Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

Y85

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.38Å1.41ÅAromatic
C1C6sing1.39Å1.39ÅAromatic
C2N3sing1.32Å1.40ÅAromatic
C2C7sing1.51Å1.53Å
N3C4doub1.32Å1.37ÅAromatic
C4C5sing1.38Å1.41ÅAromatic
C5C6doub1.39Å1.39ÅAromatic
C7O8sing1.43Å1.47Å
O8C13sing1.36Å1.35Å
C9C10sing1.38Å1.37ÅAromatic
C9C14doub1.38Å1.40ÅAromatic
C10C11doub1.38Å1.41ÅAromatic
C10CL19sing1.74Å1.71Å
C11C12sing1.38Å1.39ÅAromatic
C11C20sing1.51Å1.52Å
C12C13doub1.39Å1.42ÅAromatic
C13C14sing1.39Å1.42ÅAromatic
C14C15sing1.51Å1.50Å
C15C16sing1.53Å1.54Å
C15C17sing1.53Å1.54Å
C15C18sing1.53Å1.54Å
C16H30sing1.09Å1.10Å
C16H31sing1.09Å1.10Å
C16H29sing1.09Å1.10Å
C17H34sing1.09Å1.10Å
C17H33sing1.09Å1.10Å
C17H32sing1.09Å1.10Å
C18H37sing1.09Å1.10Å
C18H35sing1.09Å1.10Å
C18H36sing1.09Å1.10Å
C20H38sing1.09Å1.10Å
C20H39sing1.09Å1.10Å
C20H40sing1.09Å1.10Å
C1H21sing1.08Å1.08Å
C4H22sing1.08Å1.08Å
C5H23sing1.08Å1.08Å
C6H24sing1.08Å1.08Å
C7H26sing1.09Å1.10Å
C7H25sing1.09Å1.10Å
C9H27sing1.08Å1.08Å
C12H28sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6118.6°119.2°
C1C2N3122.6°120.8°
C1C2C7124.1°119.6°
C2C1H21120.7°120.4°
C1C6C5120.9°118.4°
C6C1H21120.7°120.4°
C1C6H24119.6°120.8°
N3C2C7113.3°119.6°
C2N3C4116.1°121.7°
C2C7O8110.2°109.5°
C2C7H26109.3°109.5°
C2C7H25109.3°109.5°
N3C4C5124.4°120.7°
N3C4H22117.8°119.6°
C4C5C6117.5°119.2°
C5C4H22117.8°119.6°
C4C5H23121.3°120.4°
C6C5H23121.2°120.4°
C5C6H24119.6°120.8°
C7O8C13116.7°117.0°
O8C7H26109.3°109.4°
O8C7H25109.3°109.5°
O8C13C12122.1°120.0°
O8C13C14115.0°120.1°
C10C9C14120.5°120.1°
C9C10C11124.2°120.1°
C9C10CL19116.0°120.0°
C10C9H27119.7°120.0°
C9C14C13116.0°119.9°
C9C14C15120.7°120.0°
C14C9H27119.7°120.0°
C11C10CL19119.9°120.0°
C10C11C12117.1°120.1°
C10C11C20122.5°120.0°
C12C11C20120.4°119.9°
C11C12C13119.3°119.9°
C11C12H28120.4°120.1°
C11C20H38109.5°109.5°
C11C20H39109.5°109.5°
C11C20H40109.5°109.5°
C12C13C14122.9°119.9°
C13C12H28120.3°120.0°
C13C14C15123.3°120.0°
C14C15C16111.3°109.5°
C14C15C17111.1°109.5°
C14C15C18110.5°109.5°
C16C15C17108.9°109.5°
C16C15C18108.1°109.4°
C15C16H30109.5°109.4°
C15C16H31109.5°109.5°
C15C16H29109.5°109.5°
C17C15C18106.9°109.5°
C15C17H34109.5°109.5°
C15C17H33109.5°109.4°
C15C17H32109.5°109.4°
C15C18H37109.5°109.5°
C15C18H35109.5°109.5°
C15C18H36109.5°109.5°
H30C16H31109.5°109.4°
H30C16H29109.5°109.5°
H31C16H29109.5°109.5°
H34C17H33109.4°109.5°
H34C17H32109.5°109.5°
H33C17H32109.5°109.5°
H37C18H35109.5°109.5°
H37C18H36109.4°109.5°
H35C18H36109.5°109.5°
H38C20H39109.5°109.5°
H38C20H40109.4°109.4°
H39C20H40109.5°109.5°
H26C7H25109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H21180.0°179.7°
C1C2N3C7179.2°179.9°
C1C2N3C40.7°0.1°
C2C1C6C50.2°0.0°
C1C2C7O872.8°0.1°
C2C1C6H24179.7°180.0°
C1C2C7H2647.3°120.0°
C1C2C7H25167.1°119.9°
C6C1C2N30.5°0.1°
C6C1C2C7179.5°180.0°
