YGL
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CAK | CAG | sing | 1.38Å | 1.39Å | Aromatic |
CAK | CAR | doub | 1.40Å | 1.42Å | Aromatic |
CAG | CAD | doub | 1.38Å | 1.39Å | Aromatic |
CAD | CAH | sing | 1.38Å | 1.39Å | Aromatic |
CAH | CAL | doub | 1.38Å | 1.40Å | Aromatic |
CAL | CAR | sing | 1.40Å | 1.40Å | Aromatic |
CAR | CAT | sing | 1.48Å | 1.37Å | |
CAT | CAW | sing | 1.47Å | 1.40Å | Aromatic |
CAT | CAS | doub | 1.38Å | 1.38Å | Aromatic |
CAW | CAU | sing | 1.41Å | 1.38Å | |
CAW | CAV | doub | 1.40Å | 1.38Å | Aromatic |
CAU | OAB | doub | 1.22Å | 1.24Å | |
CAU | NAN | sing | 1.35Å | 1.41Å | |
NAN | CAP | sing | 1.36Å | 1.42Å | |
CAP | NAA | sing | 1.37Å | 1.35Å | |
CAP | NAM | doub | 1.31Å | 1.35Å | |
NAM | CAV | sing | 1.34Å | 1.35Å | |
CAV | NAO | sing | 1.37Å | 1.34Å | Aromatic |
NAO | CAS | sing | 1.38Å | 1.34Å | Aromatic |
CAS | CAQ | sing | 1.48Å | 1.39Å | |
CAQ | CAI | sing | 1.40Å | 1.41Å | Aromatic |
CAQ | CAJ | doub | 1.40Å | 1.40Å | Aromatic |
CAI | CAE | doub | 1.38Å | 1.39Å | Aromatic |
CAE | CAC | sing | 1.38Å | 1.40Å | Aromatic |
CAC | CAF | doub | 1.38Å | 1.39Å | Aromatic |
CAF | CAJ | sing | 1.38Å | 1.41Å | Aromatic |
CAK | HAK | sing | 1.08Å | 1.08Å | |
CAG | HAG | sing | 1.08Å | 1.08Å | |
CAD | HAD | sing | 1.08Å | 1.08Å | |
CAH | HAH | sing | 1.08Å | 1.08Å | |
CAL | HAL | sing | 1.08Å | 1.08Å | |
NAN | HAN | sing | 0.97Å | 1.00Å | |
NAA | HAA1 | sing | 0.97Å | 1.00Å | |
NAA | HAA2 | sing | 0.97Å | 1.00Å | |
NAO | HAO | sing | 0.97Å | 1.00Å | |
CAI | HAI | sing | 1.08Å | 1.08Å | |
CAJ | HAJ | sing | 1.08Å | 1.08Å | |
CAE | HAE | sing | 1.08Å | 1.08Å | |
CAC | HAC | sing | 1.08Å | 1.08Å | |
CAF | HAF | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CAG | CAK | CAR | 122.5° | 119.9° |
CAK | CAG | CAD | 119.5° | 120.1° |
CAG | CAK | HAK | 118.8° | 120.1° |
CAK | CAG | HAG | 120.3° | 120.0° |
CAK | CAR | CAL | 116.5° | 119.7° |
CAK | CAR | CAT | 119.1° | 120.2° |
CAR | CAK | HAK | 118.7° | 120.1° |
CAG | CAD | CAH | 119.4° | 120.3° |
CAD | CAG | HAG | 120.3° | 119.9° |
CAG | CAD | HAD | 120.3° | 119.8° |
CAD | CAH | CAL | 120.6° | 120.1° |
CAH | CAD | HAD | 120.3° | 119.9° |
CAD | CAH | HAH | 119.7° | 119.9° |
CAH | CAL | CAR | 121.5° | 119.9° |
CAL | CAH | HAH | 119.7° | 119.9° |
CAH | CAL | HAL | 119.3° | 120.1° |
CAL | CAR | CAT | 124.3° | 120.1° |
CAR | CAL | HAL | 119.2° | 120.1° |
CAR | CAT | CAW | 131.9° | 126.9° |
CAR | CAT | CAS | 119.5° | 126.9° |
CAW | CAT | CAS | 108.6° | 106.2° |
CAT | CAW | CAU | 137.5° | 134.2° |
CAT | CAW | CAV | 105.7° | 106.6° |
CAT | CAS | NAO | 106.1° | 108.9° |
CAT | CAS | CAQ | 130.6° | 125.5° |
CAU | CAW | CAV | 116.7° | 119.2° |
CAW | CAU | OAB | 124.6° | 120.9° |
CAW | CAU | NAN | 120.1° | 118.2° |
CAW | CAV | NAM | 124.2° | 119.1° |
CAW | CAV | NAO | 108.1° | 108.0° |
OAB | CAU | NAN | 115.3° | 120.9° |
CAU | NAN | CAP | 120.2° | 120.1° |
CAU | NAN | HAN | 119.9° | 119.9° |
NAN | CAP | NAA | 121.1° | 118.9° |
NAN | CAP | NAM | 117.8° | 122.1° |
CAP | NAN | HAN | 119.9° | 120.0° |
NAA | CAP | NAM | 121.1° | 119.0° |
CAP | NAA | HAA1 | 120.0° | 120.0° |
CAP | NAA | HAA2 | 120.0° | 120.0° |
CAP | NAM | CAV | 120.9° | 121.3° |
NAM | CAV | NAO | 127.6° | 133.0° |
CAV | NAO | CAS | 111.3° | 110.3° |
CAV | NAO | HAO | 124.3° | 124.8° |
NAO | CAS | CAQ | 123.1° | 125.6° |
CAS | NAO | HAO | 124.3° | 124.8° |
CAS | CAQ | CAI | 119.2° | 120.2° |
CAS | CAQ | CAJ | 126.1° | 120.2° |
CAI | CAQ | CAJ | 114.5° | 119.7° |
CAQ | CAI | CAE | 124.1° | 119.9° |
CAQ | CAI | HAI | 118.0° | 120.0° |
CAQ | CAJ | CAF | 122.6° | 119.8° |
CAQ | CAJ | HAJ | 118.7° | 120.1° |
CAI | CAE | CAC | 119.5° | 120.1° |
CAE | CAI | HAI | 118.0° | 120.1° |
CAI | CAE | HAE | 120.3° | 120.0° |
CAE | CAC | CAF | 118.6° | 120.4° |
CAC | CAE | HAE | 120.3° | 119.9° |
CAE | CAC | HAC | 120.7° | 119.8° |
CAC | CAF | CAJ | 120.7° | 120.1° |
CAF | CAC | HAC | 120.7° | 119.9° |
CAC | CAF | HAF | 119.7° | 119.9° |
CAF | CAJ | HAJ | 118.7° | 120.1° |
CAJ | CAF | HAF | 119.6° | 119.9° |
HAA1 | NAA | HAA2 | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CAG | CAK | CAR | HAK | 180.0° | 179.8° |
CAK | CAG | CAD | HAG | 180.0° | 179.9° |
CAK | CAG | CAD | CAH | 0.0° | 0.0° |
CAG | CAK | CAR | CAL | 2.2° | 0.0° |
CAG | CAK | CAR | CAT | 175.9° | 180.0° |
CAK | CAG | CAD | HAD | 179.9° | 180.0° |
CAR | CAK | CAG | CAD | 1.4° | 0.0° |
CAK | CAR | CAL | CAH | 1.5° | 0.1° |
CAK | CAR | CAL | CAT | 177.9° | 180.0° |
CAK | CAR | CAT | CAW | 132.0° | 66.5° |
CAK | CAR | CAT | CAS | 50.1° | 113.1° |
CAR | CAK | CAG | HAG | 178.6° | 179.9° |
CAK | CAR | CAL | HAL | 178.5° | 180.0° |
CAG | CAD | CAH | HAD | 180.0° | 180.0° |
CAG | CAD | CAH | CAL | 0.6° | 0.0° |
CAD | CAG | CAK | HAK | 178.6° | 179.8° |
CAG | CAD | CAH | HAH | 179.3° | 180.0° |
CAD | CAH | CAL | HAH | 180.0° | 180.0° |
CAD | CAH | CAL | CAR | 0.2° | 0.1° |
CAH | CAD | CAG | HAG | 179.9° | 179.9° |
CAD | CAH | CAL | HAL | 179.8° | 180.0° |
CAH | CAL | CAR | HAL | 180.0° | 179.9° |
CAH | CAL | CAR | CAT | 176.4° | 180.0° |
CAL | CAH | CAD | HAD | 179.3° | 180.0° |
CAL | CAR | CAT | CAW | 50.1° | 113.5° |
CAL | CAR | CAT | CAS | 127.7° | 66.8° |
CAL | CAR | CAK | HAK | 177.8° | 179.8° |
CAR | CAL | CAH | HAH | 179.8° | 180.0° |
CAR | CAT | CAW | CAS | 178.1° | 179.7° |
CAR | CAT | CAW | CAU | 1.3° | 0.1° |
CAR | CAT | CAW | CAV | 179.0° | 180.0° |
CAR | CAT | CAS | NAO | 179.7° | 179.9° |
CAR | CAT | CAS | CAQ | 4.2° | 0.0° |
CAT | CAR | CAK | HAK | 4.1° | 0.2° |
CAT | CAR | CAL | HAL | 3.6° | 0.0° |
CAT | CAW | CAU | CAV | 179.7° | 180.0° |
CAT | CAW | CAU | OAB | 1.1° | 0.1° |
CAT | CAW | CAU | NAN | 179.3° | 180.0° |
CAT | CAW | CAV | NAM | 178.3° | 180.0° |
CAT | CAW | CAV | NAO | 0.5° | 0.1° |
CAW | CAT | CAS | NAO | 1.9° | 0.4° |
CAW | CAT | CAS | CAQ | 177.5° | 179.7° |
CAS | CAT | CAW | CAU | 179.4° | 179.8° |
CAS | CAT | CAW | CAV | 0.9° | 0.3° |
CAT | CAS | NAO | CAV | 2.3° | 0.3° |
CAT | CAS | NAO | CAQ | 176.0° | 179.9° |
CAT | CAS | CAQ | CAI | 139.3° | 133.1° |
CAT | CAS | CAQ | CAJ | 36.0° | 47.1° |
CAT | CAS | NAO | HAO | 177.7° | 179.8° |
CAW | CAU | OAB | NAN | 179.7° | 180.0° |
CAW | CAU | NAN | CAP | 1.7° | 0.0° |
CAU | CAW | CAV | NAM | 1.4° | 0.1° |
CAU | CAW | CAV | NAO | 179.3° | 180.0° |
CAW | CAU | NAN | HAN | 178.4° | 180.0° |
CAV | CAW | CAU | OAB | 179.3° | 180.0° |
CAV | CAW | CAU | NAN | 0.4° | 0.0° |
CAW | CAV | NAM | CAP | 0.2° | 0.0° |
CAW | CAV | NAM | NAO | 177.4° | 179.9° |
CAW | CAV | NAO | CAS | 1.7° | 0.2° |
CAW | CAV | NAO | HAO | 178.3° | 180.0° |
OAB | CAU | NAN | CAP | 178.6° | 179.9° |
OAB | CAU | NAN | HAN | 1.4° | 0.0° |
CAU | NAN | CAP | HAN | 180.0° | 179.9° |
