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YHR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C40O39sing1.43Å1.42Å
O39C37sing1.36Å1.37Å
O41C42sing1.43Å1.42Å
O41C36sing1.36Å1.38Å
C37C36doub1.39Å1.40ÅAromatic
C37C38sing1.38Å1.38ÅAromatic
C36C35sing1.39Å1.40ÅAromatic
C38C33doub1.40Å1.39ÅAromatic
C35O43sing1.36Å1.36Å
C35C34doub1.38Å1.38ÅAromatic
O43C44sing1.43Å1.42Å
C33C34sing1.40Å1.39ÅAromatic
C33C31sing1.47Å1.49Å
O32C31doub1.21Å1.21Å
C31O30sing1.35Å1.34Å
O30C4sing1.45Å1.46Å
C4C5sing1.53Å1.51Å
C4C3sing1.53Å1.52Å
O2C1sing1.43Å1.42Å
O2C3sing1.43Å1.42Å
C5C6sing1.53Å1.53Å
C3C16sing1.53Å1.53Å
C6C7sing1.53Å1.53Å
C6C15sing1.53Å1.54Å
C16C15sing1.53Å1.54Å
C16C17sing1.51Å1.51Å
C7N8sing1.47Å1.51Å
C15C14sing1.53Å1.53Å
C17O18doub1.21Å1.20Å
C17O19sing1.34Å1.33Å
O19C20sing1.45Å1.45Å
N8C9sing1.48Å1.50Å
N8C13sing1.47Å1.51Å
C14C13sing1.52Å1.52Å
C9C10sing1.54Å1.52Å
C13C12sing1.51Å1.45Å
C10C11sing1.51Å1.50Å
C12C11doub1.35Å1.36ÅAromatic
C12N21sing1.37Å1.38ÅAromatic
C11C23sing1.45Å1.44ÅAromatic
N21C22sing1.37Å1.38ÅAromatic
C23C22doub1.42Å1.41ÅAromatic
C23C24sing1.40Å1.39ÅAromatic
C22C27sing1.39Å1.39ÅAromatic
C24C25doub1.37Å1.39ÅAromatic
C27C26doub1.39Å1.39ÅAromatic
C25C26sing1.39Å1.39ÅAromatic
C26O28sing1.36Å1.37Å
O28C29sing1.43Å1.42Å
C4H1sing1.09Å1.10Å
C3H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
C1H5sing1.09Å1.10Å
C10H6sing1.09Å1.10Å
C10H7sing1.09Å1.10Å
C13H8sing1.09Å1.10Å
C14H9sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C15H11sing1.09Å1.10Å
C16H12sing1.09Å1.10Å
C20H13sing1.09Å1.10Å
C20H14sing1.09Å1.10Å
C20H15sing1.09Å1.10Å
C24H16sing1.08Å1.08Å
C25H17sing1.08Å1.08Å
C27H18sing1.08Å1.08Å
C29H19sing1.09Å1.10Å
C29H20sing1.09Å1.10Å
C29H21sing1.09Å1.10Å
C34H22sing1.08Å1.08Å
C38H23sing1.08Å1.08Å
C40H24sing1.09Å1.10Å
C40H25sing1.09Å1.10Å
C40H26sing1.09Å1.10Å
C42H27sing1.09Å1.10Å
C42H28sing1.09Å1.10Å
C42H29sing1.09Å1.10Å
C44H30sing1.09Å1.10Å
C44H31sing1.09Å1.10Å
C44H32sing1.09Å1.10Å
C5H33sing1.09Å1.10Å
C5H34sing1.09Å1.10Å
C6H35sing1.09Å1.10Å
C7H36sing1.09Å1.10Å
C7H37sing1.09Å1.10Å
C9H38sing1.09Å1.10Å
C9H39sing1.09Å1.10Å
N21H40sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C40O39C37117.5°117.0°
