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YIO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.59Å
C1O5sing1.43Å1.46Å
C1S1sing1.81Å1.87Å
C2C3sing1.53Å1.57Å
C2O2sing1.43Å1.46Å
C3C4sing1.53Å1.50Å
C3O3sing1.43Å1.44Å
C4C5sing1.53Å1.53Å
C4O4sing1.43Å1.40Å
C5C6sing1.53Å1.51Å
C5O5sing1.43Å1.41Å
C6O6sing1.43Å1.42Å
C1H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
C4H4sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C5H5sing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
S1HS1sing1.34Å1.30Å
O6HO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O5101.7°109.4°
C2C1S1128.7°109.5°
C1C2C3107.9°109.1°
C1C2O2113.6°109.5°
C2C1H1101.2°109.5°
C1C2H2108.2°109.5°
O5C1S1106.4°109.4°
C1O5C5107.6°114.1°
O5C1H1125.7°109.5°
S1C1H196.0°109.5°
C1S1HS1109.5°103.0°
C3C2O2110.8°109.5°
C2C3C4111.4°109.0°
C2C3O3115.9°109.5°
C3C2H2111.2°109.5°
C2C3H3102.9°109.6°
O2C2H2105.2°109.6°
C2O2HO2109.5°114.0°
C4C3O3107.6°109.6°
C3C4C5110.5°109.2°
C3C4O4108.5°109.5°
C4C3H3111.9°109.5°
C3C4H4110.0°109.5°
O3C3H3107.1°109.6°
C3O3HO3109.5°114.0°
C5C4O4111.0°109.5°
C4C5C6113.3°109.5°
C4C5O5109.8°109.5°
C5C4H4107.4°109.6°
C4C5H5107.1°109.5°
O4C4H4109.5°109.6°
C4O4HO4109.5°114.0°
C6C5O5110.9°109.5°
C5C6O6106.9°109.5°
C6C5H5105.9°109.4°
C5C6H61110.4°109.5°
C5C6H62110.9°109.4°
O5C5H5109.6°109.5°
O6C6H61110.3°109.5°
O6C6H62110.9°109.5°
C6O6HO6109.5°114.0°
H61C6H62107.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O5S1136.6°120.0°
C2C1O5H1113.2°120.0°
C2C1S1H1109.6°120.0°
C1C2C3O2124.9°119.9°
C1C2C3H2118.5°119.9°
C1C2O2H2118.1°120.2°
C1C2C3C453.0°57.0°
C1C2C3O3176.4°176.8°
C2C1O5C576.1°61.2°
C1C2C3H367.1°62.9°
C1C2O2HO2102.9°60.0°
C2C1S1HS1151.1°180.0°
O5C1S1H1130.0°120.0°
O5C1C2C364.6°57.6°
O5C1C2O2172.2°177.5°
C1O5C5C473.1°61.2°
C1O5C5C6160.9°178.8°
O5C1C2H255.8°62.2°
C1O5C5H544.3°58.9°
O5C1S1HS188.5°60.1°
S1C1C2C3173.1°177.6°
S1C1C2O249.9°62.6°
S1C1O5C5147.4°178.9°
S1C1C2H266.5°57.7°
C3C2O2H2120.2°120.2°
C2C3C4O3128.1°119.8°
C2C3C4H3114.6°119.9°
C2C3O3H3114.1°120.3°
C2C3C4C546.5°57.0°
C2C3C4O475.3°62.9°
C3C2C1H165.9°62.4°
C3C2O2HO2135.5°179.7°
C2C3C4H4165.0°176.9°
C2C3O3HO321.8°60.0°
O2C2C3C4177.9°176.9°
O2C2C3O358.6°63.3°
O2C2C1H157.3°57.5°
O2C2C3H357.9°57.0°
C4C3O3H3120.5°120.2°
C3C4C5O4120.4°119.9°
C3C4C5H4120.0°119.9°
C3C4O4H4120.0°120.1°
C3C4C5C6179.6°177.6°
C3C4C5O555.7°57.6°
C4C3C2H265.5°62.9°
C4C3O3HO3103.6°179.6°
C3C4C5H563.2°62.4°
C3C4O4HO4160.9°60.0°
O3C3C4C5174.6°176.8°
O3C3C4O452.8°56.9°
O3C3C2H258.0°57.0°
O3C3C4H467.0°63.2°
C5C4O4H4118.4°120.2°
C4C5C6O5124.1°120.0°
C4C5C6H5117.1°120.0°
C4C5O5H5117.4°120.0°
C4C5C6O657.2°175.0°
C5C4C3H368.0°62.9°
C5C4O4HO477.5°179.7°
C4C5C6H6162.8°55.0°
C4C5C6H62178.2°65.0°
O4C4C5C660.0°57.7°
O4C4C5O564.6°62.3°
O4C4C3H3170.1°177.2°
O4C4C5H5176.4°177.7°
C6C5O5H5116.6°120.0°
C5C6O6H61120.0°120.0°
C5C6O6H62121.0°120.0°
C6C5C4H459.6°62.5°
C5C6H61H62121.1°120.0°
C5C6O6HO671.9°180.0°
O5C5C6O6178.8°65.0°
C5O5C1H137.2°58.8°
O5C5C4H4175.7°177.5°
O5C5C6H6161.2°175.0°
O5C5C6H6257.8°55.0°
O6C6C5H559.9°55.0°
O6C6H61H62121.0°120.0°
H1C1C2H2173.7°177.8°
H1C1S1HS141.5°60.0°
H2C2C3H3174.4°177.3°
H2C2O2HO215.3°60.1°
H3C3C4H450.4°57.0°
H3C3O3HO3135.9°60.2°
H4C4C5H556.7°57.5°
H4C4O4HO440.9°60.1°
H5C5C6H61179.9°65.0°
H5C5C6H6261.1°175.0°
H61C6O6HO648.1°60.0°
H62C6O6HO6167.1°60.0°

246704

PDB entries from 2025-12-24

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