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YC8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1doub1.21Å1.33Å
O2C1sing1.35Å1.23Å
C1C2sing1.48Å1.50Å
C5N1doub1.32Å1.35ÅAromatic
N1C4sing1.32Å1.34ÅAromatic
C6C2doub1.41Å1.39ÅAromatic
C2C3sing1.40Å1.38ÅAromatic
C7N2sing1.35Å1.33Å
N2C6sing1.39Å1.42Å
N2HN2sing0.97Å1.00Å
O2HO2sing0.97Å0.95Å
C3C4doub1.38Å1.39ÅAromatic
C3H3sing1.08Å1.08Å
C7O3doub1.21Å1.23Å
C4H4sing1.08Å1.08Å
C6C5sing1.39Å1.40ÅAromatic
C5H5sing1.08Å1.08Å
C8C7sing1.51Å1.51Å
C9C8sing1.53Å1.51Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C10C9sing1.53Å1.51Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C11C10sing1.51Å1.51Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C12C11doub1.38Å1.39ÅAromatic
C11C16sing1.38Å1.39ÅAromatic
C13C12sing1.38Å1.39ÅAromatic
C12H12sing1.08Å1.08Å
C13C14doub1.38Å1.40ÅAromatic
C13H13sing1.08Å1.08Å
C14C15sing1.38Å1.39ÅAromatic
C14H14sing1.08Å1.08Å
C15C16doub1.38Å1.39ÅAromatic
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1O2120.5°120.0°
O1C1C2120.0°120.0°
O2C1C2119.5°120.0°
C1O2HO2109.5°117.0°
C1C2C6121.9°120.9°
C1C2C3119.5°121.0°
C5N1C4117.6°122.2°
N1C5C6122.1°120.8°
N1C5H5119.0°119.6°
N1C4C3123.8°121.1°
N1C4H4118.1°119.4°
C6C2C3118.6°118.1°
C2C6N2116.5°120.7°
C2C6C5119.4°118.7°
C2C3C4118.5°119.1°
C2C3H3120.8°120.5°
C7N2C6126.4°120.0°
C7N2HN2116.8°120.0°
N2C7O3126.3°120.0°
N2C7C8110.9°120.0°
C6N2HN2116.8°120.0°
N2C6C5124.1°120.6°
C4C3H3120.7°120.5°
C3C4H4118.1°119.5°
O3C7C8122.8°120.0°
C6C5H5118.9°119.6°
C7C8C9113.0°109.4°
C7C8H8108.6°109.5°
C7C8H8A108.6°109.5°
C9C8H8108.6°109.5°
C9C8H8A108.6°109.5°
C8C9C10111.9°109.5°
C8C9H9108.9°109.5°
C8C9H9A108.9°109.5°
H8C8H8A109.5°109.5°
C10C9H9108.8°109.5°
C10C9H9A108.9°109.5°
C9C10C11106.8°109.5°
C9C10H10110.1°109.5°
C9C10H10A110.1°109.5°
H9C9H9A109.5°109.4°
C11C10H10110.1°109.4°
C11C10H10A110.2°109.5°
C10C11C12120.1°120.0°
C10C11C16119.6°120.0°
H10C10H10A109.5°109.4°
C12C11C16120.3°120.0°
C11C12C13119.7°120.0°
C11C12H12120.2°120.0°
C11C16C15120.1°120.0°
C11C16H16119.9°120.0°
C13C12H12120.1°120.0°
C12C13C14119.9°120.0°
C12C13H13120.0°120.0°
C14C13H13120.0°120.0°
C13C14C15120.4°120.0°
C13C14H14119.8°120.0°
C15C14H14119.8°120.0°
C14C15C16119.6°120.0°
C14C15H15120.2°120.0°
C16C15H15120.2°120.0°
C15C16H16120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1O2C2179.7°179.7°
O1C1C2C6152.1°5.0°
O1C1C2C327.8°175.1°
O1C1O2HO20.0°0.3°
O2C1C2C628.2°175.3°
O2C1C2C3151.9°4.6°
C1C2C6C3179.9°180.0°
