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Y5H

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.54Å1.57Å
C1N3sing1.48Å1.49Å
C1C4sing1.51Å1.51Å
S1C20sing1.76Å1.73ÅAromatic
S1C25sing1.76Å1.74ÅAromatic
CL1C25sing1.74Å1.75Å
C2C5sing1.55Å1.55Å
C2C6sing1.51Å1.52Å
N3C7sing1.49Å1.47Å
N3C8sing1.48Å1.48Å
C4C9doub1.35Å1.34ÅAromatic
C4N16sing1.34Å1.38ÅAromatic
C5C7sing1.54Å1.53Å
C5C11sing1.51Å1.51Å
C6N12sing1.34Å1.40Å
C6O13doub1.21Å1.22Å
C7C14sing1.54Å1.54Å
C8C15sing1.54Å1.54Å
C9O10sing1.35Å1.39ÅAromatic
O10C17sing1.35Å1.36ÅAromatic
C11N12sing1.34Å1.41Å
C11O18doub1.21Å1.23Å
N12C19sing1.46Å1.47Å
C14C15sing1.54Å1.54Å
N16C17doub1.32Å1.32ÅAromatic
C17C20sing1.47Å1.46ÅAromatic
C19C21sing1.53Å1.54Å
C20C22doub1.36Å1.39ÅAromatic
C21C23sing1.53Å1.54Å
C22C24sing1.38Å1.41ÅAromatic
C23N29sing1.47Å1.52Å
C24C25doub1.34Å1.37ÅAromatic
N29C30sing1.47Å1.49Å
N29C31sing1.47Å1.51Å
N29C32sing1.47Å1.50Å
C24H24sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C1H1sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C8H82sing1.09Å1.10Å
C8H81sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
C21H211sing1.09Å1.10Å
C21H212sing1.09Å1.10Å
C23H231sing1.09Å1.10Å
C23H232sing1.09Å1.10Å
C32H321sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C32H323sing1.09Å1.10Å
C31H311sing1.09Å1.10Å
C31H312sing1.09Å1.10Å
C31H313sing1.09Å1.10Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
C30H303sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1N3102.3°105.3°
C2C1C4110.8°110.4°
C1C2C5105.0°105.0°
C1C2C6116.4°109.4°
C2C1H1114.7°110.3°
C1C2H2106.0°112.5°
N3C1C4113.4°110.3°
C1N3C7103.2°104.5°
C1N3C8113.3°109.5°
N3C1H1112.1°110.3°
C1C4C9127.2°126.1°
C1C4N16123.7°126.1°
C4C1H1103.8°110.3°
C20S1C2589.9°91.1°
S1C20C17120.3°125.3°
S1C20C22111.8°109.4°
S1C25CL1118.5°125.1°
S1C25C24113.9°109.9°
CL1C25C24127.6°125.0°
C5C2C6102.7°103.4°
C2C5C7103.6°105.2°
C2C5C11106.1°103.3°
C2C5H5115.8°113.2°
C5C2H2119.1°112.7°
C2C6N12111.4°109.3°
C2C6O13128.2°125.4°
C6C2H2108.2°113.0°
C7N3C8105.5°104.5°
N3C7C5106.6°105.1°
N3C7C14105.1°104.9°
N3C7H7115.8°112.2°
N3C8C15105.0°105.1°
N3C8H82111.0°110.3°
N3C8H81111.9°110.3°
C9C4N16109.1°107.9°
C4C9O10109.4°107.3°
C4C9H9125.3°126.3°
C4N16C17104.4°108.6°
C7C5C11111.0°109.3°
C5C7C14114.3°109.1°
C5C7H7106.9°112.9°
C7C5H5111.3°112.6°
C5C11N12109.7°109.4°
C5C11O18129.4°125.3°
C11C5H5109.0°112.6°
N12C6O13120.4°125.3°
C6N12C11109.9°114.5°
C6N12C19123.8°122.8°
C7C14C15103.3°105.4°
C14C7H7108.3°112.1°
C7C14H141111.6°110.3°
C7C14H142112.9°110.3°
C8C15C14106.8°105.1°
C15C8H82111.0°110.4°
