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SummaryGeometryRelated PDB entries

Y49

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O24C23doub1.21Å1.22Å
N25C23sing1.35Å1.43Å
C23C04sing1.48Å1.52Å
N09C08sing1.35Å1.36Å
N09C06sing1.38Å1.42Å
O22C08doub1.22Å1.36Å
C08N07sing1.35Å1.44Å
C04C06doub1.40Å1.43ÅAromatic
C04N02sing1.33Å1.35ÅAromatic
C06C05sing1.41Å1.44ÅAromatic
N02C01doub1.32Å1.40ÅAromatic
N07C05sing1.38Å1.43Å
N07C10sing1.40Å1.47Å
C05N03doub1.32Å1.37ÅAromatic
C12C10doub1.39Å1.40ÅAromatic
C12C14sing1.38Å1.40ÅAromatic
C10C11sing1.39Å1.41ÅAromatic
C01N03sing1.33Å1.37ÅAromatic
C01C16sing1.48Å1.52Å
C14C15doub1.38Å1.40ÅAromatic
C17C16doub1.39Å1.41ÅAromatic
C17C19sing1.38Å1.42ÅAromatic
C11C13doub1.38Å1.40ÅAromatic
C16C18sing1.40Å1.40ÅAromatic
C15C13sing1.38Å1.39ÅAromatic
C19C21doub1.40Å1.39ÅAromatic
C18C20doub1.38Å1.41ÅAromatic
C21C20sing1.40Å1.40ÅAromatic
C21C26sing1.48Å1.54Å
C26O28doub1.21Å1.26Å
C26O27sing1.35Å1.26Å
N09H1sing0.97Å1.00Å
C11H2sing1.08Å1.08Å
C12H3sing1.08Å1.08Å
C13H4sing1.08Å1.08Å
C14H5sing1.08Å1.08Å
C15H6sing1.08Å1.08Å
C17H7sing1.08Å1.08Å
C18H8sing1.08Å1.08Å
C19H9sing1.08Å1.08Å
C20H10sing1.08Å1.08Å
N25H11sing0.97Å1.00Å
N25H12sing0.97Å1.00Å
O27H13sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O24C23N25118.4°120.1°
O24C23C04120.4°120.0°
N25C23C04121.2°119.9°
C23N25H11120.0°120.1°
C23N25H12120.0°119.9°
C23C04C06122.7°120.7°
C23C04N02116.2°120.7°
C08N09C06103.8°108.3°
N09C08O22125.8°125.1°
N09C08N07115.1°109.8°
C08N09H1128.1°125.9°
N09C06C04133.7°134.6°
N09C06C05110.7°106.9°
C06N09H1128.1°125.8°
O22C08N07119.2°125.1°
C08N07C05103.5°108.4°
C08N07C10128.2°125.8°
C06C04N02121.1°118.6°
C04C06C05115.6°118.6°
C04N02C01119.9°121.0°
C06C05N07107.0°106.6°
C06C05N03123.3°119.0°
N02C01N03122.8°122.2°
N02C01C16119.2°118.9°
C05N07C10128.3°125.8°
N07C05N03129.7°134.4°
N07C10C12121.6°120.0°
N07C10C11120.5°120.0°
C05N03C01117.2°120.7°
C10C12C14120.8°119.9°
C12C10C11118.0°119.9°
C10C12H3119.6°120.1°
C12C14C15121.0°120.1°
C14C12H3119.6°120.1°
C12C14H5119.5°119.9°
C10C11C13120.8°119.9°
C10C11H2119.6°120.1°
N03C01C16117.8°118.9°
C01C16C17122.5°120.0°
C01C16C18122.9°119.9°
C14C15C13118.4°120.2°
C15C14H5119.5°120.0°
C14C15H6120.8°119.9°
C16C17C19123.2°120.0°
C17C16C18114.5°120.1°
C16C17H7118.4°120.0°
C17C19C21120.9°119.9°
C19C17H7118.4°120.0°
C17C19H9119.5°120.0°
C11C13C15121.0°120.0°
C13C11H2119.6°120.0°
C11C13H4119.5°120.0°
C16C18C20122.4°120.0°
C16C18H8118.8°120.0°
C15C13H4119.5°120.0°
C13C15H6120.8°119.9°
C19C21C20116.6°120.0°
C19C21C26123.5°120.0°
C21C19H9119.6°120.0°
C18C20C21122.4°120.0°
C20C18H8118.8°120.0°
C18C20H10118.8°119.9°
C20C21C26119.9°120.0°
C21C20H10118.8°120.1°
C21C26O28120.6°120.0°
C21C26O27113.8°120.0°
O28C26O27125.6°120.0°
C26O27H13109.5°117.0°
H11N25H12120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O24C23N25C04178.8°180.0°
O24C23C04C062.6°0.0°
O24C23C04N02178.1°179.8°
O24C23N25H110.0°180.0°
O24C23N25H12180.0°0.1°
N25C23C04C06176.1°180.0°
N25C23C04N023.1°0.3°
C23N25H11H12180.0°179.9°
C23C04C06N090.7°0.3°
C23C04C06N02179.2°179.7°
C23C04C06C05179.6°179.9°
C23C04N02C01178.4°179.7°
C04C23N25H11178.8°0.0°
C04C23N25H121.3°179.9°
C08N09C06H1180.0°179.4°
N09C08O22N07179.9°179.2°
C08N09C06C04179.7°179.4°
C08N09C06C050.0°0.3°
N09C08N07C050.1°0.7°
N09C08N07C10179.9°179.2°
C06N09C08O22180.0°179.9°
C06N09C08N070.1°0.6°
N09C06C04C05179.7°179.6°
N09C06C04N02179.9°179.9°
N09C06C05N070.0°0.1°
N09C06C05N03180.0°179.7°
O22C08N07C05179.9°180.0°
O22C08N07C100.0°0.1°
O22C08N09H10.0°0.7°
C08N07C05C060.1°0.5°
C08N07C05C10180.0°179.9°
C08N07C05N03179.9°179.9°
C08N07C10C1217.1°179.7°
C08N07C10C11163.3°0.1°
N07C08N09H1179.9°180.0°
C06C04N02C010.9°0.0°
C04C06C05N07179.7°179.9°
C04C06C05N030.2°0.6°
C04C06N09H10.3°0.0°
N02C04C06C050.4°0.3°
C04N02C01N032.5°0.0°
C04N02C01C16178.1°179.7°
C06C05N07N03180.0°179.4°
C06C05N07C10179.9°179.4°
C06C05N03C011.2°0.6°
C05C06N09H1180.0°179.6°
N02C01N03C052.6°0.3°
N02C01N03C16175.7°179.8°
N02C01C16C1714.8°179.5°
N02C01C16C18169.4°0.2°
C05N07C10C12162.9°0.3°
C05N07C10C1116.6°180.0°
N07C05N03C01178.9°180.0°
C10N07C05N030.0°0.0°
N07C10C12C11179.6°179.7°
N07C10C12C14180.0°180.0°
N07C10C11C13180.0°180.0°
N07C10C11H20.0°0.0°
N07C10C12H30.0°0.0°
C05N03C01C16178.3°180.0°
C10C12C14H3180.0°180.0°
C10C12C14C150.2°0.0°
C12C10C11C130.4°0.3°
C12C10C11H2179.6°179.8°
C10C12C14H5179.8°180.0°
C14C12C10C110.4°0.3°
C12C14C15H5180.0°180.0°
C12C14C15C130.1°0.3°
C12C14C15H6179.9°179.9°
C10C11C13H2180.0°180.0°
C10C11C13C150.3°0.0°
C11C10C12H3179.6°179.7°
C10C11C13H4179.7°180.0°
N03C01C16C17161.0°0.3°
N03C01C16C1814.8°180.0°
C01C16C17C18176.1°179.7°
C01C16C17C19177.6°180.0°
C01C16C18C20177.9°180.0°
C01C16C17H72.4°0.0°
C01C16C18H82.1°0.0°
C14C15C13C110.1°0.3°
C14C15C13H6180.0°179.8°
C15C14C12H3179.8°180.0°
C14C15C13H4179.9°179.8°
C16C17C19H7180.0°180.0°
C16C17C19C210.9°0.0°
C17C16C18C201.8°0.3°
C17C16C18H8178.2°179.7°
C16C17C19H9179.1°179.9°
C19C17C16C181.5°0.3°
C17C19C21H9180.0°179.9°
C17C19C21C200.5°0.3°
C17C19C21C26178.5°179.9°
C11C13C15H4180.0°180.0°
C11C13C15H6179.9°179.9°
C16C18C20H8180.0°180.0°
C16C18C20C211.5°0.0°
C18C16C17H7178.5°179.7°
C16C18C20H10178.5°180.0°
C15C13C11H2179.7°180.0°
C13C15C14H5179.9°179.7°
C19C21C20C180.8°0.3°
C19C21C20C26178.1°179.8°
C19C21C26O2821.0°0.0°
C19C21C26O27159.3°180.0°
C21C19C17H7179.1°180.0°
C19C21C20H10179.2°179.7°
C18C20C21H10180.0°180.0°
C18C20C21C26178.9°179.9°
C20C21C26O28161.1°179.8°
C20C21C26O2718.7°0.2°
C21C20C18H8178.5°180.0°
C20C21C19H9179.5°179.8°
C21C26O28O27179.7°180.0°
C26C21C19H91.5°0.0°
C26C21C20H101.1°0.1°
C21C26O27H13179.7°180.0°
O28C26O27H130.0°0.0°
H2C11C13H40.2°0.0°
H3C12C14H50.2°0.0°
H4C13C15H60.1°0.0°
H5C14C15H60.1°0.1°
H7C17C19H90.9°0.1°
H8C18C20H101.5°0.0°

222415

PDB entries from 2024-07-10

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