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YD3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3C22doub1.22Å1.23Å
C22N3sing1.35Å1.35Å
C22C23sing1.41Å1.45Å
N3C21sing1.38Å1.39Å
C23C24sing1.51Å1.51Å
C23C25doub1.36Å1.37Å
C25C26sing1.42Å1.45Å
C26C6doub1.41Å1.40ÅAromatic
C26C21sing1.40Å1.41ÅAromatic
C6C4sing1.48Å1.49Å
C6C7sing1.39Å1.39ÅAromatic
C4C3sing1.39Å1.39ÅAromatic
C4C5doub1.40Å1.39ÅAromatic
C3Ndoub1.32Å1.34ÅAromatic
NC2sing1.32Å1.34ÅAromatic
C2C1doub1.38Å1.39ÅAromatic
C5C1sing1.38Å1.39ÅAromatic
C1Csing1.51Å1.51Å
C21C9doub1.40Å1.41ÅAromatic
C9C8sing1.39Å1.40ÅAromatic
C9N1sing1.40Å1.39Å
C8C7doub1.38Å1.38ÅAromatic
N1C10sing1.47Å1.46Å
C10C14sing1.53Å1.52Å
C10C11sing1.53Å1.53Å
C14C13sing1.53Å1.53Å
C14Osing1.43Å1.43Å
C13N2sing1.47Å1.46Å
N2C12sing1.47Å1.47Å
C12C11sing1.53Å1.51Å
OC15sing1.43Å1.43Å
C15C16sing1.53Å1.51Å
C16C20sing1.53Å1.53Å
C16C17sing1.53Å1.52Å
C20C19sing1.53Å1.53Å
C19Ssing1.82Å1.77Å
SO1doub1.42Å1.44Å
SO2doub1.42Å1.44Å
SC18sing1.82Å1.76Å
C18C17sing1.53Å1.52Å
N3H3sing0.97Å1.00Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C24H243sing1.09Å1.10Å
C25H25sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C3HAsing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
CHC1sing1.09Å1.10Å
CHC2sing1.09Å1.10Å
CHC3sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
N1H1sing0.97Å1.00Å
C10H10sing1.09Å1.10Å
C14H14sing1.09Å1.10Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
N2HBsing1.01Å1.00Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3C22N3120.0°119.6°
O3C22C23124.6°119.5°
N3C22C23115.5°120.9°
C22N3C21126.6°120.4°
C22N3H3116.7°119.8°
C22C23C24119.0°119.9°
C22C23C25120.0°120.3°
N3C21C26119.0°119.7°
N3C21C9120.3°120.7°
C21N3H3116.7°119.8°
C24C23C25121.0°119.9°
C23C24H241109.5°109.5°
C23C24H242109.5°109.5°
C23C24H243109.5°109.5°
C23C25C26122.9°119.2°
C23C25H25118.5°120.4°
C25C26C6123.9°120.9°
C25C26C21116.0°119.5°
C26C25H25118.5°120.4°
C6C26C21120.1°119.7°
C26C6C4122.8°120.2°
C26C6C7118.9°119.6°
C26C21C9120.8°119.6°
C4C6C7118.2°120.2°
C6C4C3121.9°120.5°
C6C4C5121.5°120.5°
C6C7C8120.7°120.3°
C6C7H7119.7°119.9°
C3C4C5116.5°118.9°
C4C3N123.9°120.5°
C4C3HA118.0°119.8°
C4C5C1121.1°118.3°
C4C5H5119.4°120.8°
C3NC2117.5°121.9°
NC3HA118.0°119.7°
NC2C1123.9°121.1°
NC2H2118.0°119.5°
C2C1C5117.0°119.3°
C2C1C121.5°120.4°
C1C2H2118.0°119.5°
C5C1C121.5°120.3°
C1C5H5119.4°120.9°
C1CHC1109.5°109.5°
C1CHC2109.5°109.5°
C1CHC3109.4°109.5°
C21C9C8117.6°120.0°
C21C9N1119.9°120.0°
C8C9N1122.5°120.0°
C9C8C7121.9°120.7°
C9C8H8119.1°119.6°
C9N1C10126.7°120.0°
C9N1H1105.0°120.0°
C8C7H7119.7°119.8°
C7C8H8119.0°119.6°
N1C10C14110.7°109.5°
N1C10C11110.7°109.5°
C10N1H1105.0°120.0°
N1C10H10109.1°109.5°
C14C10C11109.7°109.2°
C10C14C13111.0°109.2°
C10C14O106.7°109.5°