C15C8H81111.9°110.3°
C8C15H151110.3°110.3°
C8C15H152111.0°110.4°
C9O10C17102.7°107.7°
O10C9H9125.3°126.3°
O10C17N16114.2°108.5°
O10C17C20117.1°125.8°
N12C11O18120.9°125.3°
C11N12C19126.1°122.7°
N12C19C21110.5°109.5°
N12C19H191109.2°109.5°
N12C19H192108.9°109.5°
C15C14H141111.6°110.3°
C15C14H142112.9°110.2°
C14C15H151110.4°110.3°
C14C15H152110.9°110.3°
N16C17C20127.8°125.8°
C17C20C22127.4°125.3°
C19C21C23104.6°109.5°
C21C19H191109.1°109.5°
C21C19H192108.9°109.5°
C19C21H211111.2°109.5°
C19C21H212112.2°109.4°
C20C22C24113.4°114.5°
C20C22H22123.3°122.8°
C21C23N29113.8°109.5°
C23C21H211111.2°109.4°
C23C21H212112.2°109.5°
C21C23H231108.0°109.4°
C21C23H232107.0°109.5°
C22C24C25110.9°115.1°
C22C24H24124.6°122.4°
C24C22H22123.3°122.8°
C23N29C30113.2°109.5°
C23N29C31106.0°109.5°
C23N29C32109.9°109.5°
N29C23H231108.1°109.5°
N29C23H232107.1°109.5°
C25C24H24124.6°122.4°
C30N29C31111.0°109.5°
C30N29C32109.5°109.4°
N29C30H301109.5°109.5°
N29C30H302109.4°109.5°
N29C30H303109.4°109.4°
C31N29C32107.0°109.4°
N29C31H311109.5°109.4°
N29C31H312109.4°109.5°
N29C31H313109.4°109.5°
N29C32H321109.5°109.5°
N29C32H322109.4°109.5°
N29C32H323109.5°109.5°
H82C8H81106.1°110.3°
H141C14H142104.8°110.3°
H151C15H152107.5°110.3°
H191C19H192110.2°109.4°
H211C21H212105.7°109.5°
H231C23H232112.9°109.4°
H321C32H322109.5°109.5°
H321C32H323109.5°109.4°
H322C32H323109.5°109.5°
H311C31H312109.5°109.4°
H311C31H313109.4°109.5°
H312C31H313109.6°109.4°
H301C30H302109.5°109.5°
H301C30H303109.4°109.4°
H302C30H303109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1N3C4119.4°119.0°
C2C1N3H1123.4°119.0°
C2C1C4H1123.6°122.1°
C1C2C5C6122.2°114.7°
C1C2C5H2118.4°122.9°
C1C2C6H2119.2°126.3°
C2C1N3C743.1°37.9°
C2C1N3C8156.7°149.4°
C2C1C4C9120.5°117.3°
C2C1C4N1657.5°62.6°
C1C2C5C74.8°0.7°
C1C2C5C11121.7°115.3°
C1C2C6N12110.9°112.0°
C1C2C6O1368.1°68.0°
C1C2C5H5117.3°122.6°
N3C1C4H1122.0°122.0°
N3C1C2C529.2°23.4°
N3C1C2C683.5°87.0°
C1N3C7C8119.2°115.0°
N3C1C4C96.2°126.9°
N3C1C4N16171.9°53.2°
C1N3C7C541.6°37.4°
C1N3C7C1480.1°77.6°
C1N3C8C1580.5°73.6°
C1N3C7H7160.4°160.5°
C1N3C8H82159.5°167.5°
C1N3C8H8141.2°45.3°
N3C1C2H2156.1°146.4°
C4C1C2C5150.4°142.4°
C4C1C2C637.7°31.9°
C4C1N3C7162.5°156.9°
C4C1N3C883.9°91.6°
C1C4C9N16178.3°179.9°
C1C4C9O10178.6°179.9°
C1C4N16C17178.5°179.8°
C1C4C9H91.3°0.2°
C4C1C2H282.7°94.6°
C20S1C25CL1178.9°180.0°
S1C20C17O10171.5°174.9°
S1C20C17N163.4°4.8°
S1C20C17C22171.8°179.7°
S1C20C22C241.1°0.2°
C20S1C25C242.7°0.3°
S1C20C22H22178.9°179.8°
S1C25CL1C24178.1°179.7°
C25S1C20C17172.2°180.0°
C25S1C20C220.8°0.3°
S1C25C24C223.8°0.2°
S1C25C24H24176.2°179.8°
CL1C25C24C22178.0°179.9°
CL1C25C24H242.0°0.0°
C5C2C6H2126.7°122.2°
C2C5C7N321.9°22.1°
C2C5C7C11113.4°110.4°
C2C5C7H5125.0°123.7°
C2C5C11H5125.3°122.5°
C5C2C6N123.2°0.5°
C5C2C6O13177.8°179.5°
C2C5C7C1493.7°90.0°
C2C5C11N122.5°0.5°
C2C5C11O18178.2°179.5°
C5C2C1H192.4°95.5°
C2C5C7H7146.4°144.7°
C6C2C5C7117.4°114.0°
C6C2C5C110.4°0.6°
C2C6N12O13179.1°180.0°
C2C6N12C115.0°0.2°
C2C6N12C19179.7°179.8°
C6C2C1H1154.8°154.1°
C6C2C5H5120.6°122.7°
N3C7C5C14115.7°112.1°
N3C7C5H7124.5°122.6°
N3C7C5C1191.5°88.3°
N3C7C14H7124.4°122.0°
C7N3C8C1531.7°38.0°
N3C7C14C1530.1°22.1°
C7N3C1H180.3°81.1°
C7N3C8H8288.3°81.0°
C7N3C8H81153.4°156.9°
N3C7C5H5146.9°145.8°
N3C7C14H14190.0°96.9°
N3C7C14H142152.3°141.1°
C8N3C7C5160.7°152.4°
C8N3C7C1439.0°37.4°
N3C8C15H82120.0°118.9°
N3C8C15H81121.7°118.9°
N3C8C15C1412.4°23.6°
C8N3C1H133.3°30.4°
C8N3C7H780.5°84.5°
N3C8H82H81121.8°122.1°
N3C8C15H151132.4°95.4°
N3C8C15H152108.6°142.5°
C4C9O10H9180.0°179.9°
C4C9O10C172.4°0.1°
C9C4N16C173.1°0.2°
C9C4C1H1115.8°4.8°
N16C4C9O100.4°0.0°
C4N16C17O105.0°0.3°
C4N16C17C20173.4°180.0°
N16C4C9H9179.6°179.8°
N16C4C1H166.1°175.2°
C7C5C11H5122.9°125.9°
C5C7C14H7119.1°125.8°
C7C5C11N12109.4°111.1°
C7C5C11O1869.9°68.9°
C5C7C14C15146.6°134.3°
C7C5C2H2123.2°123.6°
C5C7C14H14126.5°15.3°
C5C7C14H14291.2°106.8°
C5C11N12C64.6°0.2°
C11C5C7C14152.8°159.7°
C5C11N12O18179.4°179.9°
C5C11N12C19179.8°179.8°
C11C5C7H732.9°34.3°
C11C5C2H2119.9°121.9°
C6N12C11C19175.2°179.9°
C6N12C11O18176.0°179.8°
C6N12C19C2195.6°85.3°
N12C6C2H2130.0°121.7°
C6N12C19H19124.4°34.7°
C6N12C19H192144.8°154.7°
O13C6N12C11175.9°179.8°
O13C6N12C190.6°0.2°
O13C6C2H251.0°58.3°
C7C14C15C810.5°0.8°
C7C14C15H141120.0°119.0°
C7C14C15H142122.3°119.0°
C14C7C5H531.3°33.8°
C7C14H141H142122.5°122.0°
C7C14C15H151109.5°118.1°
C7C14C15H152131.5°119.8°
C8C15C14H151120.0°118.9°
C8C15C14H152121.0°119.0°
C15C8H82H81121.8°122.2°
C8C15C14H141109.5°119.8°
C8C15C14H142132.8°118.2°
C8C15H151H152121.1°122.2°
C9O10C17N164.7°0.2°
C9O10C17C20174.4°180.0°
O10C17N16C20168.4°179.7°
O10C17C20C220.3°5.3°
C17O10C9H9177.6°180.0°
C11N12C19C2178.9°94.6°
N12C11C5H5127.7°123.1°
C11N12C19H191161.0°145.4°
C11N12C19H19240.6°25.4°
O18C11N12C190.8°0.1°
O18C11C5H553.0°57.0°
N12C19C21H191120.0°120.1°
N12C19C21H192119.6°120.0°
N12C19C21C23173.7°175.1°
N12C19H191H192119.6°120.0°
N12C19C21H21166.3°64.9°
N12C19C21H21251.8°55.1°
C15C14C7H794.3°99.9°
C14C15C8H82107.6°95.4°
C14C15C8H81134.0°142.4°
C15C14H141H142122.5°122.0°
C14C15H151H152121.1°122.1°
N16C17C20C22168.4°175.0°
