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Y4J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C30C29sing1.50Å1.49Å
C30C24sing1.52Å1.54Å
O01C02doub1.21Å1.20Å
C29C28doub1.29Å1.33Å
C24C23sing1.52Å1.53Å
C24C25sing1.53Å1.52Å
C02N03sing1.34Å1.40Å
C02C06sing1.51Å1.53Å
N03C04sing1.47Å1.45Å
C21O20sing1.45Å1.43Å
C21C22sing1.53Å1.56Å
C28C26sing1.51Å1.50Å
O31C19doub1.22Å1.22Å
C23C22sing1.53Å1.56Å
C25C26sing1.53Å1.52Å
O20C19sing1.35Å1.40Å
C06C07sing1.53Å1.53Å
C06C05sing1.55Å1.54Å
C19N18sing1.35Å1.38Å
C04C05sing1.54Å1.54Å
C22C27sing1.53Å1.55Å
C26C27sing1.54Å1.54Å
C17C15sing1.53Å1.51Å
C07C08sing1.53Å1.58Å
N18C13sing1.46Å1.47Å
C13C12sing1.51Å1.57Å
C13C14sing1.53Å1.53Å
N11C12sing1.35Å1.41Å
N11C08sing1.47Å1.48Å
C12O32doub1.21Å1.20Å
C08C09sing1.53Å1.53Å
C15C14sing1.53Å1.52Å
C15C16sing1.53Å1.53Å
C09O10sing1.43Å1.41Å
N11H1sing0.97Å1.00Å
C14H2sing1.09Å1.10Å
C14H3sing1.09Å1.10Å
N18H4sing0.97Å1.00Å
C21H5sing1.09Å1.10Å
C21H6sing1.09Å1.10Å
C22H7sing1.09Å1.10Å
C23H8sing1.09Å1.10Å
C23H9sing1.09Å1.10Å
C24H10sing1.09Å1.10Å
C25H11sing1.09Å1.10Å
C25H12sing1.09Å1.10Å
C26H13sing1.09Å1.10Å
C27H14sing1.09Å1.10Å
C27H15sing1.09Å1.10Å
C04H16sing1.09Å1.10Å
C04H17sing1.09Å1.10Å
C05H18sing1.09Å1.10Å
C05H19sing1.09Å1.10Å
C06H20sing1.09Å1.10Å
C07H21sing1.09Å1.10Å
C07H22sing1.09Å1.10Å
C08H23sing1.09Å1.10Å
C09H44sing1.09Å1.10Å
C09S1sing1.81Å1.10Å
C13H26sing1.09Å1.10Å
C15H27sing1.09Å1.10Å
C16H28sing1.09Å1.10Å
C16H29sing1.09Å1.10Å
C16H30sing1.09Å1.10Å
C17H31sing1.09Å1.10Å
C17H32sing1.09Å1.10Å
C17H33sing1.09Å1.10Å
C28H34sing1.08Å1.08Å
C29H35sing1.08Å1.08Å
C30H36sing1.09Å1.10Å
C30H37sing1.09Å1.10Å
N03H38sing0.97Å1.00Å
O10H39sing0.97Å0.95Å
S1O2doub1.42Å1.10Å
S1O3sing1.52Å1.10Å
S1O1doub1.42Å1.10Å
O3H24sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C29C30C24112.3°111.4°
C30C29C28123.7°124.7°
C30C29H35118.2°117.7°
C29C30H36108.8°109.1°
C29C30H37108.8°109.1°
C30C24C23111.6°111.9°
C30C24C25110.5°109.8°
C30C24H10107.8°107.6°
C24C30H36108.7°109.1°
C24C30H37108.7°109.1°
O01C02N03124.1°125.0°
O01C02C06128.4°124.9°
C29C28C26121.2°123.3°
C29C28H34119.4°118.3°
C28C29H35118.1°117.6°
C23C24C25110.8°111.0°
C24C23C22117.1°111.1°
C24C23H8107.5°109.2°
C24C23H9107.5°109.1°
C23C24H10107.9°108.2°
C24C25C26107.6°108.4°
C25C24H10108.1°108.2°
C24C25H11110.0°109.7°
C24C25H12109.9°109.7°
N03C02C06107.5°110.1°
C02N03C04114.6°111.3°
C02N03H38122.7°124.3°
C02C06C07114.4°110.5°
C02C06C05103.9°104.2°
C02C06H20108.7°110.5°
N03C04C05103.3°105.4°
N03C04H16111.0°110.2°
N03C04H17111.0°110.3°
C04N03H38122.7°124.4°
O20C21C22118.1°109.5°