C1C6C5C40.7°0.0°
C1C6C5H24180.0°180.0°
C1C6C5H23179.3°180.0°
C2N3C4C50.2°0.1°
N3C2C7O8108.1°180.0°
N3C2C1H21179.5°179.8°
C2N3C4H22179.8°180.0°
N3C2C7H26131.8°60.1°
N3C2C7H2512.0°60.0°
C7C2N3C4179.8°180.0°
C2C7O8H26120.1°120.0°
C2C7O8H25120.1°120.0°
C2C7O8C13148.8°180.0°
C7C2C1H210.5°0.3°
C2C7H26H25119.7°120.1°
N3C4C5H22180.0°179.9°
N3C4C5C60.4°0.1°
N3C4C5H23179.6°179.9°
C4C5C6H23180.0°180.0°
C4C5C6H24179.3°180.0°
C5C6C1H21179.8°179.8°
C6C5C4H22179.6°180.0°
C7O8C13C1221.3°0.8°
C7O8C13C14157.8°180.0°
O8C7H26H25119.7°120.0°
O8C13C14C9179.8°180.0°
O8C13C12C11179.7°179.8°
O8C13C12C14179.1°179.2°
O8C13C14C152.5°0.8°
C13O8C7H2628.7°60.0°
C13O8C7H2591.1°60.0°
O8C13C12H280.3°0.3°
C10C9C14H27180.0°179.9°
C9C10C11CL19179.4°179.7°
C9C10C11C121.5°0.2°
C9C10C11C20179.9°179.8°
C10C9C14C130.5°0.6°
C10C9C14C15178.3°179.7°
C14C9C10C111.0°0.1°
C14C9C10CL19179.5°179.6°
C9C14C13C120.7°0.9°
C9C14C13C15177.7°179.1°
C9C14C15C16127.5°0.8°
C9C14C15C176.0°120.8°
C9C14C15C18112.5°119.1°
C10C11C12C20178.6°180.0°
C10C11C12C131.6°0.0°
C10C11C20H3889.2°90.0°
C10C11C20H39150.8°150.0°
C10C11C20H4030.8°30.0°
C11C10C9H27179.0°180.0°
C10C11C12H28178.4°180.0°
CL19C10C11C12179.0°179.9°
CL19C10C11C200.5°0.0°
CL19C10C9H270.5°0.2°
C11C12C13H28180.0°179.9°
C11C12C13C141.3°0.6°
C12C11C20H3889.3°90.0°
C12C11C20H3930.7°30.0°
C12C11C20H40150.7°150.0°
C20C11C12C13179.9°180.0°
C11C20H38H39120.0°120.1°
C11C20H38H40120.0°120.0°
C11C20H39H40120.0°120.0°
C20C11C12H280.1°0.0°
C12C13C14C15178.4°180.0°
C13C14C15C1654.9°180.0°
C13C14C15C17176.4°60.1°
C13C14C15C1865.1°60.0°
C13C14C9H27179.5°179.5°
C14C13C12H28178.8°179.5°
C14C15C16C17122.8°120.0°
C14C15C16C18121.5°120.0°
C14C15C17C18120.6°120.0°
C14C15C16H30180.0°59.9°
C14C15C16H3160.0°60.0°
C14C15C16H2960.0°180.0°
C14C15C17H34180.0°180.0°
C14C15C17H3360.0°60.0°
C14C15C17H3260.0°59.9°
C14C15C18H37180.0°60.0°
C14C15C18H3560.0°60.0°
C14C15C18H3660.0°180.0°
C15C14C9H271.7°0.4°
C16C15C17C18116.5°120.0°
C15C16H30H31120.0°119.9°
C15C16H30H29120.0°120.0°
C15C16H31H29120.0°120.0°
C16C15C17H3457.1°60.0°
C16C15C17H3362.9°180.0°
C16C15C17H32177.1°60.0°
C16C15C18H3758.0°60.1°
C16C15C18H35178.0°180.0°
C16C15C18H3661.9°60.0°
C17C15C16H3057.3°60.0°
C17C15C16H31177.3°179.9°
C17C15C16H2962.8°60.0°
C15C17H34H33120.0°119.9°
C15C17H34H32120.0°120.0°
C15C17H33H32120.0°119.9°
C17C15C18H3759.1°180.0°
C17C15C18H3560.9°60.0°
C17C15C18H36179.0°60.0°
C18C15C16H3058.5°180.0°
C18C15C16H3161.5°60.1°
C18C15C16H29178.6°60.0°
C18C15C17H3459.4°60.0°
C18C15C17H33179.4°60.0°
C18C15C17H3260.6°180.0°
C15C18H37H35120.0°120.0°
C15C18H37H36120.0°120.0°
C15C18H35H36120.0°120.0°
H30C16H31H29120.0°120.0°
H34C17H33H32120.0°120.1°
H37C18H35H36120.0°120.0°
H38C20H39H40120.0°120.0°
H21C1C6H240.3°0.2°
H22C4C5H230.4°0.0°
H23C5C6H240.7°0.0°

251801

PDB entries from 2026-04-08

PDB statisticsPDBj update infoContact PDBjnumon