C17C20C22C24173.6°180.0°
C17C20C22H226.5°0.0°
C19C21C23H211120.0°120.0°
C19C21C23H212121.8°120.0°
C19C21C23N29177.0°175.1°
C21C19H191H192119.6°119.9°
C19C21H211H212122.0°120.0°
C19C21C23H23163.0°55.1°
C19C21C23H23258.9°64.8°
C20C22C24H22180.0°180.0°
C20C22C24C253.2°0.0°
C20C22C24H24176.9°180.0°
C21C23N29H231120.0°120.0°
C21C23N29H232118.1°120.0°
C21C23N29C3061.7°65.3°
C21C23N29C31176.4°54.8°
C21C23N29C3261.1°174.8°
C23C21C19H19153.6°55.0°
C23C21C19H19266.8°64.9°
C23C21H211H212122.0°120.0°
C21C23H231H232118.2°119.9°
C22C24C25H24180.0°180.0°
C23N29C30C31119.1°120.1°
C23N29C30C32123.0°120.0°
C23N29C31C32117.3°120.0°
N29C23C21H21157.0°64.8°
N29C23C21H21261.2°55.1°
N29C23H231H232118.2°120.1°
C23N29C32H3210.3°60.0°
C23N29C32H322119.7°180.0°
C23N29C32H323120.3°60.0°
C23N29C31H31146.1°66.4°
C23N29C31H31273.9°173.7°
C23N29C31H313166.1°53.6°
C23N29C30H301136.2°59.9°
C23N29C30H30216.1°180.0°
C23N29C30H303103.9°60.0°
C25C24C22H22176.9°180.0°
C30N29C31C32119.4°119.9°
C30N29C23H23158.3°54.7°
C30N29C23H232179.8°174.7°
C30N29C32H321125.2°180.0°
C30N29C32H3225.2°60.0°
C30N29C32H323114.8°60.0°
C30N29C31H31177.2°53.7°
C30N29C31H312162.8°66.3°
C30N29C31H31342.8°173.7°
N29C30H301H302120.0°120.1°
N29C30H301H303120.0°119.9°
N29C30H302H303120.0°120.0°
C31N29C23H23163.6°174.8°
C31N29C23H23258.3°65.2°
C31N29C32H321114.4°60.0°
C31N29C32H322125.6°60.0°
C31N29C32H3235.6°180.0°
N29C31H311H312120.0°120.0°
N29C31H311H313120.0°120.0°
N29C31H312H313120.0°120.1°
C31N29C30H301104.8°180.0°
C31N29C30H302135.2°59.9°
C31N29C30H30315.2°60.1°
C32N29C23H231178.9°65.3°
C32N29C23H23257.0°54.7°
N29C32H321H322120.0°120.0°
N29C32H321H323120.0°120.0°
N29C32H322H323120.0°120.0°
C32N29C31H311163.4°173.6°
C32N29C31H31243.4°53.7°
C32N29C31H31376.7°66.3°
C32N29C30H30113.1°60.1°
C32N29C30H302106.9°60.0°
C32N29C30H303133.1°180.0°
H24C24C22H223.1°0.0°
H1C1C2H234.5°27.5°
H7C7C5H588.6°91.6°
H7C7C14H141145.6°141.1°
H7C7C14H14227.9°19.1°
H82C8C15H15112.4°145.7°
H82C8C15H152131.4°23.6°
H81C8C15H151106.0°23.5°
H81C8C15H15213.0°98.7°
H5C5C2H21.1°0.3°
H141C14C15H151130.5°0.9°
H141C14C15H15211.5°121.2°
H142C14C15H15112.8°122.9°
H142C14C15H152106.2°0.8°
H191C19C21H211173.7°175.0°
H191C19C21H21268.2°65.0°
H192C19C21H21153.3°55.1°
H192C19C21H212171.4°175.1°
H211C21C23H231177.0°175.2°
H211C21C23H23261.1°55.2°
H212C21C23H23158.9°64.9°
H212C21C23H232179.2°175.2°
H321C32H322H323120.0°120.0°
H311C31H312H313120.0°120.0°
H301C30H302H303120.0°120.0°

222624

PDB entries from 2024-07-17

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