Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YIZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11C10sing1.51Å1.53Å
O12C10doub1.21Å1.19Å
C10N09sing1.35Å1.45Å
N09C08sing1.47Å1.45Å
C08C07sing1.51Å1.53Å
C07C06doub1.38Å1.38ÅAromatic
C07C13sing1.38Å1.38ÅAromatic
C06C05sing1.38Å1.38ÅAromatic
C13C14doub1.38Å1.39ÅAromatic
C05C04doub1.40Å1.39ÅAromatic
C14C04sing1.40Å1.38ÅAromatic
C04C03sing1.48Å1.52Å
C03N02sing1.35Å1.45Å
C03O15doub1.22Å1.20Å
N02O01sing1.42Å1.41Å
C11H1sing1.09Å1.10Å
C11H2sing1.09Å1.10Å
C11H3sing1.09Å1.10Å
C05H4sing1.08Å1.08Å
C06H5sing1.08Å1.08Å
C08H6sing1.09Å1.10Å
C08H7sing1.09Å1.10Å
C13H8sing1.08Å1.08Å
C14H9sing1.08Å1.08Å
N02H10sing0.97Å1.00Å
N09H11sing0.97Å1.00Å
O01H12sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C11C10O12121.0°120.0°
C11C10N09118.4°120.0°
C10C11H1109.5°109.5°
C10C11H2109.5°109.5°
C10C11H3109.5°109.5°
O12C10N09120.6°120.0°
C10N09C08118.6°120.0°
C10N09H11120.7°120.0°
N09C08C07112.6°109.5°
N09C08H6108.7°109.5°
N09C08H7108.7°109.5°
C08N09H11120.7°120.0°
C08C07C06119.7°119.8°
C08C07C13120.1°119.9°
C07C08H6108.7°109.5°
C07C08H7108.7°109.5°
C06C07C13120.2°120.3°
C07C06C05119.5°120.1°
C07C06H5120.3°119.9°
C07C13C14120.4°120.2°
C07C13H8119.8°119.9°
C06C05C04120.5°119.9°
C06C05H4119.8°120.1°
C05C06H5120.2°120.0°
C13C14C04119.1°119.8°
C14C13H8119.8°119.9°
C13C14H9120.4°120.1°
C05C04C14120.3°119.7°
C05C04C03118.5°120.1°
C04C05H4119.8°120.1°
C14C04C03121.1°120.1°
C04C14H9120.5°120.1°
C04C03N02117.9°120.0°
C04C03O15121.7°120.0°
N02C03O15120.4°120.0°
C03N02O01119.9°120.0°
C03N02H10120.1°119.9°
O01N02H10120.0°120.1°
N02O01H12109.5°114.0°
H1C11H2109.5°109.5°
H1C11H3109.5°109.4°
H2C11H3109.5°109.5°
H6C08H7109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C11C10O12N09179.6°179.7°
C11C10N09C08179.3°180.0°
C10C11H1H2120.0°120.0°
C10C11H1H3120.0°120.0°
C10C11H2H3120.0°120.0°
C11C10N09H110.7°0.0°
O12C10N09C081.0°0.3°
O12C10C11H10.0°179.7°
O12C10C11H2120.0°60.3°
O12C10C11H3120.0°59.7°
O12C10N09H11179.0°179.7°
C10N09C08H11180.0°180.0°
C10N09C08C0798.5°180.0°
N09C10C11H1179.7°0.0°
N09C10C11H259.7°120.0°
N09C10C11H360.3°120.0°
C10N09C08H622.0°60.0°
C10N09C08H7141.1°60.0°
N09C08C07H6120.4°120.0°
N09C08C07H7120.5°120.0°
N09C08C07C0657.1°90.0°
N09C08C07C13124.5°90.0°
N09C08H6H7118.6°120.0°
C08C07C06C13178.4°180.0°
C08C07C06C05179.2°180.0°
C08C07C13C14179.0°179.7°
C08C07C06H50.8°0.0°
C07C08H6H7118.6°120.0°
C08C07C13H80.9°0.0°
C07C08N09H1181.6°0.0°
C07C06C05H5180.0°180.0°
C06C07C13C140.7°0.3°
C07C06C05C040.9°0.0°
C07C06C05H4179.0°180.0°
C06C07C08H663.3°150.0°
C06C07C08H7177.6°30.0°
C06C07C13H8179.3°180.0°
C13C07C06C050.9°0.0°
C07C13C14H8180.0°179.7°
C07C13C14C040.5°0.5°
C13C07C06H5179.1°180.0°
C13C07C08H6115.0°30.0°
C13C07C08H74.1°150.0°
C07C13C14H9179.5°180.0°
C06C05C04H4180.0°180.0°
C06C05C04C140.8°0.2°
C06C05C04C03179.4°180.0°
C13C14C04C050.6°0.5°
C13C14C04H9180.0°179.5°
C13C14C04C03179.2°179.7°
C05C04C14C03178.6°179.8°
C05C04C03N027.5°180.0°
C05C04C03O15170.8°0.1°
C04C05C06H5179.1°180.0°
C05C04C14H9179.4°180.0°
C14C04C03N02173.9°0.2°
C14C04C03O157.8°179.7°
C14C04C05H4179.2°179.8°
C04C14C13H8179.4°179.7°
C04C03N02O15178.3°180.0°
C04C03N02O01179.6°180.0°
C03C04C05H40.5°0.0°
C03C04C14H90.8°0.2°
C04C03N02H100.4°0.0°
C03N02O01H10180.0°180.0°
C03N02O01H120.6°180.0°
O15C03N02O011.3°0.0°
O15C03N02H10178.7°180.0°
H1C11H2H3120.0°119.9°
H4C05C06H51.0°0.0°
H6C08N09H11158.0°120.0°
H7C08N09H1138.9°120.0°
H8C13C14H90.6°0.2°
H10N02O01H12179.4°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon