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YGR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C29O28sing1.43Å1.43Å
O28C27sing1.36Å1.42Å
C16O15sing1.43Å1.42Å
O15C14sing1.36Å1.42Å
C27N30doub1.32Å1.34ÅAromatic
C27C26sing1.39Å1.42ÅAromatic
N30C31sing1.32Å1.33ÅAromatic
C26C25doub1.39Å1.41ÅAromatic
C14N13doub1.32Å1.33ÅAromatic
C14C17sing1.39Å1.41ÅAromatic
C33O32sing1.43Å1.43Å
N13C10sing1.32Å1.33ÅAromatic
C17C06doub1.39Å1.40ÅAromatic
C31O32sing1.36Å1.43Å
C31C34doub1.39Å1.43ÅAromatic
C25C34sing1.39Å1.41ÅAromatic
C25C18sing1.51Å1.54Å
O24C18sing1.43Å1.41Å
C12O11sing1.43Å1.41Å
C10O11sing1.36Å1.41Å
C10C07doub1.39Å1.40ÅAromatic
C06C07sing1.39Å1.41ÅAromatic
C06C05sing1.51Å1.55Å
C18C05sing1.53Å1.52Å
C18C19sing1.53Å1.56Å
C20C19sing1.53Å1.57Å
C20N21sing1.47Å1.47Å
C07O08sing1.36Å1.41Å
C05C04sing1.51Å1.56Å
C22N21sing1.47Å1.43Å
C35C04doub1.36Å1.39ÅAromatic
C35C36sing1.41Å1.45ÅAromatic
C37C36doub1.40Å1.42ÅAromatic
C37C38sing1.36Å1.40ÅAromatic
BR3C38sing1.89Å1.93Å
N21C23sing1.47Å1.47Å
C04C03sing1.40Å1.43ÅAromatic
C36C42sing1.42Å1.37ÅAromatic
O08C09sing1.43Å1.41Å
C38C40doub1.39Å1.40ÅAromatic
C03O02sing1.36Å1.42Å
C03N43doub1.32Å1.33ÅAromatic
C42N43sing1.34Å1.38ÅAromatic
C42C41doub1.41Å1.43ÅAromatic
C40C41sing1.36Å1.39ÅAromatic
O02C01sing1.43Å1.43Å
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C05H4sing1.09Å1.10Å
C09H5sing1.09Å1.10Å
C09H6sing1.09Å1.10Å
C09H7sing1.09Å1.10Å
C12H8sing1.09Å1.10Å
C12H9sing1.09Å1.10Å
C12H10sing1.09Å1.10Å
C16H11sing1.09Å1.10Å
C16H12sing1.09Å1.10Å
C16H13sing1.09Å1.10Å
C17H14sing1.08Å1.08Å
C19H15sing1.09Å1.10Å
C19H16sing1.09Å1.10Å
C20H17sing1.09Å1.10Å
C20H18sing1.09Å1.10Å
C22H19sing1.09Å1.10Å
C22H20sing1.09Å1.10Å
C22H21sing1.09Å1.10Å
C23H22sing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C23H24sing1.09Å1.10Å
C26H25sing1.08Å1.08Å
C29H26sing1.09Å1.10Å
C29H27sing1.09Å1.10Å
C29H28sing1.09Å1.10Å
C33H29sing1.09Å1.10Å
C33H30sing1.09Å1.10Å
C33H31sing1.09Å1.10Å
C34H32sing1.08Å1.08Å
C35H33sing1.08Å1.08Å
C37H34sing1.08Å1.08Å
C40H35sing1.08Å1.08Å
C41H36sing1.08Å1.08Å
O24H38sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C29O28C27114.5°117.0°
O28C29H26109.5°109.5°
O28C29H27109.5°109.4°
O28C29H28109.5°109.5°
O28C27N30120.2°119.7°
O28C27C26120.2°119.7°
