Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

Y7Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAUOATsing1.45Å1.41Å
OATCARsing1.34Å1.46Å
CAROASdoub1.21Å1.25Å
CARCAQsing1.51Å1.66Å
CAPCAQsing1.53Å1.55Å
CAPCAOsing1.53Å1.59Å
CAOCAMsing1.53Å1.56Å
CAMCACsing1.53Å1.62Å
CACSABsing1.84Å1.80Å
CACCADsing1.54Å1.59Å
SABCAAsing1.84Å1.82Å
CADNAFsing1.47Å1.48Å
CADCAEsing1.53Å1.63Å
CAACAEsing1.54Å1.46Å
NAFCAGsing1.34Å1.38Å
CAENAHsing1.47Å1.55Å
CAGNAHsing1.34Å1.31Å
CAGOANdoub1.22Å1.17Å
NAHCAVsing1.35Å1.31Å
CAVOAWdoub1.21Å1.23Å
CAVOAXsing1.35Å1.33Å
CAYOAXsing1.45Å1.49Å
CAUH1sing1.09Å1.10Å
CAUH2sing1.09Å1.10Å
CAUH3sing1.09Å1.10Å
CAQH4sing1.09Å1.10Å
CAQH5sing1.09Å1.10Å
CAPH6sing1.09Å1.10Å
CAPH7sing1.09Å1.10Å
CAOH8sing1.09Å1.10Å
CAOH9sing1.09Å1.10Å
CAMH10sing1.09Å1.10Å
CAMH11sing1.09Å1.10Å
CACH12sing1.09Å1.10Å
CAAH13sing1.09Å1.10Å
CAAH14sing1.09Å1.10Å
CAEH15sing1.09Å1.10Å
CADH16sing1.09Å1.10Å
NAFH17sing0.97Å1.00Å
CAYH18sing1.09Å1.10Å
CAYH19sing1.09Å1.10Å
CAYH20sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAUOATCAR115.0°117.0°
OATCAUH1109.5°109.4°
OATCAUH2109.5°109.5°
OATCAUH3109.5°109.4°
OATCAROAS119.3°120.0°
OATCARCAQ118.2°120.0°
OASCARCAQ122.4°120.0°
CARCAQCAP110.9°109.4°
CARCAQH4109.1°109.5°
CARCAQH5109.1°109.5°
CAQCAPCAO121.5°109.5°
CAPCAQH4109.1°109.5°
CAPCAQH5109.1°109.5°
CAQCAPH6106.4°109.5°
CAQCAPH7106.4°109.5°
CAPCAOCAM119.5°109.5°
CAOCAPH6106.4°109.4°
CAOCAPH7106.4°109.5°
CAPCAOH8106.9°109.4°
CAPCAOH9106.9°109.5°
CAOCAMCAC110.2°109.4°
CAMCAOH8106.9°109.5°
CAMCAOH9106.9°109.5°
CAOCAMH10109.3°109.5°
CAOCAMH11109.3°109.5°
CAMCACSAB125.6°110.8°
CAMCACCAD115.3°110.7°
CACCAMH10109.3°109.5°
CACCAMH11109.3°109.5°
CAMCACH12107.0°110.7°
SABCACCAD94.6°102.7°
CACSABCAA104.7°94.8°
SABCACH12105.3°110.8°
CACCADNAF114.0°109.2°
CACCADCAE115.6°112.4°
CADCACH12107.3°110.9°
CACCADH16107.9°110.3°
SABCAACAE103.6°102.7°
SABCAAH13110.9°110.8°
SABCAAH14110.9°110.8°
NAFCADCAE102.4°104.0°
CADNAFCAG107.7°109.0°
NAFCADH16109.3°110.3°
CADNAFH17126.2°125.5°
CADCAECAA111.0°112.4°
CADCAENAH104.2°104.0°
CADCAEH15110.4°110.6°
CAECADH16107.4°110.5°
CAACAENAH106.1°109.2°
CAECAAH13110.9°110.8°
CAECAAH14110.9°110.7°
CAACAEH15113.0°110.3°
