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Y3M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O17C16doub1.22Å1.22Å
C16O18sing1.35Å1.45Å
C16C7sing1.41Å1.50Å
O18C19sing1.43Å1.43Å
C19C20sing1.53Å1.52Å
C7C3doub1.40Å1.49ÅAromatic
C7N6sing1.38Å1.36ÅAromatic
C3C4sing1.41Å1.45ÅAromatic
C3N1sing1.35Å1.35Å
N6C5sing1.36Å1.37ÅAromatic
C5C4doub1.34Å1.42ÅAromatic
C4C2sing1.51Å1.45Å
C2C8sing1.52Å1.47Å
C2C15sing1.51Å1.47Å
C8C13doub1.34Å1.50Å
C8C9sing1.41Å1.50Å
C13O14sing1.35Å1.22Å
C13C12sing1.51Å1.50Å
C12C11sing1.53Å1.53Å
C11C10sing1.53Å1.54Å
C10C9sing1.51Å1.52Å
C9N1doub1.31Å1.35Å
C15O24sing1.35Å1.35ÅAromatic
C15C21doub1.35Å1.39ÅAromatic
O24C23sing1.34Å1.35ÅAromatic
C23C22doub1.35Å1.40ÅAromatic
C23S25sing1.76Å1.74Å
C22C21sing1.41Å1.39ÅAromatic
S25C26sing1.76Å1.74Å
C26N28doub1.31Å1.33ÅAromatic
C26N27sing1.37Å1.33ÅAromatic
N28C29sing1.36Å1.35ÅAromatic
C29C34sing1.40Å1.39ÅAromatic
C29C30doub1.40Å1.40ÅAromatic
C34C33doub1.38Å1.39ÅAromatic
C33C32sing1.39Å1.39ÅAromatic
C32C31doub1.38Å1.38ÅAromatic
C31C30sing1.39Å1.40ÅAromatic
C30N27sing1.39Å1.34ÅAromatic
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C20H203sing1.09Å1.10Å
N6H6sing0.97Å1.00Å
C5H5sing1.08Å1.08Å
C2H2sing1.09Å1.10Å
O14H14sing0.97Å0.95Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
N27H27sing0.97Å1.00Å
C34H34sing1.08Å1.08Å
C33H33sing1.08Å1.08Å
C32H32sing1.08Å1.08Å
C31H31sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O17C16O18118.5°120.0°
O17C16C7122.0°120.0°
O18C16C7119.4°120.0°
C16O18C19120.2°117.0°
C16C7C3119.1°126.4°
C16C7N6130.5°126.4°
O18C19C20109.5°109.5°
O18C19H191109.5°109.5°
O18C19H192109.5°109.5°
C20C19H191109.5°109.4°
C20C19H192109.5°109.5°
C19C20H201109.5°109.5°
C19C20H202109.4°109.4°
C19C20H203109.5°109.5°
C3C7N6110.3°107.2°
C7C3C4101.7°106.2°
C7C3N1135.0°132.7°
C7N6C5109.8°108.9°
C7N6H6125.1°125.5°
C4C3N1123.3°121.1°
C3C4C5109.5°108.5°
C3C4C2123.4°117.7°
C3N1C9118.7°125.5°
N6C5C4108.6°109.2°
C5N6H6125.1°125.6°
N6C5H5125.7°125.4°
C5C4C2127.1°133.8°
C4C5H5125.6°125.4°
C4C2C8111.0°115.8°
C4C2C15106.6°108.2°
C4C2H2109.0°108.2°
C8C2C15112.8°108.2°
C2C8C13117.9°119.6°
C2C8C9122.2°118.1°
C8C2H2108.7°108.2°
C2C15O24120.0°125.8°
C2C15C21124.7°125.7°
C15C2H2108.7°107.9°
C13C8C9119.8°122.2°
C8C13O14120.0°119.3°
C8C13C12119.5°121.4°
C8C9C10119.0°119.5°
C8C9N1121.5°121.7°
O14C13C12120.5°119.3°
C13O14H14109.5°113.9°
C13C12C11110.7°109.3°
C13C12H121109.1°109.5°
C13C12H122109.2°109.5°
C12C11C10112.1°108.8°
C11C12H121109.2°109.5°
C11C12H122109.2°109.5°
C12C11H111108.8°109.6°
C12C11H112108.8°109.6°
C11C10C9110.2°109.2°
C10C11H111108.8°109.5°
C10C11H112108.8°109.6°
C11C10H101109.3°109.5°
C11C10H102109.3°109.5°
C10C9N1119.5°118.7°
C9C10H101109.3°109.5°
C9C10H102109.3°109.5°
O24C15C21115.2°108.5°
C15O24C23101.0°109.5°
C15C21C22104.3°107.0°
C15C21H21127.8°126.5°
O24C23C22115.2°108.3°
O24C23S25118.5°125.9°
C22C23S25126.3°125.8°
C23C22C21104.3°106.8°
C23C22H22127.9°126.6°
C23S25C26112.4°100.0°
C22C21H21127.8°126.6°
C21C22H22127.8°126.6°
S25C26N28124.3°125.1°
S25C26N27119.9°125.1°
N28C26N27115.7°109.9°
C26N28C29103.2°109.6°
C26N27C30104.0°107.2°
C26N27H27128.0°126.4°
N28C29C34131.7°133.4°
N28C29C30108.7°107.2°
C34C29C30119.6°119.5°
C29C34C33119.4°119.8°
C29C34H34120.3°120.1°
C29C30C31120.7°120.0°
C29C30N27108.4°106.1°
C34C33C32120.8°120.5°
C33C34H34120.3°120.1°
C34C33H33119.6°119.8°
C33C32C31120.1°120.4°
C32C33H33119.6°119.7°
C33C32H32119.9°119.7°
C32C31C30119.3°119.9°
C31C32H32119.9°119.9°
C32C31H31120.4°120.0°
C31C30N27130.9°133.9°
C30C31H31120.4°120.1°
C30N27H27128.0°126.4°
H191C19H192109.5°109.4°
H201C20H202109.5°109.5°
H201C20H203109.5°109.5°
H202C20H203109.5°109.4°
H121C12H122109.5°109.5°
H111C11H112109.5°109.7°
H101C10H102109.4°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O17C16O18C7179.7°179.7°
O17C16O18C191.0°0.0°
O17C16C7C3179.4°0.0°
O17C16C7N60.6°179.7°
C16O18C19C2094.4°180.0°
O18C16C7C30.3°179.7°
O18C16C7N6179.8°0.6°
C16O18C19H191145.6°60.0°
C16O18C19H19225.6°60.0°
C7C16O18C19179.3°179.7°
C16C7C3N6179.9°179.7°
C16C7C3C4178.9°179.9°
C16C7C3N10.1°0.1°
C16C7N6C5179.4°180.0°
C16C7N6H60.6°0.0°
O18C19C20H191120.0°120.0°
O18C19C20H192120.0°120.0°
O18C19H191H192120.0°120.0°
O18C19C20H201180.0°180.0°
O18C19C20H20260.0°60.0°
O18C19C20H20360.0°60.0°
C20C19H191H192120.0°119.9°
C19C20H201H202120.0°120.0°
C19C20H201H203120.0°120.0°
C19C20H202H203120.0°120.0°
C7C3C4N1179.2°180.0°
C3C7N6C50.5°0.3°
C7C3C4C51.1°0.1°
C7C3C4C2178.7°180.0°
C7C3N1C9178.5°180.0°
C3C7N6H6179.5°179.7°
N6C7C3C41.0°0.2°
N6C7C3N1180.0°179.8°
C7N6C5H6180.0°180.0°
C7N6C5C40.2°0.2°
C7N6C5H5179.8°180.0°
C3C4C5N60.9°0.0°
C3C4C5C2179.7°179.8°
C3C4C2C80.1°0.1°
C3C4C2C15123.1°121.7°
C4C3N1C90.4°0.0°
C3C4C5H5179.2°179.9°
C3C4C2H2119.7°121.6°
N1C3C4C5179.7°179.8°
N1C3C4C20.5°0.0°
C3N1C9C80.4°0.0°
C3N1C9C10179.9°179.9°
N6C5C4H5180.0°179.9°
N6C5C4C2178.9°179.8°
C5C4C2C8179.6°179.8°
C5C4C2C1557.2°58.1°
C4C5N6H6179.8°179.8°
C5C4C2H259.9°58.6°
C4C2C8C15119.5°121.7°
C4C2C8H2119.8°121.6°
C4C2C15H2117.3°116.9°
C4C2C8C13179.5°179.8°
C4C2C8C90.7°0.1°
C4C2C15O2475.5°59.9°
C4C2C15C21102.0°119.7°
C2C4C5H51.1°0.0°
C8C2C15H2120.7°116.9°
C2C8C13C9179.7°179.9°
C2C8C13O140.8°0.1°
C2C8C13C12179.9°180.0°
C2C8C9C10179.4°179.9°
C2C8C9N11.0°0.1°
C8C2C15O24162.5°66.3°
C8C2C15C2120.1°114.1°
C15C2C8C1360.9°58.1°
C15C2C8C9118.8°121.7°
C2C15O24C21177.7°179.7°
C2C15O24C23176.5°180.0°
C2C15C21C22176.9°179.9°
C2C15C21H213.1°0.0°
C8C13O14C12179.0°179.9°
C8C13C12C1128.2°29.4°
C13C8C9C100.3°0.3°
C13C8C9N1179.3°179.8°
C13C8C2H259.7°58.6°
C8C13O14H14180.0°180.0°
C8C13C12H12192.0°149.4°
C8C13C12H122148.4°90.5°
C9C8C13O14178.9°179.9°
C9C8C13C120.1°0.2°
C8C9C10C1128.6°29.6°
C8C9C10N1179.6°179.9°
C9C8C2H2120.6°121.6°