C21O20C19116.5°117.1°
O20C21H5107.2°109.4°
O20C21H6107.2°109.5°
C21C22C23112.8°109.5°
C21C22C27114.0°109.5°
C22C21H5107.3°109.5°
C22C21H6107.3°109.5°
C21C22H7107.3°109.5°
C28C26C25106.1°109.1°
C28C26C27111.8°107.7°
C28C26H13109.0°111.0°
C26C28H34119.4°118.4°
O31C19O20119.3°120.0°
O31C19N18122.4°120.0°
C23C22C27107.7°109.4°
C23C22H7107.2°109.5°
C22C23H8107.5°109.1°
C22C23H9107.6°109.2°
C25C26C27112.6°107.9°
C26C25H11109.9°109.6°
C26C25H12109.9°109.7°
C25C26H13108.8°110.5°
O20C19N18118.3°120.0°
C07C06C05112.1°110.5°
C06C07C08113.6°109.5°
C07C06H20108.8°110.4°
C06C07H21108.4°109.5°
C06C07H22108.5°109.5°
C06C05C04106.6°101.8°
C06C05H18110.2°111.0°
C06C05H19110.2°111.0°
C05C06H20108.7°110.6°
C19N18C13120.4°120.0°
C19N18H4119.8°119.9°
C05C04H16111.0°110.2°
C05C04H17111.0°110.3°
C04C05H18110.2°110.9°
C04C05H19110.2°111.0°
C22C27C26117.8°108.0°
C27C22H7107.5°109.5°
C22C27H14107.4°109.8°
C22C27H15107.3°109.7°
C27C26H13108.5°110.6°
C26C27H14107.3°109.8°
C26C27H15107.4°109.8°
C17C15C14113.0°109.5°
C17C15C16107.9°109.5°
C17C15H27108.4°109.5°
C15C17H31109.5°109.5°
C15C17H32109.5°109.5°
C15C17H33109.4°109.5°
C07C08N11110.9°109.4°
C07C08C09109.3°109.5°
C08C07H21108.4°109.4°
C08C07H22108.4°109.4°
C07C08H23108.8°109.5°
N18C13C12110.1°109.5°
N18C13C14111.1°109.5°
C13N18H4119.8°120.1°
N18C13H26109.0°109.5°
C12C13C14110.5°109.5°
C13C12N11118.6°120.0°
C13C12O32120.6°120.0°
C12C13H26107.8°109.4°
C13C14C15114.4°109.5°
C13C14H2108.2°109.5°
C13C14H3108.2°109.5°
C14C13H26108.2°109.5°
C12N11C08121.1°120.0°
N11C12O32120.7°120.0°
C12N11H1119.5°120.0°
N11C08C09108.4°109.5°
C08N11H1119.5°120.0°
N11C08H23110.0°109.4°
C08C09O10105.1°109.5°
C09C08H23109.3°109.5°
C08C09H44107.2°109.4°
C08C09S1110.5°109.5°
C14C15C16110.9°109.5°
C15C14H2108.2°109.5°
C15C14H3108.2°109.4°
C14C15H27108.3°109.4°
C16C15H27108.1°109.5°
C15C16H28109.5°109.5°
C15C16H29109.5°109.4°
C15C16H30109.5°109.5°
O10C09H44108.7°109.5°
O10C09S1110.5°109.5°
C09O10H39109.5°114.0°
H2C14H3109.5°109.4°
H5C21H6109.5°109.4°
H8C23H9109.5°109.1°
H11C25H12109.5°109.7°
H14C27H15109.5°109.8°
H16C04H17109.5°110.3°
H18C05H19109.5°110.9°
H21C07H22109.5°109.5°
H44C09S1114.3°109.4°
C09S1O2109.5°110.5°
C09S1O3109.5°104.5°
C09S1O1109.4°110.5°
H28C16H29109.4°109.5°
H28C16H30109.4°109.4°
H29C16H30109.5°109.5°
H31C17H32109.5°109.4°
H31C17H33109.5°109.5°
H32C17H33109.5°109.5°
H36C30H37109.5°109.1°
O2S1O3109.4°104.3°
O2S1O1109.5°121.0°
O3S1O1109.5°104.3°
S1O3H24109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C29C30C24H36120.4°120.5°
C29C30C24H37120.4°120.5°
C30C29C28H35180.0°179.9°
C29C30C24C23100.9°80.8°
C29C30C24C2522.8°43.0°
C30C29C28C2614.2°1.3°
C29C30C24H10140.8°160.5°
C30C29C28H34165.8°178.8°
C29C30H36H37118.7°119.0°
C24C30C29C2816.5°11.4°
C30C24C23C25123.6°123.1°
C30C24C23H10118.3°118.4°
C30C24C25H10117.8°117.2°
C30C24C23C2267.0°67.4°
C30C24C25C2663.6°65.6°
C30C24C23H8171.9°53.0°
C30C24C23H954.1°172.2°
C30C24C25H1156.1°54.1°
C30C24C25H12176.7°174.7°
C24C30C29H35163.5°168.7°
C24C30H36H37118.7°119.1°
O01C02N03C06179.9°179.7°
O01C02N03C04179.6°179.9°
O01C02C06C0745.4°77.8°
O01C02C06C05167.9°163.5°
O01C02C06H2076.5°44.7°
O01C02N03H380.4°0.1°
C29C28C26H34180.0°180.0°
C29C28C26C2527.1°22.8°
C29C28C26C2795.9°94.1°
C29C28C26H13144.1°144.8°
C28C29C30H36136.9°131.9°
C28C29C30H37103.9°109.1°
C23C24C25H10118.1°118.6°
C24C23C22C2183.4°63.1°
C24C23C22H8121.1°120.4°
C24C23C22H9121.1°120.4°
C23C24C25C2660.6°58.6°
C24C23C22C2743.3°56.9°
C24C23C22H7158.7°176.9°
C24C23H8H9116.5°119.2°
C23C24C25H11179.7°178.3°
C23C24C25H1259.1°61.1°
C23C24C30H36138.7°39.7°
C23C24C30H3719.6°158.7°
C24C25C26C2864.6°53.5°
C25C24C23C2256.6°55.7°
C24C25C26H11119.7°119.8°
C24C25C26H12119.7°119.7°
C24C25C26C2758.0°63.3°
C25C24C23H864.6°176.1°
C25C24C23H9177.7°64.8°
C24C25H11H12120.9°120.5°
C24C25C26H13178.2°175.8°
C25C24C30H3697.6°163.4°
C25C24C30H37143.3°77.5°
C02N03C04H38180.0°179.9°
N03C02C06C07134.5°102.4°
N03C02C06C0512.0°16.2°
C02N03C04C0512.7°17.0°
C02N03C04H16106.3°101.9°
C02N03C04H17131.7°136.0°
N03C02C06H20103.6°135.1°
C06C02N03C040.5°0.4°
C02C06C07C05117.9°114.8°
C02C06C07H20121.9°122.6°
C02C06C05H20115.7°118.7°
C02C06C05C0419.4°24.8°
C02C06C07C08174.2°66.5°
C02C06C05H18100.2°93.3°
C02C06C05H19139.0°143.0°
C02C06C07H2165.2°173.6°
C02C06C07H2253.6°53.5°
C06C02N03H38179.5°179.7°
N03C04C05C0619.6°25.4°
N03C04C05H16119.0°119.0°
N03C04C05H17119.0°119.1°
N03C04H16H17122.8°122.0°
N03C04C05H18100.0°92.7°
N03C04C05H19139.1°143.6°
O20C21C22H5121.2°119.9°
O20C21C22H6121.2°120.1°
C21O20C19O3115.7°0.0°
O20C21C22C23176.7°113.8°
C21O20C19N18163.2°179.9°
O20C21C22C2760.1°126.3°
O20C21H5H6116.0°120.0°
O20C21C22H758.8°6.3°
C21C22C23C27126.7°120.0°
C21C22C23H7117.9°120.1°
C22C21O20C19103.9°180.0°
C21C22C27H7118.7°120.0°
C21C22C27C2686.0°58.4°
C22C21H5H6116.1°120.1°
C21C22C23H8155.5°57.3°
C21C22C23H937.7°176.5°
C21C22C27H14152.8°178.1°
C21C22C27H1535.2°61.2°
C28C26C25C27122.6°116.8°
C28C26C25H13117.2°122.3°
C28C26C27C2268.7°52.5°
C28C26C27H13120.3°121.4°
C28C26C25H1155.1°66.3°
C28C26C25H12175.7°173.2°
C28C26C27H14170.1°172.2°
C28C26C27H1552.5°67.1°
C26C28C29H35165.8°178.8°
O31C19O20N18178.9°180.0°
O31C19N18C1311.1°0.0°
O31C19N18H4168.9°180.0°
C23C22C27H7115.3°120.0°
C23C22C27C2640.0°61.5°
C23C22C21H562.1°6.2°
C23C22C21H655.4°126.2°
C22C23H8H9116.6°119.3°
C22C23C24H10174.7°174.3°
C23C22C27H1481.2°58.1°
C23C22C27H15161.2°178.9°
C25C26C27C2250.6°65.2°
C25C26C27H13120.4°120.9°
C26C25C24H10178.6°177.2°
C26C25H11H12120.8°120.5°
C25C26C27H1470.6°54.5°
C25C26C27H15171.8°175.2°
C25C26C28H34152.9°157.2°
O20C19N18C13167.7°180.0°
O20C19N18H412.2°0.0°
C19O20C21H5134.9°60.0°
C19O20C21H617.4°59.9°
C07C06C05H20120.3°122.5°
C07C06C05C04143.4°93.9°
C06C07C08H21120.6°120.0°
C06C07C08H22120.6°120.0°
C06C07C08N1161.7°67.9°
C06C07C08C09178.8°172.1°
C07C06C05H1823.9°148.0°
C07C06C05H1997.0°24.2°
C06C07H21H22118.2°120.1°
C06C07C08H2359.5°52.0°
C06C05C04H18119.6°118.1°
C06C05C04H19119.5°118.2°
C05C06C07C0867.8°178.8°
C06C05C04H1699.5°93.5°
C06C05C04H17138.6°144.5°
C06C05H18H19121.3°123.8°
C05C06C07H2152.7°58.8°
C05C06C07H22171.6°61.3°
C19N18C13H4180.0°180.0°
C19N18C13C1256.0°155.0°
C19N18C13C14178.8°85.0°
C19N18C13H2662.0°35.0°
C05C04H16H17122.8°122.0°
C04C05H18H19121.3°123.8°
C04C05C06H2096.2°143.5°
C05C04N03H38167.3°163.1°
C22C27C26H14121.2°119.6°
C22C27C26H15121.2°119.6°
C27C22C21H561.2°113.8°
C27C22C21H6178.7°6.3°
C27C22C23H877.8°177.3°
C27C22C23H9164.4°63.5°
C22C27C26H13171.0°173.9°
C22C27H14H15116.2°120.7°
C26C27C22H7155.3°178.5°
C27C26C25H11177.7°176.9°
C27C26C25H1261.7°56.4°
C26C27H14H15116.2°120.8°
C27C26C28H3484.1°85.9°
C17C15C14C1357.1°65.0°
C17C15C14C16121.4°120.0°
C17C15C14H27120.1°120.0°
C17C15C16H27117.1°120.0°
C17C15C14H2177.8°174.9°
C17C15C14H363.7°55.0°
C17C15C16H28180.0°60.0°
C17C15C16H2960.0°60.0°
C17C15C16H3060.0°180.0°
C15C17H31H32120.0°120.0°
C15C17H31H33120.0°120.0°
C15C17H32H33120.0°120.0°
C07C08N11C12110.9°157.7°
C07C08N11C09120.0°120.0°
C07C08N11H23120.5°120.0°
C07C08C09H23119.0°120.0°
C07C08C09O10174.9°53.2°
C07C08N11H169.1°22.0°
C08C07C06H2052.4°56.1°
C08C07H21H22118.1°119.9°
C07C08C09H4459.4°173.3°
C07C08C09S165.8°66.8°
N18C13C12C14123.2°120.0°
N18C13C12H26118.8°120.0°
N18C13C14H26119.7°120.0°
N18C13C12N11138.6°180.0°
N18C13C12O3238.5°0.0°
N18C13C14C1556.4°65.0°
N18C13C14H264.3°55.0°
N18C13C14H3177.1°175.0°
C12C13C14H26117.8°120.0°
C13C12N11O32177.2°180.0°
C13C12N11C08178.9°174.9°
C12C13C14C15179.0°175.0°
C13C12N11H11.1°5.4°
C12C13C14H258.2°65.0°
C12C13C14H360.3°55.0°
C12C13N18H4124.0°25.0°
C14C13C12N1198.2°60.0°
C14C13C12O3284.7°120.0°
C13C14C15H2120.7°120.1°
C13C14C15H3120.7°120.0°
C13C14C15C16178.5°175.0°
C13C14H2H3117.7°120.0°
C14C13N18H41.2°95.0°
C13C14C15H2763.0°55.0°
C12N11C08H1180.0°179.7°
C12N11C08C09129.0°82.3°
C12N11C08H239.6°37.7°
N11C12C13H2619.8°60.1°
C08N11C12O321.7°5.0°
N11C08C09H23119.9°120.0°
N11C08C09O1064.0°66.7°
N11C08C07H21177.7°172.0°
N11C08C07H2258.9°52.1°
N11C08C09H44179.6°53.3°
N11C08C09S155.3°173.2°
O32C12N11H1178.3°174.7°
O32C12C13H26157.3°120.0°
C08C09O10H44114.5°120.0°
C08C09O10S1119.3°120.0°
C09C08N11H151.0°98.0°
C09C08C07H2158.2°52.1°
C09C08C07H2260.6°67.9°
C08C09H44S1122.8°119.9°
C08C09O10H3990.7°60.0°
C08C09S1O2180.0°167.2°
C08C09S1O360.0°55.6°
C08C09S1O160.0°56.0°
C14C15C16H27118.6°119.9°
C15C14H2H3117.8°119.9°
C15C14C13H2663.3°55.0°
C14C15C16H2855.6°60.0°
C14C15C16H2964.4°179.9°
C14C15C16H30175.6°60.0°
C14C15C17H31180.0°60.0°
C14C15C17H3260.0°179.9°
C14C15C17H3360.0°60.0°
C16C15C14H260.8°54.9°
C16C15C14H357.8°65.0°
C15C16H28H29120.0°120.0°
C15C16H28H30120.0°120.0°
C15C16H29H30120.0°120.0°
C16C15C17H3156.9°180.0°
C16C15C17H3263.1°60.1°
C16C15C17H33176.9°60.0°
O10C09C08H2355.9°173.3°
O10C09H44S1124.0°120.1°
O10C09S1O264.0°72.7°
O10C09S1O3176.0°175.7°
O10C09S1O156.0°64.0°
H1N11C08H23170.4°142.0°
H2C14C13H26176.0°175.0°
H2C14C15H2757.7°65.1°
H3C14C13H2657.5°65.0°
H3C14C15H27176.2°175.0°
H4N18C13H26118.0°145.0°
H5C21C22H7180.0°126.2°
H6C21C22H762.5°113.8°
H7C22C23H837.6°62.7°
H7C22C23H980.2°56.5°
H7C22C27H1434.1°61.9°
H7C22C27H1583.5°58.9°
H8C23C24H1053.6°65.4°
H9C23C24H1064.2°53.8°
H10C24C25H1161.7°63.1°
H10C24C25H1258.9°57.5°
H10C24C30H3620.3°79.1°
H10C24C30H3798.8°40.0°
H11C25C26H1362.0°56.0°
H12C25C26H1358.5°64.5°
H13C26C27H1449.8°66.4°
H13C26C27H1567.8°54.3°
H13C26C28H3435.9°35.2°
H16C04C05H18141.0°148.3°
H16C04C05H1920.1°24.6°
H16C04N03H3873.7°78.0°
H17C04C05H1819.0°26.4°
H17C04C05H19101.9°97.3°
H17C04N03H3848.3°44.0°
H18C05C06H20144.2°25.4°
H19C05C06H2023.3°98.3°
H20C06C07H21173.0°63.9°
H20C06C07H2268.2°176.1°
H21C07C08H2361.1°68.0°
H22C07C08H23179.9°172.0°
H23C08C09H4459.7°66.7°
H23C08C09S1175.2°53.2°
H44C09O10H39154.8°60.0°
H44C09S1O259.0°47.3°
H44C09S1O361.0°64.3°
H44C09S1O1179.0°176.0°
S1C09O10H3928.6°180.0°
C09S1O2O3120.0°111.8°
C09S1O2O1120.0°131.5°
C09S1O3O1120.0°116.1°
C09S1O3H24120.0°180.0°
H27C15C16H2862.9°180.0°
H27C15C16H29177.1°60.0°
H27C15C16H3057.0°60.0°
H27C15C17H3160.0°60.0°
H27C15C17H32180.0°60.0°
H27C15C17H3360.0°NaN°
H28C16H29H30120.0°120.0°
H31C17H32H33120.0°120.0°
H34C28C29H3514.2°1.2°
H35C29C30H3643.1°48.2°
H35C29C30H3776.1°70.8°
O2S1O3O1120.0°127.8°
O2S1O3H240.0°63.9°
O1S1O3H24120.0°63.9°

248636

PDB entries from 2026-02-04

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