NAFCAGNAH120.4°113.9°
NAFCAGOAN128.3°123.0°
CAGNAFH17126.1°125.5°
CAENAHCAG104.9°109.0°
CAENAHCAV140.1°125.5°
NAHCAEH15111.6°110.3°
NAHCAGOAN111.2°123.0°
CAGNAHCAV112.4°125.5°
NAHCAVOAW124.1°120.0°
NAHCAVOAX109.4°120.0°
OAWCAVOAX116.3°120.0°
CAVOAXCAY108.9°117.0°
OAXCAYH18109.5°109.5°
OAXCAYH19109.5°109.5°
OAXCAYH20109.5°109.5°
H1CAUH2109.5°109.5°
H1CAUH3109.4°109.5°
H2CAUH3109.5°109.5°
H4CAQH5109.5°109.5°
H6CAPH7109.5°109.5°
H8CAOH9109.5°109.5°
H10CAMH11109.4°109.5°
H13CAAH14109.5°110.8°
H18CAYH19109.5°109.5°
H18CAYH20109.4°109.5°
H19CAYH20109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAUOATCAROAS23.3°0.1°
CAUOATCARCAQ156.3°180.0°
OATCAUH1H2120.0°120.0°
OATCAUH1H3120.0°119.9°
OATCAUH2H3120.0°120.0°
OATCAROASCAQ179.6°179.9°
OATCARCAQCAP55.5°180.0°
CAROATCAUH1180.0°60.0°
CAROATCAUH260.0°180.0°
CAROATCAUH360.0°59.9°
OATCARCAQH464.7°60.0°
OATCARCAQH5175.7°59.9°
OASCARCAQCAP124.1°0.1°
OASCARCAQH4115.7°120.1°
OASCARCAQH53.9°120.0°
CARCAQCAPH4120.2°120.0°
CARCAQCAPH5120.3°120.0°
CARCAQCAPCAO131.3°180.0°
CARCAQH4H5119.4°120.0°
CARCAQCAPH69.7°60.1°
CARCAQCAPH7107.0°60.0°
CAQCAPCAOH6121.7°120.0°
CAQCAPCAOH7121.7°120.0°
CAQCAPCAOCAM65.1°180.0°
CAPCAQH4H5119.3°120.0°
CAQCAPH6H7114.6°120.1°
CAQCAPCAOH856.3°60.0°
CAQCAPCAOH9173.5°60.0°
CAPCAOCAMH8121.4°119.9°
CAPCAOCAMH9121.4°120.0°
CAPCAOCAMCAC152.6°180.0°
CAOCAPCAQH4108.5°60.0°
CAOCAPCAQH511.1°60.0°
CAOCAPH6H7114.5°120.0°
CAPCAOH8H9115.5°120.0°
CAPCAOCAMH1032.5°60.1°
CAPCAOCAMH1187.2°60.0°
CAOCAMCACH10120.1°120.0°
CAOCAMCACH11120.1°120.0°
CAOCAMCACSAB17.9°66.5°
CAOCAMCACCAD134.6°179.8°
CAMCAOCAPH6173.2°60.0°
CAMCAOCAPH756.6°60.0°
CAMCAOH8H9115.5°120.1°
CAOCAMH10H11119.7°120.1°
CAOCAMCACH12106.1°56.8°
CAMCACSABCAD125.9°118.3°
CAMCACSABH12124.7°123.2°
CAMCACCADH12119.2°123.3°
CAMCACSABCAA156.1°153.0°
CAMCACCADNAF42.8°28.1°
CAMCACCADCAE161.0°143.0°
CACCAMCAOH886.0°60.0°
CACCAMCAOH931.2°60.0°
CACCAMH10H11119.7°120.0°
CAMCACCADH1678.8°93.3°
SABCACCADH12107.6°118.4°
SABCACCADNAF90.4°90.2°
SABCACCADCAE27.8°24.6°
CACSABCAACAE25.4°34.7°
SABCACCAMH10138.0°173.6°
SABCACCAMH11102.2°53.5°
CACSABCAAH13144.5°153.0°
CACSABCAAH1493.6°83.6°
SABCACCADH16148.0°148.4°
CADCACSABCAA30.2°34.7°