C8C9C10H10191.5°149.5°
C8C9C10H102148.7°90.3°
O14C13C12C11152.8°150.6°
O14C13C12H12187.0°30.7°
O14C13C12H12232.6°89.4°
C13C12C11H121120.2°119.9°
C13C12C11H122120.2°120.0°
C13C12C11C1058.2°57.5°
C12C13O14H141.0°0.1°
C13C12H121H122119.4°120.1°
C13C12C11H111178.6°62.3°
C13C12C11H11262.2°177.4°
C12C11C10H111120.4°119.8°
C12C11C10H112120.4°119.9°
C12C11C10C958.4°57.5°
C11C12H121H122119.4°120.1°
C12C11H111H112118.8°120.4°
C12C11C10H10161.8°177.5°
C12C11C10H102178.5°62.4°
C11C10C9H101120.1°119.9°
C11C10C9H102120.1°119.9°
C11C10C9N1151.0°150.5°
C10C11C12H12161.9°177.5°
C10C11C12H122178.4°62.5°
C10C11H111H112118.8°120.3°
C11C10H101H102119.6°120.1°
C9C10C11H111178.7°62.2°
C9C10C11H11262.0°177.4°
C9C10H101H102119.7°120.2°
N1C9C10H10188.9°30.6°
N1C9C10H10230.9°89.7°
C15O24C23C221.4°0.0°
C15O24C23S25178.2°180.0°
O24C15C21C220.6°0.4°
O24C15C2H241.8°176.8°
O24C15C21H21179.3°179.7°
C21C15O24C231.2°0.3°
C15C21C22C230.2°0.4°
C15C21C22H21180.0°179.9°
C21C15C2H2140.7°2.8°
C15C21C22H22179.8°179.8°
O24C23C22S25179.6°180.0°
O24C23C22C211.1°0.3°
O24C23S25C2681.5°0.0°
O24C23C22H22178.9°180.0°
C23C22C21H22180.0°179.7°
C22C23S25C2698.9°180.0°
C23C22C21H21179.8°179.7°
S25C23C22C21178.5°179.8°
C23S25C26N28174.3°0.0°
C23S25C26N277.7°179.7°
S25C23C22H221.5°0.0°
S25C26N28N27178.1°179.8°
S25C26N28C29177.2°180.0°
S25C26N27C30177.3°179.8°
S25C26N27H272.7°0.0°
C26N28C29C34178.3°179.9°
C26N28C29C300.6°0.0°
N28C26N27C300.8°0.4°
N28C26N27H27179.2°179.7°
N27C26N28C290.9°0.2°
C26N27C30C290.3°0.4°
C26N27C30C31178.5°179.9°
C26N27C30H27180.0°179.9°
N28C29C34C30178.8°179.9°
N28C29C34C33177.8°180.0°
N28C29C30C31179.2°180.0°
N28C29C30N270.2°0.2°
N28C29C34H342.2°0.1°
C29C34C33H34180.0°179.9°
C29C34C33C321.0°0.0°
C34C29C30C310.1°0.1°
C34C29C30N27178.9°179.7°
C29C34C33H33179.0°180.0°
C30C29C34C331.1°0.0°
C29C30C31C321.4°0.0°
C29C30C31N27178.7°179.7°
C29C30N27H27179.6°179.8°
C30C29C34H34179.0°180.0°
C29C30C31H31178.6°180.0°
C34C33C32H33180.0°180.0°
C34C33C32C310.3°0.0°
C34C33C32H32179.7°180.0°
C33C32C31H32180.0°180.0°
C33C32C31C301.5°0.0°
C32C33C34H34179.1°179.9°
C33C32C31H31178.5°180.0°
C32C31C30H31180.0°180.0°
C32C31C30N27177.3°179.7°
C31C32C33H33179.7°180.0°
C31C30N27H271.5°0.0°
C30C31C32H32178.5°180.0°
N27C30C31H312.7°0.3°
H191C19C20H20160.0°59.9°
H191C19C20H202180.0°180.0°
H191C19C20H20360.0°60.1°
H192C19C20H20160.0°60.0°
H192C19C20H20260.0°60.1°
H192C19C20H203NaN°180.0°
H201C20H202H203120.0°120.0°
H6N6C5H50.2°0.1°
H121C12C11H11158.5°57.7°
H121C12C11H112177.7°62.7°
H122C12C11H11161.2°177.8°
H122C12C11H11258.0°57.4°
H111C11C10H10158.6°57.7°
H111C11C10H10261.1°177.8°
H112C11C10H101177.8°62.7°
H112C11C10H10258.1°57.5°
H21C21C22H220.2°0.0°
H34C34C33H331.0°0.0°
H33C33C32H320.3°0.0°
H32C32C31H311.5°0.0°

225946

PDB entries from 2024-10-09

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