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Y5B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C03C04doub1.38Å1.38ÅAromatic
C03C02sing1.38Å1.38ÅAromatic
C04C05sing1.38Å1.37ÅAromatic
C02C01doub1.38Å1.38ÅAromatic
C05C06doub1.38Å1.38ÅAromatic
C01C06sing1.38Å1.38ÅAromatic
C01S12sing1.76Å1.76Å
O14S12doub1.42Å1.43Å
F37C34sing1.40Å1.33Å
C9C10doub1.38Å1.38ÅAromatic
C9C19sing1.38Å1.38ÅAromatic
C24C25doub1.38Å1.38ÅAromatic
C24C23sing1.39Å1.38ÅAromatic
F36C34sing1.40Å1.33Å
C16N15sing1.47Å1.46Å
C16C19sing1.51Å1.50Å
C10C11sing1.39Å1.39ÅAromatic
C25C26sing1.38Å1.39ÅAromatic
S12N15sing1.66Å1.68Å
S12O13doub1.42Å1.42Å
N15C23sing1.40Å1.38Å
C19C2doub1.38Å1.39ÅAromatic
C34F35sing1.40Å1.33Å
C34C33sing1.53Å1.54Å
C23C28doub1.39Å1.38ÅAromatic
C17C1doub1.38Å1.39ÅAromatic
C17C12sing1.39Å1.39ÅAromatic
C11C12sing1.48Å1.49Å
C11C18doub1.39Å1.39ÅAromatic
C26C33sing1.51Å1.53Å
C26C27doub1.38Å1.39ÅAromatic
F40C38sing1.40Å1.33Å
C1C15sing1.38Å1.37ÅAromatic
C33C38sing1.53Å1.54Å
C33O42sing1.43Å1.42Å
C2C18sing1.38Å1.39ÅAromatic
C12C13doub1.39Å1.39ÅAromatic
C28C27sing1.38Å1.38ÅAromatic
C38F41sing1.40Å1.33Å
C38F39sing1.40Å1.33Å
C15C14doub1.38Å1.38ÅAromatic
C13C14sing1.38Å1.39ÅAromatic
C9H1sing1.08Å1.08Å
C13H2sing1.08Å1.08Å
C18H3sing1.08Å1.08Å
C1H4sing1.08Å1.08Å
C2H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C14H7sing1.08Å1.08Å
C15H8sing1.08Å1.08Å
C24H9sing1.08Å1.08Å
C27H10sing1.08Å1.08Å
O42H11sing0.97Å0.95Å
C02H12sing1.08Å1.08Å
C03H13sing1.08Å1.08Å
C04H14sing1.08Å1.08Å
C05H15sing1.08Å1.08Å
C06H16sing1.08Å1.08Å
C16H17sing1.09Å1.10Å
C16H18sing1.09Å1.10Å
C17H19sing1.08Å1.08Å
C25H20sing1.08Å1.08Å
C28H21sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C04C03C02120.3°120.0°
C03C04C05120.3°120.0°
C04C03H13119.8°120.0°
C03C04H14119.9°120.0°
C03C02C01118.9°120.0°
C03C02H12120.5°120.0°
C02C03H13119.9°120.0°
C04C05C06120.3°120.0°
C05C04H14119.8°120.0°
C04C05H15119.9°120.0°
C02C01C06121.0°120.1°
C02C01S12119.5°120.0°
C01C02H12120.5°120.0°
C05C06C01119.1°120.0°
C06C05H15119.8°120.0°
C05C06H16120.4°120.0°
C06C01S12119.5°119.9°
C01C06H16120.4°120.1°
C01S12O14108.1°106.4°
C01S12N15103.4°107.2°
C01S12O13107.9°106.4°
O14S12N15108.0°106.4°
O14S12O13119.9°123.2°
F37C34F36107.3°109.5°
F37C34F35107.0°109.5°
F37C34C33111.5°109.5°
C10C9C19121.2°120.1°
C9C10C11121.1°119.9°
C10C9H1119.4°119.9°
C9C10H6119.4°120.1°
C9C19C16119.1°119.9°
C9C19C2118.2°120.2°
C19C9H1119.4°120.0°
C25C24C23120.4°119.9°
C24C25C26121.1°120.1°
C25C24H9119.8°120.0°
C24C25H20119.5°119.9°
C24C23N15120.0°120.1°
C24C23C28119.1°119.9°
C23C24H9119.8°120.1°
F36C34F35106.8°109.5°
F36C34C33112.0°109.5°
N15C16C19123.6°109.5°
C16N15S12117.4°120.0°
C16N15C23124.6°120.0°
N15C16H17105.8°109.4°
N15C16H18105.8°109.5°
C16C19C2122.6°119.9°
C19C16H17105.8°109.5°
C19C16H18105.8°109.5°
C10C11C12120.2°120.1°
C10C11C18117.5°119.7°
C11C10H6119.4°120.0°
C25C26C33120.5°119.9°
C25C26C27118.0°120.1°
C26C25H20119.5°120.0°
N15S12O13108.3°106.4°
