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Y3B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C4sing1.50Å1.53Å
C1N2sing1.49Å1.45Å
N2C3sing1.50Å1.46Å
N2C22sing1.35Å1.43Å
C3C5sing1.51Å1.53Å
C4C5sing1.58Å1.56Å
C4C8sing1.51Å1.53Å
C5C6sing1.50Å1.53Å
C6N7sing1.49Å1.47Å
N7C8sing1.50Å1.45Å
N7C11sing1.35Å1.42Å
C11C12sing1.48Å1.49Å
C11O13doub1.22Å1.22Å
C12C14doub1.40Å1.46ÅAromatic
C12C16sing1.39Å1.42ÅAromatic
C14C15sing1.36Å1.38ÅAromatic
C15C18doub1.39Å1.42ÅAromatic
C16C17doub1.40Å1.43ÅAromatic
C17C18sing1.41Å1.44ÅAromatic
C17N21sing1.35Å1.40ÅAromatic
C18N19sing1.37Å1.40ÅAromatic
N19N20sing1.40Å1.33ÅAromatic
N20N21doub1.29Å1.32ÅAromatic
C22O23sing1.35Å1.48Å
C22O24doub1.22Å1.25Å
O23C25sing1.45Å1.50Å
C25C26sing1.51Å1.59Å
C26C27doub1.39Å1.43ÅAromatic
C26C31sing1.38Å1.40ÅAromatic
C27C28sing1.39Å1.40ÅAromatic
C27N32sing1.40Å1.40Å
C28C29doub1.39Å1.37ÅAromatic
C29C30sing1.40Å1.39ÅAromatic
C29C39sing1.43Å1.43Å
C30C31doub1.38Å1.40ÅAromatic
N32C33sing1.35Å1.38Å
C33O34doub1.21Å1.22Å
C33C35sing1.51Å1.53Å
C35C36sing1.53Å1.53Å
C35C37sing1.53Å1.53Å
C35C38sing1.53Å1.53Å
C39N40trip1.14Å1.16Å
C15H50sing1.08Å1.08Å
C16H51sing1.08Å1.08Å
C25H53sing1.09Å1.10Å
C25H54sing1.09Å1.10Å
C28H55sing1.08Å1.08Å
C1H42sing1.09Å1.10Å
C1H41sing1.09Å1.10Å
C3H44sing1.09Å1.10Å
C3H43sing1.09Å1.10Å
C4H9sing1.09Å1.10Å
C5H10sing1.09Å1.10Å
C6H46sing1.09Å1.10Å
C6H45sing1.09Å1.10Å
C8H47sing1.09Å1.10Å
C8H48sing1.09Å1.10Å
C14H49sing1.08Å1.08Å
N19H52sing0.97Å1.00Å
C30H56sing1.08Å1.08Å
C31H57sing1.08Å1.08Å
N32H58sing0.97Å1.00Å
C36H59sing1.09Å1.10Å
C36H61sing1.09Å1.10Å
C36H60sing1.09Å1.10Å
C37H63sing1.09Å1.10Å
C37H64sing1.09Å1.10Å
C37H62sing1.09Å1.10Å
C38H67sing1.09Å1.10Å
C38H65sing1.09Å1.10Å
C38H66sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4C1N299.9°104.8°
C1C4C594.8°99.7°
C1C4C8115.5°126.6°
C4C1H42111.8°110.4°
C4C1H41111.8°110.3°
C1C4H9116.5°110.0°
C1N2C3109.2°107.8°
C1N2C22121.1°126.1°
N2C1H42111.8°110.4°
N2C1H41111.8°110.4°
C3N2C22129.7°126.1°
N2C3C599.5°102.1°
N2C3H44111.9°110.8°
N2C3H43111.9°110.8°
N2C22O23116.4°120.0°
N2C22O24120.1°120.0°
C3C5C492.7°98.5°
C3C5C6115.8°126.6°
C5C3H44111.9°110.9°
C5C3H43111.9°110.9°
C3C5H10117.1°110.1°
C5C4C893.3°98.5°
C4C5C691.9°99.7°
C5C4H9115.8°110.0°
C4C5H10116.5°110.0°
C4C8N798.5°102.2°
C8C4H9116.4°109.8°
C4C8H47112.2°110.9°
C4C8H48112.1°110.9°
C5C6N7100.1°104.8°
C6C5H10117.1°109.7°
C5C6H46111.8°110.3°
C5C6H45111.8°110.4°
C6N7C8108.4°107.8°
C6N7C11123.6°126.1°
N7C6H46111.7°110.4°
N7C6H45111.7°110.4°
C8N7C11128.0°126.1°
N7C8H47112.1°110.8°
N7C8H48112.1°110.9°
N7C11C12125.4°120.0°