CACCADNAFCAE125.5°120.1°
CACCADNAFH16120.8°121.4°
CACCADCAEH16120.4°123.7°
CACCADCAECAA14.0°0.0°
CACCADNAFCAG130.7°120.2°
CACCADCAENAH127.8°118.0°
CADCACCAMH10105.3°60.3°
CADCACCAMH1114.5°59.8°
CACCADCAEH15112.2°123.6°
CACCADNAFH1749.4°59.9°
SABCAACAECAD8.7°24.6°
SABCAACAEH13119.1°118.4°
SABCAACAEH14119.1°118.3°
SABCAACAENAH103.9°90.3°
CAASABCACH1279.2°83.8°
SABCAAH13H14122.7°123.4°
SABCAACAEH15133.5°148.4°
NAFCADCAEH16115.1°118.3°
NAFCADCAECAA110.5°117.9°
CADNAFCAGH17180.0°179.9°
NAFCADCAENAH3.3°0.0°
CADNAFCAGNAH6.0°0.0°
CADNAFCAGOAN171.4°180.0°
NAFCADCACH12162.0°151.4°
NAFCADCAEH15123.3°118.4°
CADCAECAANAH112.6°114.9°
CADCAECAAH15124.7°123.8°
CAECADNAFCAG5.1°0.0°
CADCAENAHH15119.2°118.5°
CADCAENAHCAG0.3°0.0°
CADCAENAHCAV159.0°180.0°
CAECADCACH1279.8°93.8°
CADCAECAAH13127.8°142.9°
CADCAECAAH14110.3°93.7°
CAECADNAFH17174.9°180.0°
CAACAENAHH15123.5°121.3°
CAACAENAHCAG117.0°120.2°
CAACAENAHCAV83.7°59.8°
CAECAAH13H14122.7°123.3°
CAACAECADH16134.4°123.7°
NAFCAGNAHCAE3.5°0.0°
NAFCAGNAHOAN177.8°180.0°
NAFCAGNAHCAV169.3°180.0°
CAGNAFCADH16108.5°118.4°
CAENAHCAGCAV165.8°180.0°
CAENAHCAGOAN174.3°180.0°
CAENAHCAVOAW66.0°0.0°
CAENAHCAVOAX77.8°180.0°
NAHCAECAAH1315.1°28.0°
NAHCAECAAH14137.0°151.4°
NAHCAECADH16111.7°118.3°
CAGNAHCAVOAW135.7°180.0°
CAGNAHCAVOAX80.5°0.0°
CAGNAHCAEH15119.5°118.5°
NAHCAGNAFH17174.0°180.0°
OANCAGNAHCAV8.5°0.0°
OANCAGNAFH178.6°0.0°
NAHCAVOAWOAX141.5°180.0°
NAHCAVOAXCAY67.8°180.0°
CAVNAHCAEH1539.8°61.5°
OAWCAVOAXCAY79.1°0.0°
CAVOAXCAYH18180.0°60.0°
CAVOAXCAYH1960.0°60.0°
CAVOAXCAYH2060.0°180.0°
OAXCAYH18H19120.0°120.0°
OAXCAYH18H20120.0°120.0°
OAXCAYH19H20120.0°120.0°
H1CAUH2H3120.0°120.0°
H4CAQCAPH6129.9°179.9°
H4CAQCAPH713.2°60.0°
H5CAQCAPH6110.6°59.9°
H5CAQCAPH7132.7°180.0°
H6CAPCAOH865.3°NaN°
H6CAPCAOH951.8°60.0°
H7CAPCAOH8178.0°60.0°
H7CAPCAOH964.8°180.0°
H8CAOCAMH10153.9°180.0°
H8CAOCAMH1134.2°59.9°
H9CAOCAMH1088.9°59.9°
H9CAOCAMH11151.3°180.0°
H10CAMCACH1214.0°63.1°
H11CAMCACH12133.8°176.8°
H12CACCADH1640.4°30.0°
H13CAACAEH15107.5°93.2°
H14CAACAEH1514.4°30.1°
H15CAECADH168.3°0.0°
H16CADNAFH1771.5°61.5°
H18CAYH19H20120.0°120.0°

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon