Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

Y8K

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1S2sing1.66Å1.63Å
S2O3doub1.42Å1.47Å
S2O4doub1.42Å1.42Å
S2C5sing1.76Å1.71Å
C5C6doub1.38Å1.44ÅAromatic
C5C10sing1.38Å1.45ÅAromatic
C6C7sing1.38Å1.41ÅAromatic
C7C8doub1.40Å1.39ÅAromatic
C8C9sing1.40Å1.43ÅAromatic
C8C11sing1.48Å1.50Å
C9C10doub1.38Å1.41ÅAromatic
C11O12doub1.22Å1.24Å
C11N13sing1.35Å1.36Å
N13C14sing1.49Å1.51Å
N13C35sing1.50Å1.50Å
C14C15sing1.49Å1.51Å
C15C16sing1.49Å1.52Å
C15C34sing1.58Å1.59Å
C15C37sing1.53Å1.57Å
C16N17sing1.49Å1.50Å
N17C18sing1.35Å1.38Å
N17C33sing1.50Å1.51Å
C18O19sing1.35Å1.42Å
C18O32doub1.22Å1.24Å
O19C20sing1.45Å1.43Å
C20C21sing1.51Å1.53Å
C21C22doub1.38Å1.42ÅAromatic
C21C31sing1.38Å1.42ÅAromatic
C22C23sing1.38Å1.38ÅAromatic
C23C24doub1.39Å1.41ÅAromatic
C24O25sing1.36Å1.39Å
C24C30sing1.39Å1.41ÅAromatic
O25C26sing1.43Å1.38Å
C26F27sing1.40Å1.36Å
C26F28sing1.40Å1.31Å
C26F29sing1.40Å1.32Å
C30C31doub1.38Å1.41ÅAromatic
C33C34sing1.51Å1.49Å
C34C35sing1.51Å1.53Å
C10H43sing1.08Å1.08Å
C16H46sing1.09Å1.10Å
C16H47sing1.09Å1.10Å
C20H48sing1.09Å1.10Å
C20H49sing1.09Å1.10Å
C22H50sing1.08Å1.08Å
C23H51sing1.08Å1.08Å
N1H38sing0.97Å1.00Å
N1H39sing0.97Å1.00Å
C6H40sing1.08Å1.08Å
C7H41sing1.08Å1.08Å
C9H42sing1.08Å1.08Å
C14H44sing1.09Å1.10Å
C14H45sing1.09Å1.10Å
C30H52sing1.08Å1.08Å
C31H53sing1.08Å1.08Å
C33H54sing1.09Å1.10Å
C33H55sing1.09Å1.10Å
C34H36sing1.09Å1.10Å
C35H57sing1.09Å1.10Å
C35H56sing1.09Å1.10Å
C37H60sing1.09Å1.10Å
C37H58sing1.09Å1.10Å
C37H59sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1S2O3108.3°106.4°
N1S2O4107.2°106.4°
N1S2C5105.9°107.2°
S2N1H38109.5°120.0°
S2N1H39109.5°120.0°
O3S2O4120.2°123.2°
O3S2C5108.9°106.4°
O4S2C5105.4°106.4°
S2C5C6121.7°119.8°
S2C5C10120.4°119.8°
C6C5C10117.9°120.3°
C5C6C7121.3°120.1°
C5C6H40119.3°119.9°
C5C10C9120.5°120.1°
C5C10H43119.7°119.9°
C6C7C8119.5°119.8°
C7C6H40119.4°119.9°
C6C7H41120.3°120.1°
C7C8C9121.9°119.7°
C7C8C11121.7°120.1°
C8C7H41120.2°120.1°
C9C8C11116.3°120.2°
C8C9C10118.9°119.9°
C8C9H42120.5°120.0°
C8C11O12120.3°120.0°
C8C11N13122.5°120.0°
C9C10H43119.7°119.9°
C10C9H42120.6°120.1°
O12C11N13117.2°120.0°
C11N13C14117.3°126.1°
C11N13C35129.0°126.2°
C14N13C35113.6°107.7°
N13C14C15103.0°104.6°
N13C14H44111.0°110.4°
N13C14H45111.0°110.4°
N13C35C3496.2°102.4°
N13C35H57112.7°110.8°
N13C35H56112.7°110.8°
C14C15C16122.9°129.3°
C14C15C34101.5°100.7°
C14C15C37105.6°107.9°
C15C14H44111.1°110.4°
C15C14H45111.1°110.4°
C16C15C3498.9°100.7°
C16C15C37109.6°108.6°
C15C16N1798.6°104.6°
C15C16H46112.1°110.4°
C15C16H47112.1°110.4°
C34C15C37118.9°107.5°
C15C34C33101.8°97.8°
C15C34C35103.3°97.8°
C15C34H36106.5°111.8°
C15C37H60109.5°109.5°
C15C37H58109.5°109.5°
C15C37H59109.5°109.5°
C16N17C18121.6°126.1°
C16N17C33114.5°107.8°
N17C16H46112.1°110.4°
N17C16H47112.1°110.4°
C18N17C33123.5°126.1°
N17C18O19111.1°120.0°
N17C18O32122.0°120.0°
N17C33C3497.8°102.4°
N17C33H54112.3°110.8°
N17C33H55112.3°110.8°
O19C18O32126.9°120.0°
C18O19C20123.7°117.0°
O19C20C21107.6°109.4°
O19C20H48109.9°109.5°
O19C20H49109.9°109.5°
C20C21C22118.8°120.0°
C20C21C31121.1°119.9°
C21C20H48109.9°109.5°
C21C20H49110.0°109.5°
C22C21C31120.0°120.1°
C21C22C23120.9°120.0°
C21C22H50119.6°119.9°
C21C31C30119.6°120.0°
C21C31H53120.2°119.9°
C22C23C24118.4°120.0°
C23C22H50119.6°120.0°
C22C23H51120.8°120.0°
C23C24O25112.5°120.1°
C23C24C30122.5°119.8°
C24C23H51120.8°120.0°
O25C24C30124.9°120.1°
C24O25C26121.4°117.0°
C24C30C31118.6°120.0°
C24C30H52120.7°120.0°
O25C26F27114.1°109.4°
O25C26F28108.9°109.5°
O25C26F29109.7°109.5°
F27C26F28106.0°109.5°
F27C26F29112.2°109.5°
F28C26F29105.4°109.5°
C31C30H52120.7°120.0°
C30C31H53120.2°120.1°
C33C34C35128.3°124.1°
C34C33H54112.3°110.9°
C34C33H55112.3°110.8°
C33C34H36107.7°111.2°
C35C34H36107.3°111.7°
C34C35H57112.7°110.9°
C34C35H56112.7°110.8°
H46C16H47109.5°110.5°
H48C20H49109.5°109.5°
H38N1H39109.4°120.0°
H44C14H45109.5°110.4°
H54C33H55109.5°110.9°
H57C35H56109.4°110.8°
H60C37H58109.4°109.5°
H60C37H59109.5°109.5°
H58C37H59109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1S2O3O4123.6°123.0°
N1S2O3C5114.8°114.1°
N1S2O4C5112.5°114.1°
N1S2C5C699.6°90.0°
N1S2C5C1083.0°90.0°
S2N1H38H39120.0°180.0°
O3S2O4C5123.4°122.9°
O3S2C5C616.7°23.5°
O3S2C5C10160.7°156.5°
O3S2N1H38180.0°6.5°
O3S2N1H3960.0°173.5°
O4S2C5C6147.0°156.4°
O4S2C5C1030.5°23.5°
O4S2N1H3848.9°126.5°
O4S2N1H3971.1°53.6°
S2C5C6C10177.5°180.0°
S2C5C6C7177.0°180.0°
S2C5C10C9177.1°179.7°
S2C5C10H432.9°0.1°
C5S2N1H3863.3°120.0°
C5S2N1H39176.7°60.0°
S2C5C6H403.0°0.1°
C5C6C7H40180.0°179.9°
C5C6C7C80.5°0.0°
C6C5C10C90.4°0.2°
C6C5C10H43179.6°179.9°
C5C6C7H41179.5°179.9°
C10C5C6C70.5°0.0°
C5C10C9C80.3°0.6°
C5C10C9H43180.0°179.7°