N7C11O13118.0°120.0°
C12C11O13116.6°120.0°
C11C12C14112.6°119.9°
C11C12C16125.3°119.9°
C14C12C16122.1°120.3°
C12C14C15122.3°120.5°
C12C14H49118.8°119.8°
C12C16C17114.8°119.6°
C12C16H51122.6°120.2°
C14C15C18116.6°120.1°
C14C15H50121.7°119.9°
C15C14H49118.9°119.8°
C15C18C17121.9°120.2°
C15C18N19132.7°133.7°
C18C15H50121.7°119.9°
C16C17C18122.2°119.3°
C16C17N21133.1°133.1°
C17C16H51122.6°120.2°
C18C17N21104.7°107.5°
C17C18N19105.4°106.1°
C17N21N20110.2°110.1°
C18N19N20109.8°106.7°
C18N19H52125.1°126.6°
N19N20N21109.9°109.6°
N20N19H52125.1°126.7°
O23C22O24123.3°120.0°
C22O23C25121.9°117.0°
O23C25C26120.8°109.5°
O23C25H53106.6°109.5°
O23C25H54106.6°109.5°
C25C26C27124.7°119.9°
C25C26C31119.5°119.8°
C26C25H53106.6°109.4°
C26C25H54106.5°109.5°
C27C26C31115.8°120.3°
C26C27C28121.8°120.0°
C26C27N32119.6°120.0°
C26C31C30122.3°120.2°
C26C31H57118.8°120.0°
C28C27N32118.5°120.0°
C27C28C29119.7°119.8°
C27C28H55120.2°120.1°
C27N32C33129.3°120.0°
C27N32H58115.4°120.0°
C28C29C30121.0°119.8°
C28C29C39118.6°120.1°
C29C28H55120.2°120.2°
C30C29C39120.3°120.1°
C29C30C31119.4°120.0°
C29C30H56120.3°120.0°
C29C39N40177.8°180.0°
C31C30H56120.3°120.0°
C30C31H57118.9°119.8°
N32C33O34123.1°120.0°
N32C33C35111.4°120.0°
C33N32H58115.4°120.0°
O34C33C35125.4°120.0°
C33C35C36107.7°109.5°
C33C35C37114.1°109.5°
C33C35C38106.8°109.5°
C36C35C37110.1°109.5°
C36C35C38108.7°109.4°
C35C36H59109.5°109.5°
C35C36H61109.5°109.4°
C35C36H60109.5°109.5°
C37C35C38109.3°109.5°
C35C37H63109.5°109.5°
C35C37H64109.5°109.5°
C35C37H62109.5°109.5°
C35C38H67109.5°109.5°
C35C38H65109.5°109.5°
C35C38H66109.5°109.5°
H53C25H54109.5°109.5°
H42C1H41109.5°110.4°
H44C3H43109.5°110.9°
H46C6H45109.5°110.4°
H47C8H48109.5°111.0°
H59C36H61109.5°109.5°
H59C36H60109.4°109.5°
H61C36H60109.5°109.5°
H63C37H64109.5°109.5°
H63C37H62109.5°109.4°
H64C37H62109.5°109.4°
H67C38H65109.5°109.5°
H67C38H66109.5°109.4°
H65C38H66109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4C1N2H42118.4°118.8°
C4C1N2H41118.4°118.8°
C4C1N2C317.1°7.5°
C4C1N2C22165.3°172.5°
C1C4C5C362.9°50.4°
C1C4C5C8115.9°129.6°
C1C4C5H9122.5°115.6°
C1C4C8H9142.1°136.2°
C1C4C5C6178.9°180.0°
C1C4C8N7151.8°154.7°
C4C1H42H41124.4°122.3°
C1C4C5H1059.4°64.7°
C1C4C8H4733.6°36.6°
C1C4C8H4890.0°87.2°
C1N2C3C22177.4°180.0°
C1N2C3C523.7°25.3°
N2C1C4C549.6°35.4°
N2C1C4C8145.6°143.7°
C1N2C22O2330.1°180.0°
C1N2C22O24144.8°0.1°
N2C1H42H41124.5°122.4°
C1N2C3H4494.7°92.9°
C1N2C3H43142.0°143.5°
N2C1C4H972.4°80.2°
N2C3C5H44118.3°118.1°
N2C3C5H43118.4°118.1°
N2C3C5C452.7°45.8°
N2C3C5C6146.1°154.7°