C14C10H10108.3°109.5°
C10C14H14109.7°109.5°
C10C11C12111.4°109.3°
C11C10H10108.3°109.5°
C10C11H111109.0°109.5°
C10C11H112109.0°109.5°
C13C14O108.8°109.5°
C14C13N2110.6°109.5°
C13C14H14109.6°109.5°
C14C13H131109.2°109.5°
C14C13H132109.2°109.5°
C14OC15114.9°114.0°
OC14H14111.0°109.6°
C13N2C12115.5°111.2°
N2C13H131109.2°109.5°
N2C13H132109.2°109.5°
C13N2HB107.9°111.0°
N2C12C11112.1°109.5°
C12N2HB107.9°111.0°
N2C12H121108.8°109.5°
N2C12H122108.8°109.5°
C12C11H111109.0°109.5°
C12C11H112109.0°109.5°
C11C12H121108.8°109.4°
C11C12H122108.8°109.5°
OC15C16106.8°109.5°
OC15H151110.1°109.5°
OC15H152110.1°109.5°
C15C16C20110.1°109.2°
C15C16C17111.0°109.3°
C16C15H151110.1°109.5°
C16C15H152110.1°109.5°
C15C16H16109.0°109.3°
C20C16C17109.2°110.6°
C16C20C19112.6°110.0°
C20C16H16108.7°109.2°
C16C20H201108.7°109.4°
C16C20H202108.7°109.4°
C16C17C18115.4°110.0°
C17C16H16108.8°109.2°
C16C17H171108.0°109.3°
C16C17H172107.9°109.4°
C20C19S110.4°109.0°
C19C20H201108.7°109.4°
C19C20H202108.7°109.4°
C20C19H191109.2°109.6°
C20C19H192109.2°109.5°
C19SO1109.3°108.7°
C19SO2109.0°108.7°
C19SC18100.8°101.3°
SC19H191109.2°109.5°
SC19H192109.2°109.5°
O1SO2118.2°119.3°
O1SC18109.1°108.7°
O2SC18109.1°108.8°
SC18C17109.3°109.0°
SC18H181109.5°109.6°
SC18H182109.5°109.6°
C18C17H171107.9°109.4°
C18C17H172107.9°109.4°
C17C18H181109.5°109.6°
C17C18H182109.5°109.5°
H241C24H242109.5°109.6°
H241C24H243109.5°109.4°
H242C24H243109.4°109.4°
HC1CHC2109.5°109.4°
HC1CHC3109.5°109.4°
HC2CHC3109.5°109.4°
H111C11H112109.5°109.5°
H131C13H132109.5°109.4°
H121C12H122109.5°109.5°
H151C15H152109.5°109.4°
H201C20H202109.5°109.3°
H171C17H172109.5°109.3°
H191C19H192109.5°109.6°
H181C18H182109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3C22N3C23179.0°179.8°
O3C22N3C21177.5°179.9°
O3C22C23C245.4°0.0°
O3C22C23C25176.9°180.0°
O3C22N3H32.5°0.0°
C22N3C21H3180.0°179.9°
N3C22C23C24175.7°179.8°
N3C22C23C252.1°0.3°
C22N3C21C260.6°0.1°
C22N3C21C9179.0°180.0°
C23C22N3C211.5°0.3°
C22C23C24C25177.7°180.0°
C22C23C25C260.7°0.0°
C23C22N3H3178.5°179.8°
C22C23C24H241180.0°0.1°
C22C23C24H24260.0°120.0°
C22C23C24H24360.0°120.0°
C22C23C25H25179.3°180.0°
N3C21C26C252.0°0.2°
N3C21C26C6178.4°180.0°
N3C21C26C9179.6°179.9°
N3C21C9C8179.8°179.9°
N3C21C9N10.2°0.0°
C24C23C25C26177.1°180.0°
C23C24H241H242120.0°120.1°
C23C24H241H243120.0°119.9°
C23C24H242H243120.0°120.0°
C24C23C25H253.0°0.1°
C23C25C26H25180.0°180.0°
C23C25C26C6179.0°180.0°
C23C25C26C211.4°0.2°
C25C23C24H2412.3°180.0°
C25C23C24H242122.3°59.9°
C25C23C24H243117.8°60.1°
C25C26C6C21179.6°179.8°
C25C26C6C47.3°0.0°
C25C26C6C7176.9°180.0°
C25C26C21C9177.6°179.7°
C26C6C4C7175.8°180.0°
C26C6C4C352.5°50.0°
C26C6C4C5128.1°129.8°
C6C26C21C92.0°0.1°
C26C6C7C81.5°0.5°
C6C26C25H251.0°0.0°
C26C6C7H7178.4°180.0°