C10C5C6H40179.5°179.9°
C5C10C9H42179.7°180.0°
C6C7C8H41180.0°179.9°
C6C7C8C90.4°0.4°
C6C7C8C11177.6°180.0°
C7C8C9C11178.1°179.7°
C7C8C9C100.3°0.7°
C7C8C11O12113.0°25.9°
C7C8C11N1367.5°154.2°
C8C7C6H40179.5°179.9°
C7C8C9H42179.7°180.0°
C8C9C10H42180.0°179.4°
C9C8C11O1265.1°153.8°
C9C8C11N13114.4°26.2°
C8C9C10H43179.7°179.7°
C9C8C7H41179.6°179.7°
C11C8C9C10177.8°179.7°
C8C11O12N13179.5°180.0°
C8C11N13C14178.7°177.3°
C8C11N13C351.5°2.7°
C11C8C7H412.4°0.1°
C11C8C9H422.2°0.3°
O12C11N13C140.8°2.7°
O12C11N13C35178.0°177.3°
C11N13C14C35177.6°180.0°
C11N13C14C15173.2°173.3°
C11N13C35C34146.1°154.1°
C11N13C14H4454.2°54.4°
C11N13C14H4567.8°68.0°
C11N13C35H5796.2°87.6°
C11N13C35H5628.3°35.9°
N13C14C15H44118.9°118.8°
N13C14C15H45118.9°118.8°
N13C14C15C16132.4°148.4°
N13C14C15C3423.7°35.0°
N13C14C15C37101.0°77.5°
C14N13C35C3431.2°25.8°
N13C14H44H45123.0°122.4°
C14N13C35H5786.6°92.4°
C14N13C35H56149.0°144.1°
C35N13C14C154.4°6.8°
N13C35C34C1544.4°45.6°
N13C35C34C33161.4°150.6°
N13C35C34H57117.8°118.2°
N13C35C34H56117.8°118.2°
C35N13C14H44123.4°125.6°
C35N13C14H45114.6°112.0°
N13C35C34H3668.0°71.6°
N13C35H57H56126.2°123.5°
C14C15C16C34110.0°113.4°
C14C15C16C37124.8°133.9°
C14C15C34C37115.3°112.8°
C14C15C16N17151.0°148.4°
C14C15C34C33179.1°176.2°
C14C15C34C3544.7°50.0°
C14C15C16H4632.8°29.6°
C14C15C16H4790.8°92.9°
C15C14H44H45123.1°122.4°
C14C15C34H3668.2°67.1°
C14C15C37H60180.0°77.3°
C14C15C37H5860.0°42.8°
C14C15C37H5960.0°162.7°
C16C15C34C37118.4°113.5°
C15C16N17H46118.2°118.8°
C15C16N17H47118.2°118.7°
C15C16N17C18169.9°173.2°
C15C16N17C3317.7°6.8°
C16C15C34C3354.5°50.1°
C16C15C34C35171.0°176.3°
C15C16H46H47125.1°122.4°
C16C15C14H4413.5°92.8°
C16C15C14H45108.7°29.6°
C16C15C34H3658.2°66.6°
C16C15C37H6045.7°66.8°
C16C15C37H5874.3°173.1°
C16C15C37H59165.7°53.2°
C34C15C16N1741.0°35.0°
C15C34C33N1740.9°45.6°
C15C34C33C35117.7°105.0°
C15C34C33H36111.8°117.1°
C15C34C35H36112.3°117.3°
C34C15C16H4677.2°83.7°
C34C15C16H47159.2°153.8°
C34C15C14H4495.2°153.8°
C34C15C14H45142.7°83.8°
C15C34C33H54159.0°163.8°
C15C34C33H5577.1°72.6°
C15C34C35H5773.4°72.6°
C15C34C35H56162.1°163.8°
C34C15C37H6067.0°174.9°
C34C15C37H58173.0°65.0°
C34C15C37H5953.1°54.9°
C37C15C16N1784.2°77.7°
C37C15C34C3363.9°63.5°
C37C15C34C3570.6°62.8°
C37C15C16H46157.6°163.5°
C37C15C16H4734.0°41.0°
C37C15C14H44140.1°41.3°
C37C15C14H4517.9°163.7°