C16O15C14114.4°117.0°
O15C16H11109.5°109.5°
O15C16H12109.5°109.5°
O15C16H13109.5°109.5°
O15C14N13119.7°119.6°
O15C14C17119.3°119.6°
N30C27C26119.5°120.7°
C27N30C31123.0°121.6°
C27C26C25119.9°119.2°
C27C26H25120.0°120.4°
N30C31O32119.3°119.7°
N30C31C34120.5°120.7°
C26C25C34118.3°118.6°
C26C25C18120.1°120.7°
C25C26H25120.1°120.4°
N13C14C17121.0°120.8°
C14N13C10121.5°121.6°
C14C17C06119.4°119.3°
C14C17H14120.3°120.4°
C33O32C31113.7°117.0°
O32C33H29109.5°109.5°
O32C33H30109.5°109.5°
O32C33H31109.5°109.5°
N13C10O11119.3°119.7°
N13C10C07121.2°120.6°
C17C06C07117.8°118.5°
C17C06C05123.5°120.7°
C06C17H14120.3°120.4°
O32C31C34120.2°119.7°
C31C34C25118.8°119.2°
C31C34H32120.6°120.3°
C34C25C18121.6°120.7°
C25C34H32120.6°120.4°
C25C18O24109.1°109.5°
C25C18C05111.8°109.4°
C25C18C19109.5°109.5°
O24C18C05109.5°109.5°
O24C18C19109.2°109.5°
C18O24H38109.5°114.0°
C12O11C10113.9°117.0°
O11C12H8109.5°109.5°
O11C12H9109.5°109.4°
O11C12H10109.5°109.5°
O11C10C07119.5°119.7°
C10C07C06119.2°119.2°
C10C07O08119.9°120.4°
C07C06C05118.7°120.8°
C06C07O08120.9°120.4°
C06C05C18115.1°109.5°
C06C05C04107.5°109.5°
C06C05H4108.2°109.5°
C05C18C19107.7°109.5°
C18C05C04109.3°109.4°
C18C05H4108.5°109.5°
C18C19C20114.5°109.4°
C18C19H15108.2°109.4°
C18C19H16108.2°109.5°
C19C20N21109.1°109.5°
C20C19H15108.2°109.5°
C20C19H16108.2°109.5°
C19C20H17109.6°109.5°
C19C20H18109.6°109.5°
C20N21C22110.0°111.0°
C20N21C23110.0°111.0°
N21C20H17109.6°109.5°
N21C20H18109.6°109.4°
C07O08C09115.5°117.0°
C05C04C35120.2°120.1°
C05C04C03119.8°120.0°
C04C05H4108.0°109.5°
C22N21C23109.5°111.0°
N21C22H19109.5°109.5°
N21C22H20109.4°109.5°
N21C22H21109.5°109.5°
C04C35C36118.2°118.2°
C35C04C03120.0°119.9°
C04C35H33120.9°120.9°
C35C36C37121.3°121.2°
C35C36C42118.6°119.1°
C36C35H33120.9°120.9°
C36C37C38120.0°119.6°
C37C36C42120.1°119.7°
C36C37H34120.0°120.2°
C37C38BR3119.9°119.6°
C37C38C40120.1°120.8°
C38C37H34120.0°120.2°
BR3C38C40120.0°119.6°
N21C23H22109.5°109.5°
N21C23H23109.4°109.4°
N21C23H24109.5°109.5°
C04C03O02119.7°119.3°
C04C03N43120.1°121.6°
C36C42N43121.6°119.9°
C36C42C41120.0°119.1°
O08C09H5109.5°109.5°
O08C09H6109.5°109.5°
O08C09H7109.5°109.4°
C38C40C41120.0°121.1°
C38C40H35120.0°119.4°
O02C03N43120.2°119.2°
C03O02C01114.2°117.0°
