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YB1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.35Å1.34Å
N1C21sing1.49Å1.53Å
N1C24sing1.50Å1.47Å
C2O3doub1.22Å1.23Å
C2C4sing1.48Å1.51Å
C4C5doub1.40Å1.40ÅAromatic
C4C9sing1.40Å1.44ÅAromatic
C5C6sing1.39Å1.40ÅAromatic
C6N7doub1.32Å1.34ÅAromatic
C6O13sing1.36Å1.34Å
N7C8sing1.32Å1.37ÅAromatic
C8C9doub1.38Å1.40ÅAromatic
C8C10sing1.51Å1.49Å
C10C11sing1.53Å1.53Å
C10C12sing1.53Å1.54Å
C11C12sing1.53Å1.53Å
O13C14sing1.43Å1.43Å
C14C15sing1.53Å1.55Å
C15C16sing1.53Å1.53Å
C15C20sing1.53Å1.53Å
C16C17sing1.53Å1.58Å
C17O18sing1.43Å1.43Å
O18C19sing1.43Å1.44Å
C19C20sing1.53Å1.57Å
C21C22sing1.50Å1.53Å
C22C23sing1.58Å1.55Å
C22C27sing1.51Å1.56Å
C23C24sing1.51Å1.53Å
C23C25sing1.50Å1.53Å
C25N26sing1.49Å1.49Å
N26C27sing1.50Å1.50Å
N26C28sing1.35Å1.40Å
C28O29doub1.21Å1.25Å
C28C30sing1.51Å1.54Å
C30C31sing1.53Å1.55Å
C31C32sing1.51Å1.53Å
C32C33doub1.35Å1.40ÅAromatic
C32N36sing1.35Å1.42ÅAromatic
C33N34sing1.34Å1.44ÅAromatic
N34N35doub1.29Å1.26ÅAromatic
N35N36sing1.29Å1.40ÅAromatic
C10H41sing1.09Å1.10Å
C11H43sing1.09Å1.10Å
C11H42sing1.09Å1.10Å
C15H48sing1.09Å1.10Å
C16H50sing1.09Å1.10Å
C16H49sing1.09Å1.10Å
C17H51sing1.09Å1.10Å
C17H52sing1.09Å1.10Å
C19H54sing1.09Å1.10Å
C19H53sing1.09Å1.10Å
C20H56sing1.09Å1.10Å
C20H55sing1.09Å1.10Å
C21H58sing1.09Å1.10Å
C21H57sing1.09Å1.10Å
C22H38sing1.09Å1.10Å
C23H37sing1.09Å1.10Å
C24H59sing1.09Å1.10Å
C24H60sing1.09Å1.10Å
C25H61sing1.09Å1.10Å
C25H62sing1.09Å1.10Å
C27H64sing1.09Å1.10Å
C27H63sing1.09Å1.10Å
C5H39sing1.08Å1.08Å
C9H40sing1.08Å1.08Å
C12H45sing1.09Å1.10Å
C12H44sing1.09Å1.10Å
C14H47sing1.09Å1.10Å
C14H46sing1.09Å1.10Å
C30H66sing1.09Å1.10Å
C30H65sing1.09Å1.10Å
C31H67sing1.09Å1.10Å
C31H68sing1.09Å1.10Å
C33H69sing1.08Å1.08Å
N36H70sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C21123.1°126.1°
C2N1C24123.8°126.1°
N1C2O3120.4°120.0°
N1C2C4119.4°120.0°
C21N1C24113.0°107.7°
N1C21C22100.6°104.8°
N1C21H58111.6°110.4°
N1C21H57111.6°110.5°
N1C24C23101.3°102.2°
N1C24H59111.5°110.9°
N1C24H60111.5°111.0°
O3C2C4120.2°120.0°
C2C4C5122.9°120.9°
C2C4C9115.9°120.9°
C5C4C9120.9°118.2°
C4C5C6115.5°118.9°
C4C5H39122.3°120.5°
C4C9C8117.4°119.1°
C4C9H40121.3°120.5°
C5C6N7126.1°120.8°
C5C6O13115.9°119.6°
C6C5H39122.2°120.5°
N7C6O13118.0°119.6°
C6N7C8117.7°121.9°
C6O13C14118.5°117.0°
N7C8C9122.4°121.0°
N7C8C10114.6°119.5°
C9C8C10122.9°119.5°
C8C9H40121.3°120.4°
