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YB5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C43C42doub1.38Å1.38ÅAromatic
C43C44sing1.38Å1.38ÅAromatic
C42C41sing1.38Å1.38ÅAromatic
C44C39doub1.38Å1.39ÅAromatic
C41C40doub1.38Å1.39ÅAromatic
C39C40sing1.38Å1.39ÅAromatic
C39C38sing1.51Å1.51Å
C22C21sing1.53Å1.53Å
C22C17sing1.53Å1.53Å
C21C20sing1.53Å1.52Å
C38C37sing1.53Å1.52Å
C17C16sing1.53Å1.52Å
C17C18sing1.53Å1.52Å
N15C16sing1.46Å1.46Å
N15C14sing1.37Å1.35Å
C20C19sing1.53Å1.52Å
N23C14doub1.30Å1.29Å
C18C19sing1.53Å1.53Å
C37C36sing1.53Å1.50Å
C14N13sing1.37Å1.35Å
C36N35sing1.47Å1.45Å
N13C12sing1.46Å1.46Å
N35C34sing1.38Å1.34Å
C12C11sing1.53Å1.51Å
N28C27doub1.30Å1.31ÅAromatic
N28C29sing1.35Å1.39ÅAromatic
C27N26sing1.36Å1.37ÅAromatic
C11C10sing1.53Å1.51Å
C34C29doub1.41Å1.42ÅAromatic
C34N33sing1.33Å1.35ÅAromatic
C29C30sing1.41Å1.38ÅAromatic
O6C5sing1.43Å1.42Å
N26C30sing1.37Å1.38ÅAromatic
N26C25sing1.46Å1.46Å
N33C32doub1.32Å1.34ÅAromatic
C30N31doub1.33Å1.34ÅAromatic
C5C25sing1.55Å1.52Å
C5C4sing1.55Å1.54Å
C10S9sing1.81Å1.81Å
C25O24sing1.44Å1.41Å
C32N31sing1.32Å1.34ÅAromatic
C4O3sing1.43Å1.43Å
C4C7sing1.54Å1.53Å
S9C8sing1.81Å1.81Å
O24C7sing1.44Å1.44Å
C7C8sing1.53Å1.52Å
C4H1sing1.09Å1.10Å
C5H2sing1.09Å1.10Å
C7H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C10H6sing1.09Å1.10Å
C10H7sing1.09Å1.10Å
C17H8sing1.09Å1.10Å
C20H9sing1.09Å1.10Å
C20H10sing1.09Å1.10Å
C21H11sing1.09Å1.10Å
C21H12sing1.09Å1.10Å
C22H13sing1.09Å1.10Å
C22H14sing1.09Å1.10Å
C11H15sing1.09Å1.10Å
C11H16sing1.09Å1.10Å
C12H17sing1.09Å1.10Å
C12H18sing1.09Å1.10Å
C16H19sing1.09Å1.10Å
C16H20sing1.09Å1.10Å
C18H21sing1.09Å1.10Å
C18H22sing1.09Å1.10Å
C19H23sing1.09Å1.10Å
C19H24sing1.09Å1.10Å
C25H25sing1.09Å1.10Å
C27H26sing1.08Å1.08Å
C32H27sing1.08Å1.08Å
C36H28sing1.09Å1.10Å
C36H29sing1.09Å1.10Å
C37H30sing1.09Å1.10Å
C37H31sing1.09Å1.10Å
C38H32sing1.09Å1.10Å
C38H33sing1.09Å1.10Å
C40H34sing1.08Å1.08Å
C41H35sing1.08Å1.08Å
C42H36sing1.08Å1.08Å
C43H37sing1.08Å1.08Å
C44H38sing1.08Å1.08Å
N13H39sing0.97Å1.00Å
N15H40sing0.97Å1.00Å
N23H41sing0.97Å1.00Å
N35H42sing0.97Å1.00Å
O3H43sing0.97Å0.95Å
O6H44sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C42C43C44120.2°120.0°
C43C42C41119.6°120.0°
C43C42H36120.2°120.0°
C42C43H37119.9°120.0°
C43C44C39120.7°120.0°
C44C43H37119.9°120.0°
C43C44H38119.7°120.0°
C42C41C40120.2°120.0°
C42C41H35119.9°120.0°
C41C42H36120.2°120.0°
C44C39C40118.6°120.0°
C44C39C38120.4°120.0°
C39C44H38119.7°120.0°
C41C40C39120.6°120.0°
C41C40H34119.7°120.0°
C40C41H35119.9°120.0°
C40C39C38120.9°120.0°
C39C40H34119.7°120.0°
C39C38C37118.6°109.4°
C39C38H32107.1°109.5°
C39C38H33107.1°109.5°
C21C22C17112.4°109.5°
C22C21C20111.2°109.5°
C22C21H11109.0°109.5°
C22C21H12109.1°109.4°
C21C22H13108.8°109.5°
C21C22H14108.7°109.4°
C22C17C16111.1°109.5°
C22C17C18109.5°109.5°
C22C17H8108.3°109.5°
C17C22H13108.7°109.5°
C17C22H14108.8°109.5°
C21C20C19110.9°109.5°
C21C20H9109.1°109.5°
C21C20H10109.1°109.5°
C20C21H11109.1°109.5°
C20C21H12109.0°109.5°
C38C37C36112.4°109.5°
C38C37H30108.7°109.5°
C38C37H31108.7°109.5°
C37C38H32107.1°109.5°
C37C38H33107.1°109.5°
C16C17C18111.2°109.5°
C17C16N15112.9°109.4°
C16C17H8108.3°109.5°
C17C16H19108.6°109.4°
C17C16H20108.6°109.4°
C17C18C19111.7°109.4°
C18C17H8108.3°109.4°
C17C18H21108.9°109.4°
C17C18H22108.9°109.5°
C16N15C14129.6°120.0°
N15C16H19108.6°109.5°
N15C16H20108.6°109.5°
C16N15H40115.2°120.1°
N15C14N23119.3°120.0°
N15C14N13124.5°120.0°
C14N15H40115.2°120.0°
C20C19C18111.3°109.5°
C19C20H9109.1°109.5°
C19C20H10109.1°109.4°
C20C19H23109.0°109.5°
C20C19H24109.0°109.5°
N23C14N13116.1°120.0°
C14N23H41112.0°120.0°
C19C18H21108.9°109.4°
C19C18H22108.9°109.5°
C18C19H23109.0°109.4°
C18C19H24109.0°109.5°
C37C36N35112.3°109.5°
C37C36H28108.8°109.5°
C37C36H29108.8°109.5°
C36C37H30108.7°109.5°
C36C37H31108.7°109.5°
C14N13C12130.3°120.0°
C14N13H39114.9°120.0°
C36N35C34123.8°120.0°
N35C36H28108.8°109.5°
N35C36H29108.7°109.5°
C36N35H42105.8°120.0°
N13C12C11112.1°109.5°
N13C12H17108.8°109.5°
N13C12H18108.8°109.5°
C12N13H39114.9°120.0°
N35C34C29123.2°120.7°
N35C34N33118.2°120.8°
C34N35H42105.8°120.0°
C12C11C10113.6°109.5°
C12C11H15108.4°109.5°
C12C11H16108.4°109.5°
C11C12H17108.8°109.5°
C11C12H18108.8°109.4°
C27N28C29103.7°109.5°
N28C27N26114.3°110.0°
N28C27H26122.8°125.1°
N28C29C34132.8°134.7°
N28C29C30110.6°107.1°
C27N26C30105.4°107.4°
C27N26C25127.6°126.3°
N26C27H26122.9°125.0°
C11C10S9111.6°109.4°
C11C10H6109.0°109.4°
C11C10H7108.9°109.5°
C10C11H15108.4°109.5°
C10C11H16108.4°109.4°
C29C34N33118.4°118.5°
C34C29C30116.5°118.1°
C34N33C32118.2°121.2°
C29C30N26106.0°106.0°
C29C30N31126.6°119.1°
O6C5C25108.6°110.9°
O6C5C4113.5°110.9°
O6C5H2111.8°110.8°
C5O6H44109.5°114.0°
C30N26C25127.0°126.3°
N26C30N31127.4°134.9°
N26C25C5115.3°110.6°
N26C25O24109.2°110.6°
N26C25H25109.2°110.7°
N33C32N31128.9°122.5°
N33C32H27115.6°118.7°
C30N31C32111.4°120.6°
C25C5C4102.4°102.1°
C5C25O24104.8°103.5°
C25C5H2110.2°110.9°
C5C25H25108.4°110.6°
C5C4O3114.9°110.5°
C5C4C7104.0°104.1°
C5C4H1108.4°110.6°
C4C5H2109.9°110.9°
C10S9C8103.4°103.0°
S9C10H6108.9°109.5°
S9C10H7108.9°109.5°
C25O24C7105.0°107.0°
O24C25H25109.9°110.6°
N31C32H27115.5°118.8°
O3C4C7110.7°110.5°
O3C4H1110.0°110.5°
C4O3H43109.5°114.0°
C4C7O24105.7°107.3°
C4C7C8111.6°109.9°
C7C4H1108.6°110.5°
C4C7H3109.1°109.9°
S9C8C7108.7°109.5°
S9C8H4109.7°109.5°
S9C8H5109.6°109.5°
O24C7C8110.7°109.8°
O24C7H3110.3°110.0°
C8C7H3109.3°109.8°
C7C8H4109.6°109.4°
C7C8H5109.7°109.4°
H4C8H5109.5°109.5°
H6C10H7109.5°109.5°
H9C20H10109.5°109.5°
H11C21H12109.5°109.5°
H13C22H14109.5°109.5°
H15C11H16109.5°109.5°
H17C12H18109.5°109.4°
H19C16H20109.4°109.5°
H21C18H22109.5°109.5°
H23C19H24109.5°109.4°
H28C36H29109.4°109.5°
H30C37H31109.5°109.4°
H32C38H33109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C42C43C44H37180.0°179.8°
C43C42C41H36180.0°179.9°
C42C43C44C390.0°0.6°
C43C42C41C400.0°0.0°
C43C42C41H35180.0°180.0°
C42C43C44H38180.0°180.0°
C44C43C42C410.0°0.3°
C43C44C39H38180.0°179.5°
C43C44C39C400.1°0.6°
C43C44C39C38176.4°179.7°
C44C43C42H36180.0°179.8°
C42C41C40H35180.0°180.0°
C42C41C40C390.0°0.0°
C42C41C40H34180.0°180.0°
C41C42C43H37180.0°179.9°
C44C39C40C410.1°0.3°
C44C39C40C38176.5°179.7°
C44C39C38C37154.0°90.3°
C44C39C38H3284.7°149.7°
C44C39C38H3332.7°29.7°
C44C39C40H34179.9°179.7°
C39C44C43H37180.0°179.7°
C41C40C39H34180.0°180.0°
C41C40C39C38176.4°180.0°
C40C41C42H36180.0°180.0°
C40C39C38C3729.6°90.0°
C40C39C38H3291.7°30.0°
C40C39C38H33150.9°150.0°
C39C40C41H35180.0°180.0°
C40C39C44H38179.9°180.0°
C39C38C37H32121.3°120.0°
C39C38C37H33121.3°120.0°
C39C38C37C3675.4°180.0°
C39C38C37H3045.1°60.0°
C39C38C37H31164.2°60.0°
C39C38H32H33115.9°120.0°
C38C39C40H343.6°0.0°
C38C39C44H383.6°0.3°
C21C22C17H13120.4°120.0°
C21C22C17H14120.4°120.0°
C22C21C20H11120.3°120.0°
C22C21C20H12120.3°120.0°
C21C22C17C16135.8°180.0°
C21C22C17C1812.5°60.0°
C22C21C20C1946.1°60.0°
C21C22C17H8105.4°60.0°
C22C21C20H9166.3°180.0°
C22C21C20H1074.1°60.0°
C22C21H11H12119.2°120.0°
C21C22H13H14118.7°120.0°
C17C22C21C2061.5°60.0°
C22C17C16C18122.3°120.0°
C22C17C16H8118.8°120.0°
C22C17C18H8117.8°120.0°
C22C17C16N15132.2°65.0°
C22C17C18C1947.4°60.0°
C17C22C21H1158.8°180.0°
C17C22C21H12178.2°60.0°
C17C22H13H14118.7°120.0°
C22C17C16H19107.3°175.0°
C22C17C16H2011.7°55.0°
C22C17C18H21167.7°60.0°
C22C17C18H2272.9°180.0°
C21C20C19H9120.2°120.0°
C21C20C19H10120.2°120.0°
C21C20C19C1813.1°60.0°
C21C20H9H10119.4°120.0°
C20C21H11H12119.2°120.0°
C20C21C22H1358.9°180.0°
C20C21C22H14178.0°60.0°
C21C20C19H23133.4°60.0°
C21C20C19H24107.2°180.0°
C38C37C36H30120.4°120.0°
C38C37C36H31120.4°120.0°
C38C37C36N35152.4°180.0°
C38C37C36H2832.0°60.0°
C38C37C36H2987.2°60.0°
C38C37H30H31118.7°120.0°
C37C38H32H33115.8°120.0°
C16C17C18H8118.9°119.9°
C17C16N15H19120.5°120.0°
C17C16N15H20120.5°119.9°
C17C16N15C14146.7°180.0°
C16C17C18C1975.8°180.0°
C16C17C22H1315.3°60.0°
C16C17C22H14103.8°60.0°
C17C16H19H20118.4°119.9°
C16C17C18H2144.5°60.1°
C16C17C18H22163.9°60.0°
C17C16N15H4033.3°0.0°
C18C17C16N15105.5°174.9°
C17C18C19C2062.9°59.9°
C17C18C19H21120.3°119.9°
C17C18C19H22120.3°120.1°
C18C17C22H13108.0°180.0°
C18C17C22H14132.9°60.0°
C18C17C16H1915.1°54.9°
C18C17C16H20134.0°65.1°
C17C18H21H22119.0°120.1°
C17C18C19H23176.9°60.1°
C17C18C19H2457.4°180.0°
C16N15C14H40180.0°180.0°
C16N15C14N23176.2°0.0°
C16N15C14N132.6°180.0°
N15C16C17H813.4°55.0°
N15C16H19H20118.4°120.1°
N15C14N23N13178.9°180.0°
N15C14N13C120.3°180.0°
C14N15C16H1926.2°60.1°
C14N15C16H2092.8°60.0°
N15C14N13H39179.7°0.0°
N15C14N23H41178.9°180.0°
C20C19C18H23120.3°120.0°
C20C19C18H24120.3°120.1°
C19C20H9H10119.4°119.9°
C19C20C21H1174.1°180.0°
C19C20C21H12166.4°60.0°
C20C19C18H21176.8°60.0°
C20C19C18H2257.5°180.0°
C20C19H23H24119.1°120.0°
N23C14N13C12179.2°0.0°
N23C14N13H390.8°180.0°
N23C14N15H403.8°180.0°
C19C18C17H8165.3°60.1°
C18C19C20H9107.1°180.0°
C18C19C20H10133.3°60.0°
C19C18H21H22119.0°120.0°
C18C19H23H24119.2°119.9°
C37C36N35H28120.5°120.0°
C37C36N35H29120.4°120.0°
C37C36N35C34103.8°180.0°
C37C36H28H29118.7°120.0°
C36C37H30H31118.6°120.0°
C36C37C38H32163.3°60.0°
C36C37C38H3345.9°60.0°
C37C36N35H4218.1°0.1°
C14N13C12H39180.0°180.0°
C14N13C12C1194.2°180.0°
C14N13C12H1726.2°60.0°
C14N13C12H18145.4°60.0°
N13C14N15H40177.4°0.0°
N13C14N23H410.0°0.0°
C36N35C34H42122.0°179.9°
C36N35C34C2942.5°180.0°
C36N35C34N33131.5°0.1°
N35C36H28H29118.7°120.0°
N35C36C37H3087.2°59.9°
N35C36C37H3132.0°60.0°
N13C12C11H17120.4°120.0°
N13C12C11H18120.4°120.0°
N13C12C11C10117.1°180.0°
N13C12C11H153.5°60.0°
N13C12C11H16122.3°60.0°
N13C12H17H18118.8°120.0°
N35C34C29N287.6°0.6°
N35C34C29N33173.9°179.9°
N35C34C29C30174.0°179.9°
N35C34N33C32174.0°179.9°
C34N35C36H28135.7°60.0°
C34N35C36H2916.6°59.9°
C12C11C10H15120.6°120.0°
C12C11C10H16120.6°120.0°
C12C11C10S9162.2°180.0°
C12C11C10H677.4°60.0°
C12C11C10H741.9°60.0°
C12C11H15H16118.1°120.0°
C11C12H17H18118.8°120.0°
C11C12N13H3985.8°0.0°
N28C27N26H26180.0°179.7°
C27N28C29C34178.4°179.7°
C27N28C29C300.1°0.2°
N28C27N26C300.0°0.3°
N28C27N26C25177.8°179.8°
C29N28C27N260.0°0.0°
N28C29C34C30178.4°179.5°
N28C29C34N33178.4°179.5°
N28C29C30N260.1°0.4°
N28C29C30N31179.1°179.6°
C29N28C27H26180.0°179.7°
C27N26C30C290.0°0.4°
C27N26C30C25177.8°180.0°
C27N26C30N31179.0°179.6°
C27N26C25C543.7°95.0°
C27N26C25O2473.9°19.1°
C27N26C25H25165.9°142.1°
C11C10S9H6120.3°120.0°
C11C10S9H7120.3°120.0°
C11C10S9C8133.4°180.0°
C11C10H6H7119.0°120.0°
C10C11H15H16118.1°120.0°
C10C11C12H17122.5°60.0°
C10C11C12H183.3°60.0°
C34C29C30N26178.7°180.0°
C29C34N33C320.2°0.1°
C34C29C30N310.3°0.0°
C29C34N35H4279.5°0.1°
N33C34C29C300.0°0.1°
C34N33C32N310.3°0.0°
C34N33C32H27179.7°180.0°
N33C34N35H42106.6°180.0°
C29C30N26N31179.0°180.0°
C29C30N26C25177.8°179.7°
C29C30N31C320.3°0.1°
O6C5C25N2685.3°86.3°
O6C5C25C4120.3°118.2°
O6C5C25H2122.8°123.6°
O6C5C4H2126.0°123.6°
O6C5C25O24154.6°155.2°
O6C5C4O37.8°20.4°
O6C5C4C7128.9°139.1°
O6C5C4H1115.6°102.2°
O6C5C25H2537.4°36.7°
C30N26C25C5138.9°85.0°
C30N26C25O24103.4°160.9°
N26C30N31C32178.5°180.0°
C30N26C25H2516.7°38.0°
C30N26C27H26180.0°180.0°
C25N26C30N311.2°0.4°
N26C25C5O24120.0°118.5°
N26C25C5H25122.7°123.0°
N26C25C5C4154.3°155.6°
N26C25O24H25119.7°123.0°
N26C25O24C7168.2°158.6°
N26C25C5H237.5°37.3°
C25N26C27H262.2°0.1°
N33C32N31C300.0°0.0°
N33C32N31H27180.0°180.0°
C30N31C32H27180.0°180.0°
C25C5C4H2117.1°118.2°
C5C25O24H25116.2°118.5°
C25C5C4O3109.0°97.8°
C25C5C4C712.1°20.9°
C5C25O24C744.2°40.1°
C25C5C4H1127.5°139.6°
C25C5O6H44180.0°179.9°
C4C5C25O2434.3°37.0°
C5C4O3C7117.4°114.7°
C5C4O3H1122.6°122.7°