O39C40H24109.5°109.5°
O39C40H25109.5°109.5°
O39C40H26109.5°109.4°
O39C37C36115.6°120.0°
O39C37C38124.2°120.0°
C42O41C36115.1°117.0°
O41C42H27109.5°109.5°
O41C42H28109.5°109.6°
O41C42H29109.5°109.5°
O41C36C37120.2°119.9°
O41C36C35120.1°120.0°
C36C37C38120.2°120.1°
C37C36C35119.6°120.1°
C37C38C33119.8°120.0°
C37C38H23120.1°120.0°
C36C35O43115.6°120.0°
C36C35C34120.2°120.1°
C38C33C34120.2°119.8°
C38C33C31120.0°120.1°
C33C38H23120.1°120.0°
O43C35C34124.2°120.0°
C35O43C44117.5°117.0°
C35C34C33119.9°120.0°
C35C34H22120.0°120.1°
O43C44H30109.5°109.5°
O43C44H31109.5°109.4°
O43C44H32109.4°109.5°
C34C33C31119.8°120.1°
C33C34H22120.0°120.0°
C33C31O32124.3°120.0°
C33C31O30111.8°120.0°
O32C31O30123.9°120.0°
C31O30C4117.6°117.0°
O30C4C5110.1°109.5°
O30C4C3108.5°109.5°
O30C4H1110.0°109.5°
C5C4C3109.9°109.4°
C4C5C6107.9°109.5°
C5C4H1109.2°109.5°
C4C5H33109.8°109.5°
C4C5H34109.9°109.4°
C4C3O2108.8°109.5°
C4C3C16109.1°109.4°
C3C4H1109.1°109.5°
C4C3H2110.4°109.4°
C1O2C3114.5°114.0°
O2C1H3109.5°109.5°
O2C1H4109.5°109.4°
O2C1H5109.5°109.5°
O2C3C16106.2°109.5°
O2C3H2111.9°109.5°
C5C6C7112.4°109.4°
C5C6C15110.9°109.4°
C6C5H33109.9°109.5°
C6C5H34109.9°109.4°
C5C6H35106.7°109.7°
C3C16C15111.6°109.6°
C3C16C17112.0°109.4°
C16C3H2110.3°109.5°
C3C16H12107.1°109.4°
C7C6C15113.0°108.7°
C6C7N8112.5°110.0°
C7C6H35106.7°109.6°
C6C7H36108.7°109.4°
C6C7H37108.7°109.4°
C6C15C16111.1°109.5°
C6C15C14108.4°108.6°
C6C15H11107.7°109.6°
C15C6H35106.6°110.1°
C15C16C17111.5°109.4°
C16C15C14113.9°109.6°
C16C15H11107.7°110.0°
C15C16H12106.9°109.5°
C16C17O18125.1°120.0°
C16C17O19111.0°120.0°
C17C16H12107.3°109.5°
C7N8C9110.8°109.2°
C7N8C13111.1°111.6°
N8C7H36108.7°109.4°
N8C7H37108.7°109.4°
C15C14C13109.9°110.3°
C15C14H9109.4°109.4°
C15C14H10109.4°109.2°
C14C15H11107.8°109.6°
O18C17O19123.9°120.0°
C17O19C20115.8°117.0°
O19C20H13109.5°109.4°
O19C20H14109.5°109.4°
O19C20H15109.5°109.4°
C9N8C13110.3°109.9°
N8C9C10112.5°108.9°
N8C9H38108.7°109.5°
N8C9H39108.7°109.6°
N8C13C14112.7°111.7°
N8C13C12108.5°108.6°
N8C13H8106.8°108.6°
C14C13C12114.3°111.4°
C14C13H8106.6°107.9°
C13C14H9109.4°109.3°
C13C14H10109.4°109.3°
C9C10C11109.8°108.4°
C9C10H6109.4°109.7°
C9C10H7109.4°109.7°
C10C9H38108.7°109.6°
C10C9H39108.7°109.6°
C13C12C11126.1°122.3°
C13C12N21123.8°127.9°
C12C13H8107.4°108.6°
C10C11C12122.0°123.5°
C10C11C23131.1°129.4°
C11C10H6109.4°109.7°
C11C10H7109.4°109.7°
C11C12N21110.1°109.8°
C12C11C23106.9°107.1°
C12N21C22108.4°109.7°
C12N21H40125.8°125.1°
C11C23C22106.8°106.0°
C11C23C24134.8°132.7°
N21C22C23107.8°107.4°
N21C22C27130.0°132.0°
C22N21H40125.8°125.1°
C22C23C24118.4°121.3°
C23C22C27122.1°120.7°
C23C24C25120.2°117.0°
C23C24H16119.9°121.5°
C22C27C26117.9°116.9°
C22C27H18121.0°121.5°
C24C25C26120.1°122.1°
C25C24H16119.9°121.5°
C24C25H17119.9°119.0°
C27C26C25121.3°122.1°
C27C26O28115.0°118.9°
C26C27H18121.1°121.6°
C25C26O28123.8°119.0°
C26C25H17119.9°118.9°
C26O28C29117.6°117.0°
O28C29H19109.5°109.5°
O28C29H20109.5°109.4°
O28C29H21109.5°109.5°
H3C1H4109.5°109.5°
H3C1H5109.5°109.5°
H4C1H5109.4°109.4°
H6C10H7109.5°109.7°
H9C14H10109.5°109.4°
H13C20H14109.5°109.5°
H13C20H15109.5°109.4°
H14C20H15109.5°109.5°
H19C29H20109.5°109.5°
H19C29H21109.5°109.5°
H20C29H21109.5°109.5°
H24C40H25109.5°109.5°
H24C40H26109.5°109.5°
H25C40H26109.4°109.5°
H27C42H28109.4°109.4°
H27C42H29109.5°109.4°
H28C42H29109.5°109.4°
H30C44H31109.5°109.5°
H30C44H32109.5°109.5°
H31C44H32109.5°109.5°
H33C5H34109.5°109.5°
H36C7H37109.5°109.2°
H38C9H39109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C40O39C37C36179.5°180.0°
C40O39C37C380.1°0.2°
O39C40H24H25120.0°120.0°
O39C40H24H26120.0°120.0°
O39C40H25H26120.0°120.0°
O39C37C36O411.1°0.1°
O39C37C36C38179.6°179.8°
O39C37C36C35179.5°180.0°
O39C37C38C33179.4°179.7°
O39C37C38H230.6°0.2°
C37O39C40H24180.0°180.0°
C37O39C40H2560.0°60.0°
C37O39C40H2660.0°60.0°
C42O41C36C3791.0°90.0°
C42O41C36C3590.6°90.0°
O41C42H27H28120.0°120.1°
O41C42H27H29120.0°120.0°
O41C42H28H29120.0°120.1°
O41C36C37C35178.4°180.0°
O41C36C37C38178.5°179.7°
O41C36C35O430.1°0.0°
O41C36C35C34178.6°180.0°
C36O41C42H27180.0°60.0°
C36O41C42H2860.0°180.0°
C36O41C42H2960.0°60.0°
C36C37C38C330.2°0.5°
C37C36C35O43178.4°180.0°
C37C36C35C340.1°0.0°
C36C37C38H23179.8°180.0°
C38C37C36C350.1°0.3°
C37C38C33H23180.0°179.5°
C37C38C33C340.3°0.5°
C37C38C33C31177.0°179.7°
C36C35O43C34178.4°180.0°
C36C35O43C44174.6°180.0°
C36C35C34C330.3°0.0°
C36C35C34H22179.7°180.0°
C38C33C34C350.4°0.3°
C38C33C34C31177.3°179.7°
C38C33C31O326.8°179.8°
C38C33C31O30173.8°0.3°
C38C33C34H22179.6°179.7°
O43C35C34C33178.1°180.0°
O43C35C34H221.9°0.0°
C35O43C44H30180.0°180.0°
C35O43C44H3160.0°60.0°
C35O43C44H3260.0°59.9°
C34C35O43C443.9°0.0°
C35C34C33H22180.0°180.0°
C35C34C33C31176.9°180.0°
O43C44H30H31120.0°119.9°
O43C44H30H32120.0°120.1°
O43C44H31H32120.0°120.0°
C34C33C31O32170.5°0.1°
C34C33C31O308.8°180.0°
C34C33C38H23179.7°180.0°
C33C31O32O30179.3°179.9°
C33C31O30C4175.5°180.0°
C31C33C34H223.1°0.0°
C31C33C38H233.0°0.3°
O32C31O30C43.8°0.1°
C31O30C4C575.5°90.0°
C31O30C4C3164.2°150.0°
C31O30C4H144.9°30.1°
O30C4C5C3119.5°120.0°
O30C4C5H1120.9°120.0°
O30C4C3H1119.9°120.0°
O30C4C3O261.5°60.0°
O30C4C5C6176.0°179.9°
O30C4C3C16176.9°179.9°
O30C4C3H261.7°60.1°
O30C4C5H3364.2°60.1°
O30C4C5H3456.2°59.9°
C5C4C3H1119.7°120.1°
C5C4C3O2178.1°179.9°
C4C5C6H33119.7°120.0°
C4C5C6H34119.8°120.0°
C5C4C3C1662.7°60.1°
C4C5C6C7172.5°178.9°
C4C5C6C1559.9°60.0°
C5C4C3H258.7°59.9°
C4C5H33H34120.7°120.0°
C4C5C6H3555.8°60.9°
C4C3O2C1107.5°90.0°
C4C3O2C16117.3°119.9°
C4C3O2H2122.3°120.0°
C3C4C5C664.5°60.2°
C4C3C16H2121.5°119.9°
C4C3C16C1555.8°60.0°
C4C3C16C17178.3°180.0°
C4C3C16H1260.9°60.1°
C3C4C5H3355.2°59.9°
C3C4C5H34175.7°179.8°
C1O2C3C16135.2°150.1°
C1O2C3H214.8°30.0°
O2C1H3H4120.0°120.0°
O2C1H3H5120.0°120.1°
O2C1H4H5120.0°119.9°
O2C3C16H2121.5°120.1°
O2C3C16C15172.8°180.0°
O2C3C16C1761.3°60.0°
O2C3C4H158.4°60.0°
C3O2C1H3180.0°60.0°
C3O2C1H460.0°60.0°
C3O2C1H560.0°179.9°
O2C3C16H1256.1°59.9°
C5C6C7C15126.4°119.4°
C5C6C7H35116.7°120.3°
C5C6C15H35115.8°120.6°
C5C6C15C1654.1°59.8°
C5C6C7N874.0°58.4°
C5C6C15C1471.8°59.8°
C6C5C4H155.1°59.9°
C5C6C15H11171.8°179.5°
C6C5H33H34120.7°120.0°
C5C6C7H3646.4°61.8°
C5C6C7H37165.5°178.6°
C3C16C15C652.0°59.9°
C3C16C15C17126.2°119.9°
C3C16C15H12116.8°120.1°
C3C16C17H12117.3°119.9°
C3C16C15C1470.8°59.1°
C3C16C17O18153.1°120.0°
C3C16C17O1927.2°60.0°
C16C3C4H157.0°60.0°
C3C16C15H11169.7°179.7°
C7C6C15H35117.0°120.1°
C7C6C15C16178.6°179.2°
C6C7N8H36120.5°120.2°
C6C7N8H37120.4°120.2°
C7C6C15C1455.4°59.5°
C6C7N8C9173.6°178.8°
C6C7N8C1350.6°59.6°
C7C6C15H1161.0°60.2°
C7C6C5H3367.8°58.8°
C7C6C5H3452.7°61.1°
C6C7H36H37118.6°119.7°
C6C15C16C14122.8°119.0°
C6C15C16H11117.7°120.4°
C6C15C16C17178.2°179.9°
C15C6C7N852.4°61.0°
C6C15C14H11116.3°119.7°
C6C15C14C1357.9°56.9°
C6C15C14H9178.0°63.3°
C6C15C14H1062.2°177.0°
C6C15C16H1264.8°60.1°
C15C6C5H3359.8°60.1°
C15C6C5H34179.7°179.9°
C15C6C7H36172.9°178.8°
C15C6C7H3768.1°59.2°
C15C16C17H12116.8°120.0°
C16C15C14H11119.4°120.8°
C15C16C17O1881.0°0.0°
C15C16C17O1998.7°179.9°
C16C15C14C13177.8°176.5°
C15C16C3H265.7°59.9°
C16C15C14H957.8°56.3°
C16C15C14H1062.1°63.4°
C16C15C6H3561.7°60.8°
C17C16C15C1455.4°60.9°
C16C17O18O19179.6°179.9°
C16C17O19C20180.0°180.0°
C17C16C3H260.2°60.1°
C17C16C15H1164.1°59.7°
C7N8C9C13123.4°122.7°
C7N8C13C1455.0°56.9°
C7N8C9C1058.4°50.1°
C7N8C13C1272.7°66.3°
C7N8C13H8171.8°175.8°
N8C7C6H35169.3°178.7°
N8C7H36H37118.6°119.7°
C7N8C9H38178.8°69.8°
C7N8C9H3962.1°169.9°
C15C14C13N859.6°55.6°
C15C14C13H9120.1°120.3°
C15C14C13H10120.0°120.0°
C15C14C13C1264.9°66.1°
C15C14C13H8176.5°174.9°
C15C14H9H10119.8°119.6°
C14C15C16H12172.4°179.1°
C14C15C6H35172.4°179.6°
O18C17O19C200.4°0.0°
O18C17C16H1235.8°120.1°
O19C17C16H12144.5°59.9°
C17O19C20H13180.0°180.0°
C17O19C20H1460.0°60.0°
C17O19C20H1560.0°60.0°
O19C20H13H14120.0°120.0°
O19C20H13H15120.0°119.9°
O19C20H14H15120.0°120.0°
C9N8C13C14178.3°178.2°
N8C9C10H38120.4°119.8°
N8C9C10H39120.5°119.8°
C9N8C13C1250.6°55.0°
N8C9C10C1142.1°48.4°
N8C9C10H6162.2°71.4°
N8C9C10H777.9°168.1°
C9N8C13H864.9°63.0°
C9N8C7H3666.0°58.6°
C9N8C7H3753.1°61.1°
N8C9H38H39118.6°120.3°
N8C13C14C12124.5°121.7°
N8C13C14H8116.9°119.3°
C13N8C9C1065.1°72.6°
N8C13C12H8115.2°117.9°
N8C13C12C1120.5°19.8°
N8C13C12N21158.6°160.4°
N8C13C14H9179.7°64.7°
N8C13C14H1060.4°175.6°
C13N8C7H36171.0°179.7°
C13N8C7H3769.9°60.6°
C13N8C9H3855.4°167.5°
C13N8C9H39174.5°47.2°
C14C13C12H8118.1°118.6°
C14C13C12C11147.2°143.2°
C14C13C12N2131.9°37.0°
C13C14H9H10119.8°119.6°
C13C14C15H1158.4°62.7°
C9C10C11H6120.1°119.7°
C9C10C11H7120.1°119.7°
C9C10C11C1210.8°14.6°
C9C10C11C23170.8°165.3°
C9C10H6H7119.9°120.5°
C10C9H38H39118.6°120.3°
C13C12C11C100.5°0.3°
C13C12C11N21179.2°179.8°
C13C12C11C23179.2°179.5°