CAU | NAN | CAP | NAA | 178.9° | 180.0° |
CAU | NAN | CAP | NAM | 2.8° | 0.0° |
NAN | CAP | NAA | NAM | 178.2° | 179.9° |
NAN | CAP | NAM | CAV | 1.9° | 0.0° |
NAN | CAP | NAA | HAA1 | 178.2° | 0.1° |
NAN | CAP | NAA | HAA2 | 1.8° | 179.9° |
NAA | CAP | NAM | CAV | 179.8° | 179.9° |
NAA | CAP | NAN | HAN | 1.1° | 0.1° |
CAP | NAA | HAA1 | HAA2 | 180.0° | 180.0° |
CAP | NAM | CAV | NAO | 177.7° | 179.9° |
NAM | CAP | NAN | HAN | 177.2° | 180.0° |
NAM | CAP | NAA | HAA1 | 0.0° | 180.0° |
NAM | CAP | NAA | HAA2 | 180.0° | 0.0° |
NAM | CAV | NAO | CAS | 179.5° | 179.7° |
NAM | CAV | NAO | HAO | 0.5° | 0.1° |
CAV | NAO | CAS | HAO | 180.0° | 179.9° |
CAV | NAO | CAS | CAQ | 178.3° | 179.8° |
NAO | CAS | CAQ | CAI | 35.6° | 46.8° |
NAO | CAS | CAQ | CAJ | 149.1° | 133.0° |
CAS | CAQ | CAI | CAJ | 175.8° | 179.8° |
CAS | CAQ | CAI | CAE | 178.3° | 180.0° |
CAS | CAQ | CAJ | CAF | 177.3° | 179.7° |
CAQ | CAS | NAO | HAO | 1.8° | 0.1° |
CAS | CAQ | CAI | HAI | 1.7° | 0.0° |
CAS | CAQ | CAJ | HAJ | 2.7° | 0.0° |
CAQ | CAI | CAE | HAI | 180.0° | 180.0° |
CAQ | CAI | CAE | CAC | 3.0° | 0.0° |
CAI | CAQ | CAJ | CAF | 1.8° | 0.6° |
CAI | CAQ | CAJ | HAJ | 178.2° | 179.8° |
CAQ | CAI | CAE | HAE | 177.0° | 180.0° |
CAJ | CAQ | CAI | CAE | 2.5° | 0.2° |
CAQ | CAJ | CAF | CAC | 1.7° | 0.6° |
CAQ | CAJ | CAF | HAJ | 180.0° | 179.7° |
CAJ | CAQ | CAI | HAI | 177.5° | 179.7° |
CAQ | CAJ | CAF | HAF | 178.3° | 179.7° |
CAI | CAE | CAC | HAE | 180.0° | 180.0° |
CAI | CAE | CAC | CAF | 2.7° | 0.0° |
CAI | CAE | CAC | HAC | 177.3° | 180.0° |
CAE | CAC | CAF | HAC | 180.0° | 180.0° |
CAE | CAC | CAF | CAJ | 2.1° | 0.3° |
CAC | CAE | CAI | HAI | 176.9° | 180.0° |
CAE | CAC | CAF | HAF | 177.9° | 180.0° |
CAC | CAF | CAJ | HAF | 180.0° | 179.7° |
CAC | CAF | CAJ | HAJ | 178.3° | 179.7° |
CAF | CAC | CAE | HAE | 177.3° | 180.0° |
CAJ | CAF | CAC | HAC | 177.9° | 179.7° |
HAK | CAK | CAG | HAG | 1.4° | 0.3° |
HAG | CAG | CAD | HAD | 0.1° | 0.1° |
HAD | CAD | CAH | HAH | 0.7° | 0.0° |
HAH | CAH | CAL | HAL | 0.2° | 0.0° |
HAI | CAI | CAE | HAE | 3.1° | 0.0° |
HAJ | CAJ | CAF | HAF | 1.7° | 0.0° |
HAE | CAE | CAC | HAC | 2.7° | 0.0° |
HAC | CAC | CAF | HAF | 2.1° | 0.0° |