C5C4C7H1115.3°118.8°
C5C4C7O2413.1°2.1°
C5C4C7C8133.6°121.4°
C5C4C7H3105.5°117.6°
C4C5C25H2583.0°81.5°
C5C4O3H43180.0°65.2°
C4C5O6H4466.8°67.3°
C10S9C8C7101.0°180.0°
C10S9C8H418.8°60.0°
C10S9C8H5139.1°60.0°
S9C10H6H7119.0°120.0°
S9C10C11H1541.6°60.0°
S9C10C11H1677.2°60.0°
C25O24C7C435.7°26.5°
C25O24C7C8156.7°145.9°
O24C25C5H282.6°81.2°
C25O24C7H382.1°93.0°
O3C4C7H1120.8°122.5°
O3C4C7O24137.0°120.7°
O3C4C7C8102.6°119.9°
O3C4C5H2133.8°144.0°
O3C4C7H318.3°1.1°
C4C7C8S984.1°175.0°
C4C7O24C8121.0°119.4°
C4C7O24H3117.8°119.6°
C4C7C8H3120.8°121.0°
C7C4C5H2105.1°97.3°
C4C7C8H435.7°55.0°
C4C7C8H5156.0°65.0°
C7C4O3H4362.6°179.9°
S9C8C7O2433.3°67.2°
S9C8C7H4119.9°120.0°
S9C8C7H5119.9°120.0°
S9C8C7H3155.1°54.0°
S9C8H4H5120.3°120.1°
C8S9C10H613.0°60.0°
C8S9C10H7106.4°60.0°
O24C7C8H3121.8°121.2°
O24C7C4H1102.2°116.7°
O24C7C8H4153.2°172.9°
O24C7C8H586.5°52.8°
C7O24C25H2572.0°78.4°
C8C7C4H118.3°2.7°
C7C8H4H5120.4°120.0°
H1C4C5H210.4°21.4°
H1C4C7H3139.2°123.6°
H1C4O3H4357.4°57.5°
H2C5C25H25160.1°160.3°
H2C5O6H4458.2°56.3°
H3C7C8H485.0°66.0°
H3C7C8H535.2°174.0°
H6C10C11H15161.9°60.0°
H6C10C11H1643.2°180.0°
H7C10C11H1578.7°180.0°
H7C10C11H16162.5°60.0°
H8C17C22H13134.2°60.0°
H8C17C22H1415.1°180.0°
H8C17C16H19133.9°65.0°
H8C17C16H20107.1°175.0°
H8C17C18H2174.4°180.0°
H8C17C18H2245.0°60.0°
H9C20C21H1146.1°60.0°
H9C20C21H1273.4°60.0°
H9C20C19H2313.2°60.0°
H9C20C19H24132.6°59.9°
H10C20C21H11165.7°60.0°
H10C20C21H1246.2°180.0°
H10C20C19H23106.4°180.0°
H10C20C19H2413.0°60.0°
H11C21C22H13179.2°60.0°
H11C21C22H1461.7°60.0°
H12C21C22H1361.3°60.0°
H12C21C22H1457.8°180.0°
H15C11C12H17116.8°180.0°
H15C11C12H18124.0°60.0°
H16C11C12H171.9°60.0°
H16C11C12H18117.3°180.0°
H17C12N13H39153.8°120.0°
H18C12N13H3934.6°120.0°
H19C16N15H40153.8°119.9°
H20C16N15H4087.2°120.0°
H21C18C19H2356.5°NaN°
H21C18C19H2462.9°60.1°
H22C18C19H2362.8°60.0°
H22C18C19H24177.8°59.9°
H28C36C37H30152.4°60.1°
H28C36C37H3188.5°180.0°
H28C36N35H42102.3°120.1°
H29C36C37H3033.3°180.0°
H29C36C37H31152.4°60.0°
H29C36N35H42138.5°119.9°
H30C37C38H3276.3°180.0°
H30C37C38H33166.4°60.0°
H31C37C38H3242.9°60.0°
H31C37C38H3374.5°180.0°
H34C40C41H350.0°0.0°
H35C41C42H360.0°0.1°
H36C42C43H370.0°0.0°
H37C43C44H380.0°0.2°

222415

PDB entries from 2024-07-10

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