C13C12N21C22179.3°179.5°
C12C13C14H955.1°173.6°
C12C13C14H10175.0°54.0°
C13C12N21H400.7°0.5°
C10C11C12C23178.7°179.9°
C10C11C12N21178.7°179.8°
C10C11C23C22178.6°179.9°
C10C11C23C240.4°0.2°
C11C10H6H7119.8°120.5°
C11C10C9H3878.3°168.2°
C11C10C9H39162.6°71.5°
C11C12N21C220.0°0.3°
C12C11C23C220.0°0.2°
C12C11C23C24179.0°179.7°
C12C11C10H6130.9°105.2°
C12C11C10H7109.3°134.3°
C11C12C13H894.6°98.1°
C11C12N21H40180.0°179.7°
N21C12C11C230.0°0.3°
C12N21C22H40180.0°180.0°
C12N21C22C230.0°0.2°
C12N21C22C27179.0°179.7°
N21C12C13H886.2°81.7°
C11C23C22N210.0°0.0°
C11C23C22C24179.2°179.9°
C11C23C22C27179.1°179.9°
C11C23C24C25178.7°179.9°
C23C11C10H650.7°75.0°
C23C11C10H769.1°45.6°
C11C23C24H161.2°0.1°
N21C22C23C27179.1°179.9°
N21C22C23C24179.2°179.9°
N21C22C27C26178.9°179.9°
N21C22C27H181.1°0.1°
C22C23C24C250.1°0.0°
C23C22C27C260.0°0.1°
C22C23C24H16179.9°180.0°
C23C22C27H18179.9°179.9°
C23C22N21H40180.0°179.8°
C24C23C22C270.1°0.0°
C23C24C25H16180.0°180.0°
C23C24C25C260.1°0.0°
C23C24C25H17179.9°180.0°
C22C27C26H18180.0°180.0°
C22C27C26C250.0°0.1°
C22C27C26O28179.8°180.0°
C27C22N21H401.0°0.3°
C24C25C26C270.0°0.0°
C24C25C26H17180.0°180.0°
C24C25C26O28179.7°180.0°
C27C26C25O28179.8°180.0°
C27C26O28C29178.5°180.0°
C27C26C25H17180.0°179.9°
C25C26O28C291.3°0.0°
C26C25C24H16179.9°180.0°
C25C26C27H18180.0°179.9°
O28C26C25H170.3°0.0°
O28C26C27H180.2°0.0°
C26O28C29H19180.0°60.1°
C26O28C29H2060.0°180.0°
C26O28C29H2160.0°60.0°
O28C29H19H20120.0°120.0°
O28C29H19H21120.0°120.0°
O28C29H20H21120.0°120.0°
H1C4C3H2178.4°180.0°
H1C4C5H33174.9°179.9°
H1C4C5H3464.6°60.1°
H2C3C16H12177.6°180.0°
H3C1H4H5120.0°120.0°
H6C10C9H3841.7°48.4°
H6C10C9H3977.4°168.8°
H7C10C9H38161.6°72.1°
H7C10C9H3942.5°48.2°
H8C13C14H963.4°54.6°
H8C13C14H1056.5°65.1°
H9C14C15H1161.6°177.0°
H10C14C15H11178.5°57.3°
H11C15C16H1252.9°60.3°
H11C15C6H3556.0°59.9°
H13C20H14H15120.0°120.0°
H16C24C25H170.1°0.0°
H19C29H20H21120.0°120.0°
H24C40H25H26120.0°120.0°
H27C42H28H29120.0°119.9°
H30C44H31H32120.0°120.1°
H33C5C6H35175.5°179.1°
H34C5C6H3564.0°59.1°
H35C6C7H3670.2°58.4°
H35C6C7H3748.8°61.2°

222415

PDB entries from 2024-07-10

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