14123.6°118.1°
C11C12C13H12120.5°118.1°
C11C12S14H12120.7°124.0°
C11C12C13H1383.9°153.9°
C11C12C13H13A156.1°82.8°
C11C12S14C1560.6°169.6°
C11C12S14O22178.2°78.7°
C11C12S14O2353.8°58.0°
H11C11C12C13151.3°81.9°
H11C11C12S1431.5°36.1°
H11C11C12H1284.5°160.1°
H11AC11C12C1388.7°155.8°
H11AC11C12S14151.5°86.1°
H11AC11C12H1235.5°37.8°
C13C12S14H12124.2°123.8°
C12C13H13H13A122.4°123.2°
C13C12S14C15175.7°78.2°
C13C12S14O2266.7°33.4°
C13C12S14O2361.3°170.2°
S14C12C13H13152.6°88.0°
S14C12C13H13A32.6°35.3°
C12S14C15O22114.1°116.1°
C12S14C15O23114.5°116.0°
C12S14O22O23121.7°131.5°
C12S14C15C1671.9°68.0°
C12S14C15C20106.8°111.7°
H12C12C13H1336.7°35.8°
H12C12C13H13A83.3°159.1°
H12C12S14C1560.1°45.6°
H12C12S14O2257.6°157.3°
H12C12S14O23174.5°66.0°
C15S14O22O23125.9°116.7°
S14C15C16C20178.8°179.6°
S14C15C16C17179.9°179.9°
S14C15C16CL1.6°0.1°
S14C15C20C19179.4°179.8°
S14C15C20H200.6°0.1°
O22S14C15C1642.2°175.9°
O22S14C15C20139.1°4.5°
O23S14C15C16173.6°48.1°
O23S14C15C207.7°132.3°
C15C16C17CL178.4°180.0°
C15C16C17C181.6°0.0°
C15C16C17H17178.4°180.0°
C16C15C20C190.5°0.5°
C16C15C20H20179.5°179.7°
C20C15C16C171.3°0.3°
C20C15C16CL179.5°179.7°
C15C20C19C180.1°0.5°
C15C20C19H20180.0°179.7°
C15C20C19H19179.9°179.6°
C16C17C18H17180.0°180.0°
C16C17C18C191.0°0.1°
C16C17C18H18179.0°180.0°
CLC16C17C18179.9°180.0°
CLC16C17H170.0°0.0°
C17C18C19H18180.0°179.9°
C17C18C19C200.3°0.2°
C17C18C19H19179.7°179.9°
H17C17C18C19179.0°179.9°
H17C17C18H181.0°0.0°
C18C19C20H19180.0°179.9°
C18C19C20H20179.9°179.8°
H18C18C19C20179.6°179.7°
H18C18C19H190.4°0.1°
H19C19C20H200.1°0.1°
O25C24C27C2691.8°57.1°
O25C24C27C2825.0°125.7°
O25C24C27C33124.6°88.6°
C24C27C26C28109.9°107.4°
C24C27C26C33138.8°145.0°
C24C27C26H26130.1°145.0°
C24C27C26H26A10.1°0.0°
C24C27C28C33146.0°145.0°
C24C27C28H28138.2°145.0°
C24C27C28H28A18.1°0.0°
C24C27C33C3256.3°61.8°
C24C27C33C34122.4°118.2°
C27C26C28H26120.0°107.5°
C27C26C28H26A120.0°107.5°
C27C26H26H26A138.6°145.7°
C26C27C28C33112.1°107.5°
C27C26C28H28120.0°107.5°
C27C26C28H28A120.0°107.5°
C26C27C33C32164.3°152.5°
C26C27C33C3417.0°27.5°
C28C26H26H26A138.6°145.7°
C26C28H28H28A138.5°145.7°
H26C26C27C338.7°0.0°
H26C26C28H280.0°0.0°
H26C26C28H28A120.0°145.0°
H26AC26C27C33128.7°145.0°
H26AC26C28H28120.0°145.0°
H26AC26C28H28A0.0°0.0°
C27C28H28H28A138.5°145.7°
C28C27C33C3291.7°83.9°
C28C27C33C3489.6°96.1°
C33C27C28H287.8°0.0°
C33C27C28H28A127.9°145.0°
C27C33C34C29178.0°180.0°
C27C33C32C31178.7°180.0°
C27C33C32C34178.7°180.0°
C27C33C32H321.3°0.0°
C27C33C34H342.0°0.0°
C30C29C34H29180.0°179.7°
C29C30C31C35178.8°180.0°
C29C30C31C320.7°0.0°
C29C30C31H31179.4°180.0°
C30C29C34C330.7°0.0°
C30C29C34H34179.3°180.0°
C29C30C35F36159.8°90.0°
C29C30C35F3740.6°150.0°
C29C30C35F3881.2°30.0°
C34C29C30C310.0°0.0°
C34C29C30C35178.8°180.0°
C29C34C33C320.7°0.0°
C29C34C33H34180.0°180.0°
H29C29C30C31180.0°179.7°
H29C29C30C351.2°0.3°
H29C29C34C33179.3°179.7°
H29C29C34H340.7°0.3°
C30C31C32H31180.0°179.9°
C30C31C32C330.7°0.0°
C30C31C32H32179.4°180.0°
C31C30C35F3621.4°90.0°
C31C30C35F37140.5°30.0°
C31C30C35F3897.6°150.0°
C35C30C31C32179.5°180.0°
C35C30C31H310.5°0.1°
C30C35F36F37125.7°120.0°
C30C35F36F38123.4°120.0°
C30C35F37F38124.9°120.0°
C31C32C33H32180.0°180.0°
C31C32C33C340.0°0.0°
H31C31C32C33179.4°180.0°
H31C31C32H320.6°0.0°
C32C33C34H34179.3°180.0°
H32C32C33C34180.0°180.0°
F36C35F37F38109.1°120.0°
H5C5N9H90.0°0.0°

222415

PDB entries from 2024-07-10

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