C8C10C11119.0°117.5°
C8C10C12117.8°117.5°
C8C10H41116.6°115.6°
C11C10C1259.6°60.0°
C10C11C1260.6°60.0°
C11C10H41115.9°117.5°
C10C11H43119.9°117.5°
C10C11H42119.9°117.5°
C10C12C1159.9°60.0°
C12C10H41115.7°117.5°
C10C12H45120.0°117.5°
C10C12H44120.0°117.4°
C12C11H43119.9°117.5°
C12C11H42119.9°117.6°
C11C12H45120.0°117.5°
C11C12H44120.0°117.5°
O13C14C15106.4°109.5°
O13C14H47110.2°109.5°
O13C14H46110.3°109.5°
C14C15C16109.1°109.6°
C14C15C20105.7°109.5°
C14C15H48111.4°109.7°
C15C14H47110.3°109.4°
C15C14H46110.2°109.5°
C16C15C20106.9°109.0°
C15C16C17109.7°109.2°
C16C15H48111.8°109.5°
C15C16H50109.4°109.5°
C15C16H49109.4°109.5°
C15C20C19106.4°109.2°
C20C15H48111.6°109.5°
C15C20H56110.2°109.5°
C15C20H55110.2°109.5°
C16C17O18111.3°109.4°
C17C16H50109.4°109.5°
C17C16H49109.4°109.5°
C16C17H51109.0°109.5°
C16C17H52109.0°109.5°
C17O18C19112.7°114.1°
O18C17H51109.0°109.5°
O18C17H52109.0°109.5°
O18C19C20108.4°109.4°
O18C19H54109.7°109.4°
O18C19H53109.7°109.5°
C20C19H54109.7°109.5°
C20C19H53109.7°109.5°
C19C20H56110.2°109.6°
C19C20H55110.2°109.5°
C21C22C23104.0°99.7°
C21C22C27127.3°126.6°
C22C21H58111.6°110.3°
C22C21H57111.7°110.4°
C21C22H38108.6°110.1°
C23C22C2798.4°98.4°
C22C23C24102.6°98.5°
C22C23C2599.6°99.8°
C23C22H38108.4°110.0°
C22C23H37109.5°110.0°
C22C27N2697.2°102.2°
C27C22H38108.3°109.8°
C22C27H64112.5°110.9°
C22C27H63112.5°110.9°
C24C23C25124.1°126.6°
C24C23H37109.8°110.0°
C23C24H59111.5°110.9°
C23C24H60111.5°110.8°
C23C25N2699.9°104.8°
C25C23H37109.8°109.8°
C23C25H61111.8°110.4°
C23C25H62111.8°110.4°
C25N26C27112.8°107.8°
C25N26C28121.3°126.2°
N26C25H61111.8°110.4°
N26C25H62111.8°110.4°
C27N26C28125.8°126.1°
N26C27H64112.4°110.9°
N26C27H63112.4°111.0°
N26C28O29118.2°119.9°
N26C28C30118.0°120.0°
O29C28C30123.8°120.1°
C28C30C31109.7°109.4°
C28C30H66109.4°109.5°
C28C30H65109.4°109.4°
C30C31C32112.5°109.5°
C31C30H66109.4°109.5°
C31C30H65109.4°109.5°
C30C31H67108.7°109.5°
C30C31H68108.7°109.5°
C31C32C33131.4°126.9°
C31C32N36125.7°126.9°
C32C31H67108.7°109.4°
C32C31H68108.7°109.4°
C33C32N36102.8°106.2°
C32C33N34108.0°106.5°
C32C33H69126.0°126.7°
C32N36N35110.1°108.2°
C32N36H70124.9°125.9°
C33N34N35110.1°108.9°
N34C33H69126.0°126.8°
N34N35N36109.0°110.2°
N35N36H70124.9°125.9°
H43C11H42109.5°115.5°
H50C16H49109.5°109.6°
H51C17H52109.5°109.5°
H54C19H53109.5°109.5°
H56C20H55109.5°109.6°
H58C21H57109.5°110.4°
H59C24H60109.5°110.7°
H61C25H62109.5°110.4°
H64C27H63109.5°110.8°
H45C12H44109.5°115.6°
H47C14H46109.5°109.4°
H66C30H65109.5°109.5°
H67C31H68109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C21C24178.7°180.0°
N1C2O3C4178.4°180.0°
N1C2C4C5124.4°24.6°
N1C2C4C962.0°155.7°
C2N1C21C22172.7°172.5°
C2N1C24C23161.1°154.7°
C2N1C21H5868.7°53.7°
C2N1C21H5754.1°68.6°
C2N1C24H5980.3°36.5°
C2N1C24H6042.4°87.0°
C21N1C2O30.7°3.6°
C21N1C2C4179.1°176.4°
N1C21C22H58118.6°118.8°
N1C21C22H57118.6°119.0°
N1C21C22C2329.6°35.4°
N1C21C22C27142.0°143.6°
C21N1C24C2320.3°25.3°
N1C21H58H57124.1°122.4°
N1C21C22H3885.7°80.3°
C21N1C24H5998.4°143.5°
C21N1C24H60139.0°93.0°
C24N1C2O3179.2°176.4°
C24N1C2C42.4°3.6°
C24N1C21C225.9°7.5°
N1C24C23C2237.9°45.8°
N1C24C23H59118.7°118.2°
N1C24C23H60118.7°118.4°
N1C24C23C25148.9°154.7°
C24N1C21H58112.6°126.3°
C24N1C21H57124.5°111.4°
N1C24C23H3778.5°69.2°
N1C24H59H60123.8°123.7°
O3C2C4C557.2°155.4°
O3C2C4C9116.4°24.3°
C2C4C5C9173.3°179.7°
C2C4C5C6172.0°180.0°
C2C4C9C8172.3°179.7°
C2C4C5H397.9°0.0°
C2C4C9H407.7°0.0°
C4C5C6H39180.0°180.0°
C4C5C6N70.6°0.0°
C4C5C6O13177.1°180.0°
C5C4C9C81.5°0.5°
C5C4C9H40178.5°179.7°
C9C4C5C61.3°0.3°
C4C9C8N70.1°0.5°
C4C9C8H40180.0°179.8°
C4C9C8C10179.6°179.7°
C9C4C5H39178.8°179.8°
C5C6N7O13177.7°179.9°
C5C6N7C82.2°0.1°
C5C6O13C14178.4°180.0°
C6N7C8C91.9°0.2°
C6N7C8C10177.8°180.0°
N7C6O13C143.6°0.1°
N7C6C5H39179.3°179.9°
O13C6N7C8175.5°180.0°
C6O13C14C15178.4°180.0°
O13C6C5H392.9°0.0°
C6O13C14H4758.8°60.0°
C6O13C14H4662.1°60.0°
N7C8C9C10179.7°179.8°
N7C8C10C1127.6°95.1°
N7C8C10C1241.1°163.6°
N7C8C10H41174.5°50.7°
N7C8C9H40179.9°179.7°
C9C8C10C11152.1°84.7°
C9C8C10C12139.1°16.2°
C9C8C10H415.3°129.6°
C8C10C11C12107.0°107.5°
C8C10C11H41147.1°145.1°
C8C10C12H41144.7°145.1°
C8C10C11H43143.3°145.0°
C8C10C11H422.6°0.1°
C10C8C9H400.4°0.1°
C8C10C12H450.4°0.1°
C8C10C12H44141.5°145.0°
C11C10C12H41106.2°107.5°
C10C11C12H43109.6°107.5°
C10C11C12H42109.6°107.5°
C10C11H43H42144.4°145.6°
C11C10C12H45109.4°107.5°
C11C10C12H44109.4°107.5°
C10C12H45H44144.8°145.6°
C12C11H43H42144.5°145.8°
C11C12H45H44144.8°145.8°
O13C14C15H47119.5°120.0°
O13C14C15H46119.5°120.1°
O13C14C15C1668.8°175.0°
O13C14C15C20176.6°65.5°
O13C14C15H4855.1°54.7°
O13C14H47H46121.4°120.0°
C14C15C16C20113.8°119.9°
C14C15C16H48123.7°120.3°
C14C15C20H48121.3°120.3°
C14C15C16C17172.0°176.8°
C14C15C20C19180.0°176.8°
