YC5
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| F1 | C4 | sing | 1.35Å | 1.35Å | |
| C5 | C4 | doub | 1.38Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.39Å | 1.40Å | Aromatic |
| S1 | C6 | sing | 1.76Å | 1.77Å | |
| C4 | C3 | sing | 1.39Å | 1.38Å | Aromatic |
| C6 | C1 | doub | 1.39Å | 1.38Å | Aromatic |
| C3 | N1 | sing | 1.40Å | 1.35Å | |
| C3 | C2 | doub | 1.39Å | 1.39Å | Aromatic |
| C1 | C2 | sing | 1.38Å | 1.38Å | Aromatic |
| C1 | H1 | sing | 1.08Å | 1.08Å | |
| C2 | H2 | sing | 1.08Å | 1.08Å | |
| C5 | H3 | sing | 1.08Å | 1.08Å | |
| S1 | H4 | sing | 1.35Å | 1.30Å | |
| N1 | H5 | sing | 0.97Å | 1.00Å | |
| N1 | H6 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| F1 | C4 | C5 | 119.9° | 120.0° |
| F1 | C4 | C3 | 118.4° | 120.1° |
| C4 | C5 | C6 | 119.9° | 119.9° |
| C5 | C4 | C3 | 121.6° | 120.0° |
| C4 | C5 | H3 | 120.0° | 120.0° |
| C5 | C6 | S1 | 121.6° | 120.0° |
| C5 | C6 | C1 | 118.6° | 120.0° |
| C6 | C5 | H3 | 120.0° | 120.1° |
| S1 | C6 | C1 | 119.9° | 120.0° |
| C6 | S1 | H4 | 102.0° | 103.0° |
| C4 | C3 | N1 | 119.6° | 120.0° |
| C4 | C3 | C2 | 118.4° | 120.0° |
| C6 | C1 | C2 | 121.0° | 120.1° |
| C6 | C1 | H1 | 119.5° | 119.9° |
| N1 | C3 | C2 | 122.0° | 120.1° |
| C3 | N1 | H5 | 109.5° | 120.0° |
| C3 | N1 | H6 | 109.5° | 120.0° |
| C3 | C2 | C1 | 120.5° | 120.0° |
| C3 | C2 | H2 | 119.8° | 119.9° |
| C2 | C1 | H1 | 119.5° | 120.0° |
| C1 | C2 | H2 | 119.8° | 120.0° |
| H5 | N1 | H6 | 109.5° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| F1 | C4 | C5 | C3 | 176.0° | 179.9° |
| F1 | C4 | C5 | C6 | 177.9° | 179.8° |
| F1 | C4 | C3 | N1 | 4.1° | 0.0° |
| F1 | C4 | C3 | C2 | 177.7° | 180.0° |
| F1 | C4 | C5 | H3 | 2.1° | 0.1° |
| C4 | C5 | C6 | H3 | 180.0° | 179.7° |
| C4 | C5 | C6 | S1 | 179.1° | 180.0° |
| C4 | C5 | C6 | C1 | 0.9° | 0.6° |
| C5 | C4 | C3 | N1 | 179.8° | 179.9° |
| C5 | C4 | C3 | C2 | 1.6° | 0.1° |
| C5 | C6 | S1 | C1 | 179.9° | 179.4° |
| C6 | C5 | C4 | C3 | 1.9° | 0.3° |
| C5 | C6 | C1 | C2 | 0.3° | 0.6° |
| C5 | C6 | C1 | H1 | 179.7° | 179.6° |
| C5 | C6 | S1 | H4 | 180.0° | 90.0° |
| S1 | C6 | C1 | C2 | 179.7° | 180.0° |
| S1 | C6 | C1 | H1 | 0.3° | 0.2° |
| S1 | C6 | C5 | H3 | 0.8° | 0.3° |
| C4 | C3 | N1 | C2 | 178.1° | 180.0° |
| C4 | C3 | C2 | C1 | 0.4° | 0.1° |
| C4 | C3 | C2 | H2 | 179.6° | 180.0° |
| C3 | C4 | C5 | H3 | 178.1° | 180.0° |
| C4 | C3 | N1 | H5 | 180.0° | 180.0° |
| C4 | C3 | N1 | H6 | 60.0° | 0.0° |
| C6 | C1 | C2 | C3 | 0.6° | 0.3° |
| C6 | C1 | C2 | H1 | 180.0° | 179.7° |
| C6 | C1 | C2 | H2 | 179.4° | 179.7° |
| C1 | C6 | C5 | H3 | 179.1° | 179.7° |
| C1 | C6 | S1 | H4 | 0.1° | 90.6° |
| N1 | C3 | C2 | C1 | 178.5° | 179.9° |
| N1 | C3 | C2 | H2 | 1.5° | 0.0° |
| C3 | N1 | H5 | H6 | 120.1° | 180.0° |
| C3 | C2 | C1 | H2 | 180.0° | 179.9° |
| C3 | C2 | C1 | H1 | 179.5° | 179.9° |
| C2 | C3 | N1 | H5 | 1.9° | 0.0° |
| C2 | C3 | N1 | H6 | 118.2° | 180.0° |
| H1 | C1 | C2 | H2 | 0.5° | 0.0° |
