Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

YDW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OAXCAWdoub1.22Å1.20Å
CAWCAUsing1.48Å1.56Å
CAWNAYsing1.35Å1.45Å
CAZNAYsing1.46Å1.47Å
CATCAUdoub1.40Å1.40ÅAromatic
CATCASsing1.38Å1.39ÅAromatic
CAUCAVsing1.40Å1.38ÅAromatic
CASCARdoub1.38Å1.40ÅAromatic
CAVCAQdoub1.38Å1.39ÅAromatic
CARCAQsing1.38Å1.40ÅAromatic
CAQCAPsing1.51Å1.56Å
CAPNANsing1.47Å1.46Å
CAMNANsing1.36Å1.33Å
CAMCALdoub1.34Å1.40Å
NANCAOsing1.35Å1.32Å
CALCAHsing1.46Å1.44Å
CAOOBEdoub1.22Å1.39Å
CAOCAIsing1.47Å1.44Å
CAHCAIdoub1.42Å1.36ÅAromatic
CAHCAGsing1.39Å1.42ÅAromatic
CAICAJsing1.40Å1.43ÅAromatic
CAGCAFdoub1.39Å1.39ÅAromatic
FBDCBAsing1.40Å1.35Å
CAJCAKdoub1.36Å1.39ÅAromatic
CAFCAKsing1.40Å1.39ÅAromatic
CAFCADsing1.48Å1.52Å
FBBCBAsing1.40Å1.38Å
CBAFBCsing1.40Å1.37Å
CBACAEsing1.51Å1.52Å
CADCAEdoub1.37Å1.41ÅAromatic
CADCACsing1.41Å1.41ÅAromatic
CAENAAsing1.35Å1.31ÅAromatic
CACNABdoub1.31Å1.31ÅAromatic
NAANABsing1.40Å1.32ÅAromatic
CACH1sing1.08Å1.08Å
CAGH2sing1.08Å1.08Å
CAJH3sing1.08Å1.08Å
CAKH4sing1.08Å1.08Å
CALH5sing1.08Å1.08Å
CAMH6sing1.08Å1.08Å
CAPH7sing1.09Å1.10Å
CAPH8sing1.09Å1.10Å
CARH9sing1.08Å1.08Å
CASH10sing1.08Å1.08Å
CATH11sing1.08Å1.08Å
CAVH12sing1.08Å1.08Å
CAZH13sing1.09Å1.10Å
CAZH14sing1.09Å1.10Å
CAZH15sing1.09Å1.10Å
NAAH16sing0.97Å1.00Å
NAYH17sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OAXCAWCAU120.3°120.0°
OAXCAWNAY119.1°120.0°
CAUCAWNAY120.6°120.0°
CAWCAUCAT121.1°120.1°
CAWCAUCAV118.8°120.1°
CAWNAYCAZ117.5°120.0°
CAWNAYH17121.3°120.0°
NAYCAZH13109.5°109.5°
NAYCAZH14109.5°109.5°
NAYCAZH15109.5°109.5°
CAZNAYH17121.2°120.0°
CAUCATCAS120.0°119.8°
CATCAUCAV120.1°119.7°
CAUCATH11120.0°120.1°
CATCASCAR119.8°120.1°
CATCASH10120.1°119.9°
CASCATH11120.0°120.1°
CAUCAVCAQ120.3°119.8°
CAUCAVH12119.8°120.1°
CASCARCAQ119.8°120.3°
CASCARH9120.1°119.8°
CARCASH10120.1°119.9°
CAVCAQCAR120.0°120.2°
CAVCAQCAP118.8°119.9°
CAQCAVH12119.9°120.1°
CARCAQCAP121.2°120.0°
CAQCARH9120.1°119.9°
CAQCAPNAN109.6°109.5°
CAQCAPH7109.4°109.5°
CAQCAPH8109.4°109.5°
CAPNANCAM121.8°118.8°
CAPNANCAO116.0°118.8°
NANCAPH7109.4°109.5°
NANCAPH8109.4°109.4°
NANCAMCAL120.3°122.4°
CAMNANCAO122.2°122.3°
NANCAMH6119.8°118.8°
CAMCALCAH119.3°119.4°
CAMCALH5120.3°120.3°
CALCAMH6119.8°118.8°
NANCAOOBE116.4°120.4°
NANCAOCAI120.9°119.3°
CALCAHCAI118.2°118.4°
CALCAHCAG121.8°121.9°