C21C26C6C4173.1°179.8°
C21C26C6C72.7°0.2°
C26C21C9C80.2°0.0°
C26C21C9N1179.4°179.9°
C26C21N3H3179.4°180.0°
C21C26C25H25178.6°179.8°
C6C4C3C5179.4°179.7°
C6C4C3N179.7°180.0°
C6C4C5C1179.7°179.8°
C4C6C7C8174.5°179.5°
C4C6C7H75.6°0.0°
C6C4C3HA0.3°0.0°
C6C4C5H50.3°0.0°
C7C6C4C3123.4°130.0°
C7C6C4C556.0°50.3°
C6C7C8C90.3°0.5°
C6C7C8H7180.0°179.5°
C6C7C8H8179.7°179.8°
C4C3NHA180.0°180.0°
C4C3NC20.1°0.0°
C3C4C5C10.3°0.5°
C3C4C5H5179.7°179.7°
C5C4C3N0.3°0.3°
C4C5C1C20.0°0.5°
C4C5C1H5180.0°179.8°
C4C5C1C179.8°179.7°
C5C4C3HA179.7°179.7°
C3NC2C10.4°0.0°
C3NC2H2179.6°179.9°
NC2C1H2180.0°179.9°
NC2C1C50.3°0.3°
NC2C1C179.4°180.0°
C2NC3HA179.9°180.0°
C2C1C5C179.7°179.8°
C2C1C5H5180.0°179.7°
C2C1CHC190.1°90.0°
C2C1CHC2149.8°150.0°
C2C1CHC329.9°30.0°
C5C1C2H2179.7°179.8°
C5C1CHC190.2°89.8°
C5C1CHC229.8°30.2°
C5C1CHC3149.8°150.2°
CC1C5H50.3°0.0°
CC1C2H20.6°0.1°
C1CHC1HC2120.0°120.1°
C1CHC1HC3120.0°120.0°
C1CHC2HC3120.0°120.0°
C21C9C8N1179.6°179.9°
C21C9C8C70.9°0.3°
C21C9N1C10171.2°180.0°
C9C21N3H31.0°0.1°
C21C9C8H8179.1°179.9°
C21C9N1H148.9°0.1°
C9C8C7H8180.0°179.6°
C8C9N1C108.4°0.1°
C9C8C7H7179.8°180.0°
C8C9N1H1130.7°180.0°
N1C9C8C7179.4°179.8°
C9N1C10H1122.3°179.9°
C9N1C10C1494.8°154.9°
C9N1C10C11143.3°85.3°
N1C9C8H80.6°0.2°
C9N1C10H1024.3°34.8°
N1C10C14C11122.4°119.9°
N1C10C14H10119.6°120.1°
N1C10C11H10119.6°120.1°
N1C10C14C13178.9°177.5°
N1C10C14O62.7°62.5°
N1C10C11C12177.4°177.6°
N1C10C14H1457.7°57.7°
N1C10C11H11157.1°57.7°
N1C10C11H11262.4°62.5°
C14C10C11H10118.0°120.0°
C10C14C13O117.1°119.9°
C10C14C13H14121.3°119.9°
C10C14OH14119.5°120.1°
C10C14C13N255.0°59.1°
C14C10C11C1255.0°57.6°
C10C14OC15158.5°150.0°
C14C10N1H127.5°25.0°
C14C10C11H11165.3°62.3°
C14C10C11H112175.2°177.6°
C10C14C13H13165.2°60.9°
C10C14C13H132175.1°179.2°
C11C10C14C1356.5°57.6°
C11C10C14O174.9°177.6°
C10C11C12N252.0°59.1°
C10C11C12H111120.3°119.9°
C10C11C12H112120.3°120.0°
C11C10N1H194.4°94.8°
C11C10C14H1464.7°62.3°
C10C11H111H112119.2°120.1°
C10C11C12H12168.4°60.9°
C10C11C12H122172.4°179.1°
C13C14OH14120.7°120.1°
C14C13N2H131120.1°120.0°
C14C13N2H132120.2°120.0°
C14C13N2C1253.1°61.8°
C13C14OC1581.7°90.2°
C13C14C10H1061.5°62.3°
C14C13H131H132119.5°119.9°
C14C13N2HB174.0°174.1°
OC14C13N2172.1°179.1°
C14OC15C16166.5°180.0°
OC14C10H1057.0°57.6°
OC14C13H13151.9°59.1°
OC14C13H13267.7°60.8°
C14OC15H15147.0°60.0°
C14OC15H15273.9°60.0°
C13N2C12HB120.9°124.1°
C13N2C12C1152.1°61.7°
N2C13C14H1466.4°60.8°
N2C13H131H132119.5°120.0°
C13N2C12H12168.3°58.2°
C13N2C12H122172.5°178.3°
N2C12C11H121120.4°120.0°
N2C12C11H122120.4°120.0°
N2C12C11H11168.3°60.8°
N2C12C11H112172.3°179.1°
C12N2C13H13167.0°58.3°
C12N2C13H132173.3°178.2°
N2C12H121H122118.8°120.0°
C12C11C10H1063.0°62.3°
C12C11H111H112119.1°120.1°
C11C12N2HB173.0°174.1°