C03N43C42121.4°121.3°
N43C42C41118.4°121.0°
C42C41C40119.9°119.7°
C42C41H36120.1°120.1°
C41C40H35120.0°119.5°
C40C41H36120.0°120.1°
O02C01H1109.5°109.5°
O02C01H2109.5°109.4°
O02C01H3109.5°109.5°
H1C01H2109.5°109.4°
H1C01H3109.4°109.5°
H2C01H3109.4°109.5°
H5C09H6109.4°109.5°
H5C09H7109.5°109.5°
H6C09H7109.5°109.4°
H8C12H9109.4°109.5°
H8C12H10109.4°109.5°
H9C12H10109.5°109.5°
H11C16H12109.5°109.5°
H11C16H13109.4°109.5°
H12C16H13109.5°109.4°
H15C19H16109.5°109.5°
H17C20H18109.4°109.5°
H19C22H20109.5°109.5°
H19C22H21109.4°109.5°
H20C22H21109.5°109.5°
H22C23H23109.4°109.5°
H22C23H24109.5°109.4°
H23C23H24109.5°109.5°
H26C29H27109.4°109.4°
H26C29H28109.5°109.5°
H27C29H28109.5°109.5°
H29C33H30109.5°109.5°
H29C33H31109.4°109.4°
H30C33H31109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C29O28C27N3031.6°0.0°
C29O28C27C26148.7°179.9°
O28C29H26H27120.0°119.9°
O28C29H26H28120.0°120.1°
O28C29H27H28120.0°120.0°
O28C27N30C26179.7°179.9°
O28C27N30C31179.9°179.7°
O28C27C26C25179.9°180.0°
O28C27C26H250.1°0.0°
C27O28C29H26180.0°180.0°
C27O28C29H2760.0°60.0°
C27O28C29H2860.0°60.0°
C16O15C14N135.8°0.0°
C16O15C14C17173.9°179.3°
O15C16H11H12120.0°120.0°
O15C16H11H13120.0°120.0°
O15C16H12H13120.0°120.0°
O15C14N13C17179.7°179.3°
O15C14N13C10180.0°180.0°
O15C14C17C06179.7°179.7°
C14O15C16H11180.0°180.0°
C14O15C16H1260.0°59.9°
C14O15C16H1360.0°60.0°
O15C14C17H140.3°0.8°
N30C27C26C250.1°0.0°
C27N30C31O32179.9°180.0°
C27N30C31C340.5°0.5°
N30C27C26H25179.9°180.0°
C26C27N30C310.3°0.3°
C27C26C25H25180.0°180.0°
C27C26C25C340.1°0.1°
C27C26C25C18179.4°179.7°
N30C31O32C334.8°0.5°
N30C31O32C34179.4°179.5°
N30C31C34C250.4°0.5°
N30C31C34H32179.6°179.4°
C26C25C34C310.2°0.2°
C26C25C34C18179.3°179.8°
C26C25C18O244.6°149.7°
C26C25C18C05125.8°29.8°
C26C25C18C19114.9°90.3°
C26C25C34H32179.8°179.7°
N13C14C17C060.6°0.5°
C14N13C10O11179.9°179.5°
C14N13C10C070.0°0.5°
N13C14C17H14179.4°180.0°
C17C14N13C100.3°0.7°
C14C17C06H14180.0°179.5°
C14C17C06C070.6°0.0°
C14C17C06C05179.9°179.8°
C33O32C31C34174.7°180.0°
O32C33H29H30120.0°120.1°
O32C33H29H31120.0°120.0°
O32C33H30H31120.0°120.1°
N13C10O11C1254.1°0.1°
N13C10O11C07179.9°180.0°
N13C10C07C060.0°0.0°
N13C10C07O08179.4°180.0°
C17C06C07C100.3°0.3°
C17C06C07C05179.5°179.7°