C14C15C16H5051.9°56.9°
C14C15C16H4968.0°63.2°
C14C15C20H5660.5°63.2°
C14C15C20H5560.5°57.0°
C15C14H47H46121.4°120.0°
C16C15C20H48122.5°119.8°
C15C16C17H50120.1°119.9°
C15C16C17H49120.0°119.9°
C15C16C17O1854.0°57.6°
C16C15C20C1963.8°56.9°
C15C16H50H49119.9°120.1°
C15C16C17H51174.3°177.6°
C15C16C17H5266.3°62.4°
C16C15C20H56176.7°176.9°
C16C15C20H5555.7°63.0°
C16C15C14H47171.7°55.0°
C16C15C14H4650.7°65.0°
C20C15C16C1758.1°56.9°
C15C20C19O1865.8°57.6°
C15C20C19H56119.5°119.9°
C15C20C19H55119.5°119.9°
C20C15C16H5061.9°63.0°
C20C15C16H49178.2°176.9°
C15C20C19H54174.3°62.4°
C15C20C19H5354.0°177.6°
C15C20H56H55121.4°120.1°
C20C15C14H4757.1°174.5°
C20C15C14H4663.9°54.6°
C16C17O18H51120.3°120.0°
C16C17O18H52120.3°120.0°
C16C17O18C1956.6°61.1°
C17C16C15H4864.3°62.8°
C17C16H50H49119.8°120.2°
C16C17H51H52119.1°120.0°
C17O18C19C2062.8°61.1°
O18C17C16H5066.1°62.3°
O18C17C16H49174.0°177.5°
O18C17H51H52119.2°120.0°
C17O18C19H54177.3°58.8°
C17O18C19H5357.0°178.8°
O18C19C20H54119.9°119.9°
O18C19C20H53119.8°120.1°
C19O18C17H51176.9°178.9°
C19O18C17H5263.6°58.9°
O18C19H54H53120.5°120.0°
O18C19C20H56174.6°177.5°
O18C19C20H5553.7°62.3°
C19C20C15H4858.7°62.9°
C20C19H54H53120.5°120.0°
C19C20H56H55121.4°120.2°
C21C22C23C27132.0°129.5°
C21C22C23H38115.4°115.7°
C21C22C27H38132.5°136.2°
C21C22C23C2443.4°50.4°
C21C22C23C25171.7°180.0°
C21C22C27N26161.6°154.7°
C22C21H58H57124.1°122.3°
C21C22C23H3773.2°64.6°
C21C22C27H6443.6°36.5°
C21C22C27H6380.5°87.0°
C23C22C27H38112.6°114.9°
C22C23C24C25111.0°108.9°
C22C23C24H37116.4°115.0°
C22C23C25H37114.9°115.6°
C22C23C25N2640.9°35.4°
C23C22C27N2646.7°45.8°
C23C22C21H5889.0°154.2°
C23C22C21H57148.2°83.6°
C22C23C24H5980.8°164.0°
C22C23C24H60156.6°72.6°
C22C23C25H6177.5°83.5°
C22C23C25H62159.3°154.2°
C23C22C27H6471.3°72.3°
C23C22C27H63164.6°164.2°
C27C22C23C24175.4°179.9°
C27C22C23C2556.3°50.4°
C22C27N26C2522.6°25.4°
C22C27N26H64118.0°118.2°
C22C27N26H63118.0°118.2°
C22C27N26C28154.6°154.6°
C27C22C21H5823.4°97.6°
C27C22C21H5799.5°24.7°
C27C22C23H3758.8°64.9°
C22C27H64H63125.8°123.5°
C24C23C25H37132.6°136.2°
C24C23C25N26153.4°143.7°
C24C23C22H3872.1°65.3°
C23C24H59H60123.8°123.5°
C24C23C25H6134.9°24.8°
C24C23C25H6288.2°97.5°
C23C25N26H61118.4°118.8°
C23C25N26H62118.4°118.8°
C23C25N26C2711.4°7.5°
C23C25N26C28171.2°172.6°
C25C23C22H3856.3°64.3°
C25C23C24H5930.2°87.0°
C25C23C24H6092.4°36.4°
C23C25H61H62124.5°122.3°
C25N26C27C28177.2°180.0°
C25N26C28O29176.9°0.0°
C25N26C28C302.7°180.0°
N26C25C23H3774.0°80.2°
N26C25H61H62124.5°122.3°
C25N26C27H6495.4°92.9°
C25N26C27H63140.5°143.6°
C27N26C28O296.1°180.0°
C27N26C28C30174.3°0.0°
N26C27C22H3866.0°69.1°
C27N26C25H61107.0°111.4°
C27N26C25H62129.8°126.3°
N26C27H64H63125.7°123.7°
N26C28O29C30179.6°180.0°
N26C28C30C31138.5°180.0°
C28N26C25H6170.4°68.6°
C28N26C25H6252.9°53.8°
C28N26C27H6487.4°87.1°
C28N26C27H6336.7°36.4°
N26C28C30H6618.4°60.0°
N26C28C30H65101.5°60.0°
O29C28C30C3141.9°0.0°
O29C28C30H66162.0°120.0°
O29C28C30H6578.1°120.0°
C28C30C31H66120.0°120.0°
C28C30C31H65120.0°119.9°
C28C30C31C32164.8°180.0°
C28C30H66H65119.9°120.0°
C28C30C31H6774.8°60.0°
C28C30C31H6844.3°60.0°
C30C31C32H67120.4°120.0°
C30C31C32H68120.5°120.0°
C30C31C32C3390.3°85.0°
C30C31C32N3694.9°95.3°
C31C30H66H65119.9°120.1°
C30C31H67H68118.6°120.1°
C31C32C33N36175.7°179.8°
C31C32C33N34174.4°179.9°
C31C32N36N35175.0°179.9°
C32C31C30H6644.7°60.0°
C32C31C30H6575.2°60.1°
C32C31H67H68118.6°119.9°
C31C32C33H695.6°0.0°
C31C32N36H705.0°0.1°
C32C33N34H69180.0°179.9°
C32C33N34N351.2°0.1°
C33C32N36N351.0°0.4°
C33C32C31H67149.3°35.0°
C33C32C31H6830.2°155.0°
C33C32N36H70179.0°179.8°
N36C32C33N341.3°0.2°
C32N36N35N340.3°0.4°
C32N36N35H70180.0°179.8°
N36C32C31H6725.6°144.7°
N36C32C31H68144.6°24.7°
N36C32C33H69178.7°179.7°
C33N34N35N360.5°0.3°
N35N34C33H69178.8°180.0°
N34N35N36H70179.7°179.8°
H41C10C11H433.7°0.0°
H41C10C11H42144.4°145.0°
H41C10C12H45144.4°145.0°
H41C10C12H443.2°0.0°
H43C11C12H45141.0°145.1°
H43C11C12H440.2°0.0°
H42C11C12H450.2°0.0°
H42C11C12H44141.0°145.1°
H48C15C16H50175.6°177.3°
H48C15C16H4955.7°57.1°
H48C15C20H5660.8°57.1°
H48C15C20H55178.2°177.3°
H48C15C14H4764.4°65.2°
H48C15C14H46174.7°174.8°
H50C16C17H5154.2°57.7°
H50C16C17H52173.7°177.7°
H49C16C17H5165.7°62.5°
H49C16C17H5253.8°57.5°
H54C19C20H5654.8°57.5°
H54C19C20H5566.2°177.7°
H53C19C20H5665.6°62.5°
H53C19C20H55173.5°57.8°
H58C21C22H38155.8°38.5°
H57C21C22H3832.9°160.8°
H38C22C23H37171.4°179.7°
H38C22C27H64176.1°172.7°
H38C22C27H6352.0°49.2°
H37C23C24H59162.8°49.0°
H37C23C24H6040.2°172.4°
H37C23C25H61167.6°161.0°
H37C23C25H6244.4°38.6°
H66C30C31H67165.2°180.0°
H66C30C31H6875.8°59.9°
H65C30C31H6745.2°59.9°
H65C30C31H68164.3°180.0°

250835

PDB entries from 2026-03-18

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