S12N15C23117.2°120.0°
N15C23C28120.6°120.1°
C19C2C18120.7°120.1°
C19C2H5119.7°119.9°
F35C34C33112.0°109.4°
C34C33C26109.6°109.5°
C34C33C38110.1°109.5°
C34C33O42103.7°109.4°
C23C28C27120.5°119.9°
C23C28H21119.8°120.0°
C1C17C12121.2°119.9°
C17C1C15120.2°120.1°
C17C1H4119.9°120.0°
C1C17H19119.4°120.0°
C17C12C11120.7°120.1°
C17C12C13117.7°119.7°
C12C17H19119.4°120.1°
C12C11C18122.3°120.2°
C11C12C13121.6°120.1°
C11C18C2121.3°119.9°
C11C18H3119.4°120.1°
C33C26C27121.5°119.9°
C26C33C38112.4°109.5°
C26C33O42110.6°109.5°
C26C27C28120.9°120.1°
C26C27H10119.6°120.0°
F40C38C33111.6°109.5°
F40C38F41106.8°109.5°
F40C38F39107.1°109.5°
C1C15C14119.7°120.2°
C15C1H4119.9°119.9°
C1C15H8120.1°119.8°
C38C33O42110.0°109.5°
C33C38F41111.7°109.4°
C33C38F39112.4°109.5°
C33O42H11109.5°114.0°
C2C18H3119.4°120.0°
C18C2H5119.7°120.0°
C12C13C14121.0°119.9°
C12C13H2119.5°120.1°
C28C27H10119.5°120.0°
C27C28H21119.7°120.0°
F41C38F39106.9°109.5°
C15C14C13120.2°120.1°
C15C14H7119.9°119.9°
C14C15H8120.2°119.9°
C14C13H2119.5°120.0°
C13C14H7119.9°120.0°
H17C16H18109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C04C03C02H13180.0°180.0°
C03C04C05H14180.0°180.0°
C04C03C02C010.1°0.0°
C03C04C05C060.4°0.1°
C04C03C02H12179.9°180.0°
C03C04C05H15179.6°180.0°
C02C03C04C050.3°0.1°
C03C02C01H12180.0°180.0°
C03C02C01C060.3°0.0°
C03C02C01S12178.8°179.7°
C02C03C04H14179.7°180.0°
C04C05C06H15180.0°179.9°
C04C05C06C010.1°0.1°
C05C04C03H13179.7°180.0°
C04C05C06H16179.9°179.8°
C02C01C06C050.2°0.0°
C02C01C06S12179.1°179.7°
C02C01S12O1425.8°152.1°
C02C01S12N1588.6°94.4°
C02C01S12O13156.8°19.2°
C01C02C03H13179.9°180.0°
C02C01C06H16179.8°179.7°
C05C06C01H16180.0°179.7°
C05C06C01S12178.9°179.7°
C06C05C04H14179.6°179.9°
C06C01S12O14155.1°28.2°
C06C01S12N1590.5°85.4°
C06C01S12O1324.1°161.1°
C06C01C02H12179.6°180.0°
C01C06C05H15179.9°180.0°
C01S12O14N15111.3°114.1°
C01S12O14O13124.1°122.9°
C01S12N15C16122.1°95.4°
C01S12N15O13114.3°113.5°
C01S12N15C2347.9°84.6°
S12C01C02H121.2°0.3°
S12C01C06H161.1°0.0°
O14S12N15C167.6°151.0°
O14S12N15O13131.3°132.9°
O14S12N15C23162.4°29.0°
F37C34F36F35114.5°120.0°
F37C34F36C33122.6°120.0°
F37C34F35C33122.4°120.0°
F37C34C33C2662.9°180.0°
F37C34C33C3861.3°60.0°
F37C34C33O42179.0°60.1°
C10C9C19H1180.0°179.8°
C10C9C19C16178.4°180.0°
C9C10C11H6180.0°179.9°
C10C9C19C22.6°0.0°
C9C10C11C12179.8°180.0°
C9C10C11C180.3°0.1°
C9C19C16N15143.7°91.5°
C9C19C16C2175.6°179.9°
C19C9C10C111.4°0.0°
C9C19C2C182.7°0.1°
C9C19C2H5177.3°179.9°
C19C9C10H6178.5°179.9°
C9C19C16H1794.3°148.5°
C9C19C16H1821.8°28.5°
C25C24C23H9180.0°179.8°
C24C25C26H20180.0°180.0°
C25C24C23N15176.1°180.0°
C25C24C23C283.2°0.1°
C24C25C26C33178.6°180.0°
C24C25C26C270.9°0.0°
C24C23N15C1657.0°117.1°
C23C24C25C261.4°0.0°
C24C23N15S12112.2°62.9°
C24C23N15C28172.8°179.9°
C24C23C28C272.8°0.1°
C23C24C25H20178.6°180.0°
C24C23C28H21177.2°180.0°
F36C34F35C33123.0°120.0°
F36C34C33C2657.3°60.0°
F36C34C33C38178.6°180.0°
F36C34C33O4260.9°60.0°
N15C16C19H17121.9°120.0°
N15C16C19H18121.9°120.0°
C16N15S12C23170.0°180.0°
C16N15S12O13123.6°18.1°
N15C16C19C240.6°88.6°
C16N15C23C28130.2°62.9°
N15C16H17H18113.7°120.0°
C19C16N15S12153.0°97.2°
C19C16N15C2337.8°82.8°
C16C19C2C18178.4°180.0°
C16C19C9H11.6°0.3°
C16C19C2H51.7°0.1°
C19C16H17H18113.6°120.0°
C10C11C12C1730.0°0.0°
C10C11C12C18179.4°179.9°
C10C11C18C20.4°0.0°
C10C11C12C13148.5°180.0°
C11C10C9H1178.6°179.7°
C10C11C18H3179.6°179.9°
C25C26C33C3434.6°120.4°
C25C26C33C27177.6°180.0°
C25C26C33C3888.2°119.6°
C25C26C33O42148.4°0.4°
C25C26C27C281.3°0.1°
C26C25C24H9178.6°179.7°
C25C26C27H10178.7°180.0°
S12N15C23C2860.6°117.1°
S12N15C16H1731.1°22.8°
S12N15C16H1885.1°142.8°
O13S12N15C2366.4°161.9°
N15C23C28C27175.7°180.0°
N15C23C24H93.9°0.2°
C23N15C16H17159.7°157.2°
C23N15C16H1884.1°37.2°
N15C23C28H214.3°0.1°
C19C2C18C111.7°0.1°
C19C2C18H5180.0°179.9°
C2C19C9H1177.4°179.8°
C19C2C18H3178.3°180.0°
C2C19C16H1781.3°31.4°
C2C19C16H18162.5°151.4°
F35C34C33C26177.3°60.0°
F35C34C33C3858.6°60.0°
F35C34C33O4259.1°180.0°
C34C33C26C38122.8°120.0°
C34C33C26O42113.8°120.0°
C34C33C26C27143.0°59.6°
C34C33C38F4062.9°65.8°
C34C33C38O42113.8°120.0°
C34C33C38F4156.6°174.2°
C34C33C38F39176.7°54.3°
C34C33O42H11180.0°60.0°
C23C28C27C260.6°0.1°
C23C28C27H21180.0°179.9°
C28C23C24H9176.8°179.7°
C23C28C27H10179.5°180.0°
C1C17C12H19180.0°179.3°
C1C17C12C11179.4°179.5°
C17C1C15H4180.0°179.5°
C1C17C12C130.9°0.5°
C17C1C15C140.0°0.5°
C17C1C15H8180.0°180.0°
C17C12C11C13178.5°180.0°
C17C12C11C18150.6°180.0°
C12C17C1C150.9°0.7°
C17C12C13C140.0°0.0°
C17C12C13H2180.0°179.7°
C12C17C1H4179.1°179.8°
C12C11C18C2179.9°179.9°
C11C12C13C14178.5°180.0°
C11C12C13H21.5°0.3°
C12C11C18H30.1°0.0°
C12C11C10H60.2°0.1°
C11C12C17H190.6°0.2°
C11C18C2H3180.0°179.9°
C18C11C12C1330.9°0.1°
C11C18C2H5178.4°179.9°
C18C11C10H6179.7°180.0°
C26C33C38F4059.6°174.2°
C26C33C38O42123.7°120.0°
C33C26C27C28178.9°180.0°
C26C33C38F41179.1°54.2°
C26C33C38F3960.8°65.8°
C33C26C27H101.0°0.0°
C26C33O42H1162.6°60.0°
C33C26C25H201.4°0.0°
C27C26C33C3894.2°60.4°
C27C26C33O4229.2°179.6°
C26C27C28H10180.0°180.0°
C27C26C25H20179.1°180.0°
C26C27C28H21179.4°180.0°
F40C38C33F41119.5°120.0°
F40C38C33F39120.4°120.0°
F40C38C33O42176.6°54.2°
F40C38F41F39114.4°120.0°
C1C15C14H8180.0°179.5°
C1C15C14C130.9°0.0°
C1C15C14H7179.1°180.0°
C15C1C17H19179.2°180.0°
C33C38F41F39123.4°120.0°
C38C33O42H1162.2°180.0°
O42C33C38F4157.2°65.8°
O42C33C38F3963.0°174.3°
C12C13C14C150.9°0.2°
C12C13C14H2180.0°179.7°
C12C13C14H7179.1°179.7°
C13C12C17H19179.2°179.7°
C15C14C13H7180.0°179.9°
C15C14C13H2179.1°180.0°
C14C15C1H4180.0°180.0°
C13C14C15H8179.1°179.5°
H1C9C10H61.4°0.2°
H2C13C14H70.9°0.0°
H3C18C2H51.6°0.1°
H4C1C15H80.0°0.5°
H4C1C17H190.8°0.5°
H7C14C15H80.9°0.5°
H9C24C25H201.4°0.2°
H10C27C28H210.6°0.0°
H12C02C03H130.1°0.0°
H13C03C04H140.3°0.0°
H14C04C05H150.4°0.0°
H15C05C06H160.1°0.3°

250835

PDB entries from 2026-03-18

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