CAHCALH5120.3°120.3°
OBECAOCAI122.7°120.3°
CAOCAICAH119.0°118.2°
CAOCAICAJ121.6°121.9°
CAICAHCAG120.0°119.7°
CAHCAICAJ119.5°119.9°
CAHCAGCAF121.0°119.3°
CAHCAGH2119.5°120.3°
CAICAJCAK119.9°119.8°
CAICAJH3120.0°120.1°
CAGCAFCAK119.0°120.5°
CAGCAFCAD123.4°119.8°
CAFCAGH2119.5°120.4°
FBDCBAFBB109.5°109.5°
FBDCBAFBC109.4°109.4°
FBDCBACAE110.6°109.5°
CAJCAKCAF120.7°120.8°
CAKCAJH3120.1°120.1°
CAJCAKH4119.7°119.7°
CAKCAFCAD117.6°119.8°
CAFCAKH4119.7°119.6°
CAFCADCAE132.5°126.2°
CAFCADCAC124.4°126.3°
FBBCBAFBC111.5°109.5°
FBBCBACAE109.2°109.5°
FBCCBACAE106.6°109.5°
CBACAECAD129.5°126.2°
CBACAENAA121.7°126.2°
CAECADCAC103.2°107.6°
CADCAENAA108.8°107.6°
CADCACNAB107.9°108.1°
CADCACH1126.1°126.0°
CAENAANAB109.2°108.3°
CAENAAH16125.4°125.9°
CACNABNAA110.9°108.5°
NABCACH1126.0°125.9°
NABNAAH16125.4°125.9°
H7CAPH8109.5°109.5°
H13CAZH14109.4°109.5°
H13CAZH15109.4°109.4°
H14CAZH15109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OAXCAWCAUNAY179.3°180.0°
OAXCAWNAYCAZ0.3°0.0°
OAXCAWCAUCAT41.9°180.0°
OAXCAWCAUCAV136.6°0.2°
OAXCAWNAYH17179.7°180.0°
CAUCAWNAYCAZ179.0°180.0°
CAWCAUCATCAV178.5°179.8°
CAWCAUCATCAS179.1°179.9°
CAWCAUCAVCAQ179.2°179.7°
CAWCAUCATH110.8°0.3°
CAWCAUCAVH120.8°0.2°
CAUCAWNAYH171.0°0.0°
CAWNAYCAZH17180.0°180.0°
NAYCAWCAUCAT138.8°0.0°
NAYCAWCAUCAV42.7°179.8°
CAWNAYCAZH13180.0°60.0°
CAWNAYCAZH1460.0°180.0°
CAWNAYCAZH1560.0°59.9°
NAYCAZH13H14120.0°120.1°
NAYCAZH13H15120.0°120.0°
NAYCAZH14H15120.0°120.0°
CAUCATCASH11180.0°179.6°
CAUCATCASCAR0.3°0.1°
CATCAUCAVCAQ0.6°0.6°
CAUCATCASH10179.7°180.0°
CATCAUCAVH12179.4°180.0°
CASCATCAUCAV0.6°0.3°
CATCASCARH10180.0°179.9°
CATCASCARCAQ0.1°0.1°
CATCASCARH9180.0°179.9°
CAUCAVCAQH12180.0°179.4°
CAUCAVCAQCAR0.4°0.6°
CAUCAVCAQCAP180.0°179.7°
CAVCAUCATH11179.4°180.0°
CASCARCAQCAV0.1°0.4°
CASCARCAQH9180.0°179.9°
CASCARCAQCAP179.7°180.0°
CARCASCATH11179.7°179.7°
CAVCAQCARCAP179.6°179.7°
CAVCAQCAPNAN152.6°90.3°
CAVCAQCAPH732.6°29.7°
CAVCAQCAPH887.4°149.7°
CAVCAQCARH9179.9°179.7°
CARCAQCAPNAN27.9°90.0°
CARCAQCAPH7147.8°150.0°
CARCAQCAPH892.2°29.9°
CAQCARCASH10179.9°179.9°
CARCAQCAVH12179.6°179.9°
CAQCAPNANH7120.0°120.0°
CAQCAPNANH8120.0°120.0°
CAQCAPNANCAM103.2°90.0°
CAQCAPNANCAO77.7°90.0°
CAQCAPH7H8119.9°120.0°
CAPCAQCARH90.4°0.0°
CAPCAQCAVH120.1°0.3°
CAPNANCAMCAO179.1°180.0°
CAPNANCAMCAL178.9°179.9°
CAPNANCAOOBE1.1°0.0°