C11C12H121H122118.8°120.0°
OC15C16H151119.6°120.0°
OC15C16H152119.6°120.0°
OC15C16C20173.3°175.0°
OC15C16C1765.7°63.9°
C15OC14H1439.0°29.9°
OC15H151H152121.2°120.0°
OC15C16H1654.1°55.6°
C15C16C20C17122.1°120.3°
C15C16C20H16119.3°119.5°
C15C16C17H16119.9°119.5°
C15C16C20C19177.0°169.7°
C15C16C17C18176.9°169.7°
C16C15H151H152121.2°120.0°
C15C16C20H20162.5°70.1°
C15C16C20H20256.6°49.6°
C15C16C17H17156.1°49.6°
C15C16C17H17262.2°70.1°
C20C16C17H16118.5°120.2°
C16C20C19H201120.4°120.2°
C16C20C19H202120.5°120.2°
C16C20C19S63.2°63.7°
C20C16C17C1861.5°70.0°
C20C16C15H15167.1°64.9°
C20C16C15H15253.7°55.0°
C16C20H201H202118.5°119.7°
C20C16C17H171177.6°169.8°
C20C16C17H17259.4°50.2°
C16C20C19H191176.7°176.5°
C16C20C19H19256.9°56.2°
C17C16C20C1960.8°70.0°
C16C17C18S61.8°63.7°
C16C17C18H171120.9°120.1°
C16C17C18H172120.8°120.2°
C17C16C15H15153.9°56.2°
C17C16C15H152174.8°176.1°
C17C16C20H20159.6°50.2°
C17C16C20H202178.7°169.9°
C16C17H171H172117.3°119.7°
C16C17C18H181178.2°176.5°
C16C17C18H18258.1°56.2°
C20C19SH191120.1°119.9°
C20C19SH192120.1°119.8°
C20C19SO1171.4°168.6°
C20C19SO258.1°60.2°
C20C19SC1856.6°54.3°
C19C20C16H1657.7°50.2°
C19C20H201H202118.6°119.7°
C20C19H191H192119.6°120.3°
C19SO1O2125.3°125.2°
C19SO1C18109.3°109.4°
C19SO2C18109.2°109.5°
C19SC18C1754.8°54.3°
SC19C20H20157.3°56.5°
SC19C20H202176.4°176.2°
SC19H191H192119.5°120.2°
C19SC18H181174.7°174.2°
C19SC18H18265.2°65.6°
O1SO2C18125.4°125.3°
O1SC18C17169.7°168.6°
O1SC19H19168.5°71.5°
O1SC19H19251.2°48.8°
O1SC18H18170.4°71.5°
O1SC18H18249.7°48.8°
O2SC18C1759.8°60.1°
O2SC19H19162.0°59.7°
O2SC19H192178.3°180.0°
O2SC18H18160.1°59.8°
O2SC18H182179.8°179.9°
SC18C17H181120.0°119.9°
SC18C17H182120.0°119.9°
SC18C17H171177.3°176.2°
SC18C17H17259.0°56.5°
C18SC19H191176.7°174.2°
C18SC19H19263.6°65.5°
SC18H181H182120.1°120.2°
C18C17C16H1657.0°50.2°
C18C17H171H172117.3°119.7°
C17C18H181H182120.1°120.2°
H241C24H242H243120.0°120.0°
H7C7C8H80.3°0.3°
HC1CHC2HC3120.0°119.9°
H1N1C10H10146.6°145.1°
H10C10C14H14177.3°177.8°
H10C10C11H111176.7°177.7°
H10C10C11H11257.2°57.6°
H14C14C13H131173.5°179.2°
H14C14C13H13253.8°59.3°
H111C11C12H121171.3°179.2°
H111C11C12H12252.1°59.2°
H112C11C12H12151.9°59.1°
H112C11C12H12267.3°60.9°
H131C13N2HB53.8°65.9°
H132C13N2HB65.8°54.1°
HBN2C12H12152.6°65.9°
HBN2C12H12266.7°54.1°
H151C15C16H16173.7°175.6°
H152C15C16H1665.5°64.4°
H16C16C20H201178.2°170.4°
H16C16C20H20262.8°69.9°
H16C16C17H17163.8°69.9°
H16C16C17H172177.9°170.4°
H201C20C19H19162.8°63.3°
H201C20C19H192177.4°176.3°
H202C20C19H19156.3°56.3°
H202C20C19H19263.5°64.0°
H171C17C18H18157.3°56.3°
H171C17C18H18262.8°63.9°
H172C17C18H18161.0°63.3°
H172C17C18H182179.0°176.4°

222415

PDB entries from 2024-07-10

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