C37C15C34H36176.5°179.9°
C15C37H60H58120.0°120.0°
C15C37H60H59120.0°120.0°
C15C37H58H59120.0°120.0°
C16N17C18C33171.7°180.0°
C16N17C18O19178.9°180.0°
C16N17C18O322.3°0.0°
C16N17C33C3415.6°25.8°
N17C16H46H47125.1°122.4°
C16N17C33H54133.6°144.0°
C16N17C33H55102.5°92.4°
N17C18O19O32178.7°180.0°
N17C18O19C20178.7°180.0°
C18N17C33C34156.6°154.2°
C18N17C16H4671.9°68.0°
C18N17C16H4751.7°54.5°
C18N17C33H5438.6°35.9°
C18N17C33H5585.3°87.6°
C33N17C18O199.4°0.0°
C33N17C18O32169.4°180.0°
N17C33C34H54118.1°118.2°
N17C33C34H55118.1°118.2°
N17C33C34C35158.7°150.6°
C33N17C16H46100.5°112.0°
C33N17C16H47135.9°125.5°
N17C33H54H55125.5°123.5°
N17C33C34H3670.9°71.5°
C18O19C20C21178.7°180.0°
C18O19C20H4861.6°60.0°
C18O19C20H4959.0°60.0°
O32C18O19C202.6°0.0°
O19C20C21H48119.7°120.0°
O19C20C21H49119.7°120.0°
O19C20C21C22117.2°90.0°
O19C20C21C3165.3°90.3°
O19C20H48H49120.9°120.0°
C20C21C22C31177.5°179.6°
C20C21C22C23176.8°180.0°
C20C21C31C30176.4°179.8°
C21C20H48H49120.9°120.0°
C20C21C22H503.2°0.1°
C20C21C31H533.6°0.0°
C21C22C23H50180.0°179.9°
C21C22C23C240.1°0.1°
C22C21C31C301.1°0.6°
C22C21C20H482.5°150.0°
C22C21C20H49123.1°29.9°
C21C22C23H51179.9°180.0°
C22C21C31H53178.9°179.7°
C31C21C22C230.7°0.4°
C21C31C30C240.6°0.5°
C21C31C30H53180.0°179.7°
C31C21C20H48175.0°29.7°
C31C21C20H4954.4°149.7°
C31C21C22H50179.2°179.7°
C21C31C30H52179.4°179.7°
C22C23C24H51180.0°179.9°
C22C23C24O25179.6°180.0°
C22C23C24C300.6°0.0°
C23C24O25C30179.8°180.0°
C23C24O25C2684.6°180.0°
C23C24C30C310.3°0.2°
C24C23C22H50179.9°180.0°
C23C24C30H52179.7°179.9°
C24O25C26F2765.6°60.1°
C24O25C26F28176.3°180.0°
C24O25C26F2961.4°60.0°
O25C24C30C31179.9°179.8°
O25C24C23H510.5°0.0°
O25C24C30H520.1°0.1°
C30C24O25C2695.6°0.0°
C24C30C31H52180.0°179.8°
C30C24C23H51179.4°180.0°
C24C30C31H53179.4°179.7°
O25C26F27F28119.8°120.0°
O25C26F27F29125.7°120.0°
O25C26F28F29117.7°120.0°
F27C26F28F29119.1°120.0°
C33C34C35H36130.6°137.7°
C34C33H54H55125.5°123.5°
C33C34C35H5743.7°32.4°
C33C34C35H5680.8°91.2°
C35C34C33H5483.3°91.2°
C35C34C33H5540.6°32.4°
C34C35H57H56126.2°123.5°
H43C10C9H420.3°0.4°
H50C22C23H510.1°0.1°
H40C6C7H410.5°0.0°
H52C30C31H530.6°0.1°
H54C33C34H3647.2°46.7°
H55C33C34H36171.1°170.3°
H36C34C35H57174.2°170.1°
H36C34C35H5649.8°46.6°
H60C37H58H59119.9°120.0°

251801

PDB entries from 2026-04-08

PDB statisticsPDBj update infoContact PDBjnumon