CAPNANCAOCAI179.1°180.0°
CAPNANCAMH61.1°0.1°
NANCAPH7H8120.0°119.9°
NANCAMCALH6180.0°179.9°
NANCAMCALCAH0.3°0.1°
CAMNANCAOOBE179.7°180.0°
CAMNANCAOCAI0.0°0.0°
NANCAMCALH5179.7°180.0°
CAMNANCAPH7136.8°30.1°
CAMNANCAPH816.8°150.0°
CALCAMNANCAO0.1°0.1°
CAMCALCAHH5180.0°179.9°
CAMCALCAHCAI0.3°0.0°
CAMCALCAHCAG179.7°180.0°
NANCAOOBECAI179.8°179.9°
NANCAOCAICAH0.1°0.1°
NANCAOCAICAJ180.0°180.0°
CAONANCAMH6179.9°180.0°
CAONANCAPH742.3°150.0°
CAONANCAPH8162.3°30.0°
CALCAHCAICAO0.2°0.1°
CALCAHCAICAG179.9°180.0°
CALCAHCAICAJ179.9°180.0°
CALCAHCAGCAF179.7°180.0°
CALCAHCAGH20.3°0.0°
CAHCALCAMH6179.7°180.0°
OBECAOCAICAH179.7°180.0°
OBECAOCAICAJ0.2°0.1°
CAOCAICAHCAJ179.9°179.9°
CAOCAICAHCAG179.8°180.0°
CAOCAICAJCAK179.1°179.9°
CAOCAICAJH30.9°0.0°
CAICAHCAGCAF0.4°0.1°
CAHCAICAJCAK0.8°0.0°
CAICAHCAGH2179.6°180.0°
CAHCAICAJH3179.2°179.9°
CAICAHCALH5179.7°179.9°
CAGCAHCAICAJ0.1°0.1°
CAHCAGCAFH2180.0°180.0°
CAHCAGCAFCAK0.1°0.1°
CAHCAGCAFCAD179.5°179.7°
CAGCAHCALH50.3°0.0°
CAICAJCAKH3180.0°180.0°
CAICAJCAKCAF1.0°0.1°
CAICAJCAKH4179.0°179.8°
CAGCAFCAKCAJ0.6°0.1°
CAGCAFCAKCAD179.7°179.6°
CAGCAFCADCAE0.5°130.3°
CAGCAFCADCAC179.6°49.6°
CAGCAFCAKH4179.4°179.8°
FBDCBAFBBFBC121.2°120.0°
FBDCBAFBBCAE121.2°120.0°
FBDCBAFBCCAE119.7°120.0°
FBDCBACAECAD53.1°60.1°
FBDCBACAENAA128.4°120.0°
CAJCAKCAFH4180.0°179.8°
CAJCAKCAFCAD179.8°179.7°
CAKCAFCADCAE179.2°50.1°
CAKCAFCADCAC0.8°130.0°
CAKCAFCAGH2179.8°180.0°
CAFCAKCAJH3179.0°179.9°
CAFCADCAECBA1.2°0.1°
CAFCADCAECAC180.0°179.9°
CAFCADCAENAA179.8°180.0°
CAFCADCACNAB179.9°180.0°
CAFCADCACH10.1°0.3°
CADCAFCAGH20.5°0.3°
CADCAFCAKH40.2°0.2°
FBBCBAFBCCAE119.1°120.0°
FBBCBACAECAD67.4°59.9°
FBBCBACAENAA111.1°119.9°
FBCCBACAECAD172.0°180.0°
FBCCBACAENAA9.5°0.1°
CBACAECADNAA178.6°179.9°
CBACAECADCAC178.8°180.0°
CBACAENAANAB179.0°179.9°
CBACAENAAH161.0°0.1°
CAECADCACNAB0.1°0.1°
CADCAENAANAB0.2°0.0°
CAECADCACH1179.9°179.8°
CADCAENAAH16179.8°180.0°
CACCADCAENAA0.2°0.1°
CADCACNABH1180.0°179.7°
CADCACNABNAA0.0°0.1°
CAENAANABCAC0.1°0.0°
CAENAANABH16180.0°180.0°
CACNABNAAH16179.9°180.0°
NAANABCACH1180.0°179.7°
H3CAJCAKH41.0°0.2°
H5CALCAMH60.3°0.1°
H9CARCASH100.0°0.0°
H10CASCATH110.3°0.3°
H13CAZH14H15120.0°119.9°
H13CAZNAYH170.0°120.0°
H14CAZNAYH17120.0°0.0°
H15CAZNAYH17120.0°120.0°

251801

PDB entries from 2026-04-08

PDB statisticsPDBj update infoContact PDBjnumon