C17C06C05C1817.2°59.8°
C17C06C07O08179.1°179.7°
C17C06C05C04104.9°60.1°
C17C06C05H4138.6°179.9°
O32C31C34C25179.9°180.0°
C31O32C33H29180.0°180.0°
C31O32C33H3060.0°60.0°
C31O32C33H3160.0°60.0°
O32C31C34H320.1°0.0°
C31C34C25H32180.0°180.0°
C31C34C25C18179.6°180.0°
C34C25C18O24174.7°30.0°
C34C25C18C0553.5°150.0°
C34C25C18C1965.8°89.9°
C34C25C26H25179.9°180.0°
C25C18O24C05122.6°119.9°
C25C18O24C19119.7°120.0°
C25C18C05C0651.8°53.5°
C25C18C05C19120.4°120.0°
C25C18C19C2045.5°172.9°
C25C18C05C04172.9°173.5°
C25C18C05H469.5°66.5°
C25C18C19H15166.3°67.1°
C25C18C19H1675.2°52.9°
C18C25C26H250.6°0.3°
C18C25C34H320.4°0.0°
C25C18O24H38180.0°47.7°
O24C18C05C0669.2°66.5°
O24C18C05C19118.6°120.0°
O24C18C19C2073.8°52.9°
O24C18C05C0452.0°53.5°
O24C18C05H4169.5°173.5°
O24C18C19H1546.9°172.9°
O24C18C19H16165.4°67.1°
C12O11C10C07126.0°180.0°
O11C12H8H9120.0°119.9°
O11C12H8H10120.0°120.1°
O11C12H9H10120.0°120.1°
O11C10C07C06179.9°180.0°
O11C10C07O080.5°0.0°
C10O11C12H8180.0°60.0°
C10O11C12H960.0°180.0°
C10O11C12H1060.0°60.0°
C10C07C06O08179.4°180.0°
C10C07C06C05179.8°180.0°
C10C07O08C0994.7°90.0°
C07C06C05C18163.4°120.4°
C07C06C05C0474.6°119.6°
C06C07O08C0985.9°90.0°
C07C06C05H441.9°0.4°
C07C06C17H14179.4°179.5°
C06C05C18C04121.1°120.0°
C06C05C18H4121.3°120.0°
C06C05C18C19172.2°173.5°
C05C06C07O080.4°0.0°
C06C05C04H4116.6°120.0°
C06C05C04C3540.6°65.5°
C06C05C04C03139.0°114.4°
C05C06C17H140.1°0.3°
C05C18C19C20167.4°67.1°
C18C05C04H4117.8°120.0°
C18C05C04C3585.0°54.5°
C18C05C04C0395.4°125.6°
C05C18C19H1571.9°52.9°
C05C18C19H1646.6°172.9°
C05C18O24H3857.4°72.2°
C18C19C20H15120.7°119.9°
C18C19C20H16120.7°120.0°
C18C19C20N21165.5°172.6°
C19C18C05C0466.7°66.5°
C19C18C05H450.9°53.5°
C18C19H15H16117.7°120.0°
C18C19C20H1774.5°52.6°
C18C19C20H1845.5°67.5°
C19C18O24H3860.3°167.7°
C19C20N21H17120.0°120.0°
C19C20N21H18120.0°120.0°
C19C20N21C22173.1°66.0°
C19C20N21C2366.2°170.0°
C20C19H15H16117.7°120.1°
C19C20H17H18120.2°120.0°
C20N21C22C23121.0°123.9°
N21C20C19H1544.8°67.5°
N21C20C19H1673.8°52.6°
N21C20H17H18120.1°120.0°
C20N21C22H19180.0°60.0°
C20N21C22H2060.0°180.0°
C20N21C22H2160.0°60.0°
C20N21C23H22180.0°60.0°
C20N21C23H2360.0°180.0°
C20N21C23H2460.0°60.0°
C07O08C09H5180.0°180.0°
C07O08C09H660.0°60.0°
C07O08C09H760.0°60.0°