C1C2C6N21.3°0.0°
C2C1O2HO2179.7°180.0°
C1C2C3C4179.7°180.0°
C1C2C3H30.3°0.0°
C1C2C6C5179.3°180.0°
N1C5C6C20.8°0.0°
N1C5C6N2178.7°180.0°
C5N1C4C30.0°0.0°
C5N1C4H4180.0°179.9°
N1C5C6H5180.0°180.0°
N1C4C3C20.0°0.1°
N1C4C3H4180.0°179.9°
N1C4C3H3180.0°180.0°
C4N1C5C60.4°0.0°
C4N1C5H5179.5°180.0°
C2C6N2C7171.4°145.3°
C2C6N2C5177.9°180.0°
C2C6N2HN28.6°34.7°
C6C2C3C40.4°0.1°
C6C2C3H3179.6°180.0°
C2C6C5H5179.1°180.0°
C3C2C6N2178.8°180.0°
C2C3C4H3180.0°179.9°
C2C3C4H4180.0°180.0°
C3C2C6C50.8°0.1°
C7N2C6HN2180.0°180.0°
N2C7O3C8178.8°180.0°
C7N2C6C56.5°34.7°
N2C7C8C9165.7°180.0°
N2C7C8H845.1°60.0°
N2C7C8H8A73.8°60.1°
C6N2C7O34.5°5.3°
N2C6C5H51.3°0.0°
C6N2C7C8174.5°174.7°
HN2N2C7O3175.5°174.7°
HN2N2C6C5173.5°145.3°
HN2N2C7C85.5°5.3°
H3C3C4H40.0°0.1°
O3C7C8C913.3°0.0°
O3C7C8H8133.9°120.0°
O3C7C8H8A107.2°119.9°
C7C8C9H8120.5°120.0°
C7C8C9H8A120.5°120.0°
C7C8H8H8A118.4°120.0°
C7C8C9C1084.2°180.0°
C7C8C9H936.2°60.0°
C7C8C9H9A155.4°60.0°
C9C8H8H8A118.4°120.0°
C8C9C10H9120.4°120.0°
C8C9C10H9A120.4°120.0°
C8C9H9H9A118.9°120.0°
C8C9C10C11164.7°180.0°
C8C9C10H1045.1°60.0°
C8C9C10H10A75.7°60.0°
H8C8C9C10155.3°60.0°
H8C8C9H984.3°180.0°
H8C8C9H9A34.9°60.0°
H8AC8C9C1036.4°60.0°
H8AC8C9H9156.7°60.0°
H8AC8C9H9A84.0°179.9°
C10C9H9H9A118.9°120.0°
C9C10C11H10119.6°120.0°
C9C10C11H10A119.6°120.0°
C9C10H10H10A121.2°120.0°
C9C10C11C12112.4°89.7°
C9C10C11C1666.9°90.0°
H9C9C10C1175.0°60.0°
H9C9C10H10165.5°180.0°
H9C9C10H10A44.6°60.0°
H9AC9C10C1144.3°60.0°
H9AC9C10H1075.3°60.0°
H9AC9C10H10A163.9°180.0°
C11C10H10H10A121.2°120.0°
C10C11C12C16179.2°179.7°
C10C11C12C13179.9°180.0°
C10C11C12H120.1°0.0°
C10C11C16C15179.9°179.8°
C10C11C16H160.2°0.0°
H10C10C11C127.2°150.3°
H10C10C11C16173.5°30.0°
H10AC10C11C12128.1°30.3°
H10AC10C11C1652.7°150.0°
C11C12C13H12180.0°180.0°
C11C12C13C140.3°0.1°
C11C12C13H13179.7°179.9°
C12C11C16C150.6°0.5°
C12C11C16H16179.4°179.7°
C16C11C12C130.6°0.3°
C16C11C12H12179.3°179.7°
C11C16C15C140.3°0.5°
C11C16C15H16180.0°179.8°
C11C16C15H15179.8°179.7°
C12C13C14H13180.0°180.0°
C12C13C14C150.1°0.0°
C12C13C14H14179.9°179.9°
H12C12C13C14179.7°180.0°
H12C12C13H130.3°0.1°
C13C14C15H14180.0°179.9°
C13C14C15C160.1°0.2°
C13C14C15H15179.9°180.0°
H13C13C14C15180.0°180.0°
H13C13C14H140.1°0.1°
C14C15C16H15180.0°179.8°
C14C15C16H16179.8°179.7°
H14C14C15C16179.9°179.9°
H14C14C15H150.1°0.1°
H15C15C16H160.2°0.1°

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PDB entries from 2024-07-17

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