C05C04C35C03179.6°179.9°
C05C04C35C36180.0°180.0°
C05C04C03O020.5°0.1°
C05C04C03N43179.8°179.7°
C05C04C35H330.0°0.1°
C22N21C20H1767.0°54.0°
C22N21C20H1853.1°174.0°
N21C22H19H20120.0°120.0°
N21C22H19H21120.0°120.0°
N21C22H20H21120.0°120.0°
C22N21C23H2259.0°176.1°
C22N21C23H23179.0°56.0°
C22N21C23H2461.0°63.9°
C04C35C36H33180.0°179.9°
C04C35C36C37179.9°180.0°
C04C35C36C420.2°0.0°
C35C04C03O02179.9°180.0°
C35C04C03N430.6°0.2°
C35C04C05H4157.2°174.5°
C35C36C37C42179.9°180.0°
C35C36C37C38179.9°179.9°
C36C35C04C030.4°0.1°
C35C36C42N430.1°0.3°
C35C36C42C41179.9°179.9°
C35C36C37H340.1°0.0°
C36C37C38H34180.0°179.9°
C36C37C38BR3180.0°180.0°
C36C37C38C400.0°0.1°
C37C36C42N43180.0°179.7°
C37C36C42C410.0°0.1°
C37C36C35H330.1°0.0°
C37C38BR3C40180.0°179.9°
C38C37C36C420.0°0.1°
C37C38C40C410.1°0.1°
C37C38C40H35179.9°179.9°
BR3C38C40C41180.0°180.0°
BR3C38C37H340.0°0.1°
BR3C38C40H350.0°0.0°
C23N21C20H1753.8°70.0°
C23N21C20H18173.8°50.0°
C23N21C22H1959.0°64.0°
C23N21C22H2061.0°56.1°
C23N21C22H21179.0°176.1°
N21C23H22H23120.0°120.0°
N21C23H22H24120.0°120.0°
N21C23H23H24120.0°120.0°
C04C03O02N43179.3°179.8°
C04C03N43C420.5°0.5°
C04C03O02C01172.4°179.8°
C03C04C05H422.4°5.6°
C03C04C35H33179.6°180.0°
C36C42N43C030.3°0.6°
C36C42N43C41180.0°179.6°
C36C42C41C400.0°0.1°
C42C36C35H33179.8°180.0°
C42C36C37H34180.0°180.0°
C36C42C41H36180.0°180.0°
O08C09H5H6120.0°120.0°
O08C09H5H7120.0°120.0°
O08C09H6H7120.0°119.9°
C38C40C41C420.1°0.1°
C38C40C41H35180.0°180.0°
C40C38C37H34179.9°180.0°
C38C40C41H36179.9°180.0°
O02C03N43C42179.8°179.7°
C03O02C01H1180.0°60.0°
C03O02C01H260.0°60.0°
C03O02C01H360.0°180.0°
C03N43C42C41179.7°179.8°
N43C03O02C017.0°0.0°
N43C42C41C40179.9°179.7°
N43C42C41H360.1°0.4°
C42C41C40H36180.0°179.9°
C42C41C40H35179.9°179.9°
O02C01H1H2120.0°120.0°
O02C01H1H3120.0°120.1°
O02C01H2H3120.0°120.1°
H1C01H2H3119.9°120.0°
H5C09H6H7120.0°120.0°
H8C12H9H10120.0°120.0°
H11C16H12H13120.0°120.0°
H15C19C20H17164.7°172.5°
H15C19C20H1875.2°52.5°
H16C19C20H1746.2°67.4°
H16C19C20H18166.3°172.5°
H19C22H20H21120.0°120.0°
H22C23H23H24120.0°120.0°
H26C29H27H28120.0°120.0°
H29C33H30H31120.0°119.9°
H35C40C41H360.1°0.0°

221051

PDB entries from 2024-06-12

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