C3N2C22O23152.8°0.0°
C3N2C22O2432.3°179.9°
C3N2C1H42135.5°111.4°
C3N2C1H41101.4°126.3°
N2C3H44H43124.7°123.6°
N2C3C5H1069.0°69.2°
C22N2C3C5153.7°154.7°
N2C22O23O24174.8°179.9°
N2C22O23C25127.6°180.0°
C22N2C1H4246.9°68.6°
C22N2C1H4176.3°53.7°
C22N2C3H4487.9°87.1°
C22N2C3H4335.3°36.5°
C3C5C4C6116.0°129.6°
C3C5C4H10122.3°115.1°
C3C5C4C8178.8°180.0°
C3C5C6H10144.8°136.2°
C3C5C6N7145.4°143.7°
C5C3H44H43124.6°123.7°
C3C5C4H959.6°65.2°
C3C5C6H4627.0°24.8°
C3C5C6H4596.1°97.5°
C5C4C8H9121.0°114.9°
C4C5C6H10121.2°115.5°
C4C5C6N751.5°35.3°
C5C4C8N754.9°45.8°
C5C4C1H42168.0°83.5°
C5C4C1H4168.8°154.2°
C4C5C3H4465.6°72.3°
C4C5C3H43171.1°164.0°
C4C5C6H4667.0°83.5°
C4C5C6H45169.9°154.2°
C5C4C8H4763.3°72.3°
C5C4C8H48173.1°164.0°
C8C4C5C665.2°50.4°
C4C8N7C623.3°25.3°
C4C8N7H47118.2°118.1°
C4C8N7H48118.2°118.2°
C4C8N7C11154.5°154.7°
C8C4C1H4296.0°24.8°
C8C4C1H4127.1°97.5°
C8C4C5H1056.5°64.9°
C4C8H47H48125.1°123.7°
C5C6N7H46118.5°118.8°
C5C6N7H45118.5°118.8°
C5C6N7C818.9°7.5°
C5C6N7C11163.2°172.6°
C6C5C3H4427.8°36.6°
C6C5C3H4395.5°87.1°
C6C5C4H956.4°64.4°
C5C6H46H45124.4°122.3°
C6N7C8C11177.8°180.0°
C6N7C11C12165.5°176.3°
C6N7C11O1314.9°3.4°
N7C6C5H1069.8°80.2°
N7C6H46H45124.3°122.3°
C6N7C8H4794.9°92.8°
C6N7C8H48141.5°143.5°
C8N7C11C1217.0°3.6°
C8N7C11O13162.6°176.7°
N7C8C4H966.1°69.1°
C8N7C6H4699.6°111.3°
C8N7C6H45137.3°126.3°
N7C8H47H48125.1°123.6°
N7C11C12O13179.6°179.7°
N7C11C12C14129.1°33.0°
N7C11C12C1653.7°147.6°
C11N7C6H4678.3°68.6°
C11N7C6H4544.7°53.7°
C11N7C8H4787.3°87.2°
C11N7C8H4836.3°36.5°
C11C12C14C16177.2°179.4°
C11C12C14C15178.7°180.0°
C11C12C16C17179.0°179.7°
C11C12C16H511.0°0.3°
C11C12C14H491.3°0.1°
O13C11C12C1450.4°147.3°
O13C11C12C16126.7°32.1°
C12C14C15H49180.0°179.9°
C12C14C15C180.7°0.0°
C14C12C16C172.1°0.9°
C12C14C15H50179.3°179.6°
C14C12C16H51177.9°179.7°
C16C12C14C151.5°0.6°
C12C16C17H51180.0°179.4°
C12C16C17C182.2°0.6°
C12C16C17N21179.5°179.5°
C16C12C14H49178.5°179.5°
C14C15C18H50180.0°179.7°
C14C15C18C170.7°0.3°
C14C15C18N19180.0°179.8°
C15C18C17C161.6°0.0°
C15C18C17N19179.5°180.0°
C15C18C17N21179.7°180.0°
C15C18N19N20179.1°180.0°
C18C15C14H49179.3°179.9°
C15C18N19H520.9°0.0°
C16C17C18N21178.7°180.0°
C16C17C18N19178.9°180.0°
C16C17N21N20179.1°179.9°
C17C18N19N200.3°0.0°
C18C17N21N200.6°0.0°
C17C18C15H50179.2°179.9°
C18C17C16H51177.8°180.0°
C17C18N19H52179.7°180.0°
N21C17C18N190.2°0.0°
C17N21N20N190.8°0.1°
N21C17C16H510.5°0.1°
C18N19N20H52180.0°180.0°
C18N19N20N210.7°0.1°
N19C18C15H500.1°0.1°
N21N20N19H52179.3°180.0°
C22O23C25C26172.5°180.0°
C22O23C25H5366.0°60.0°
C22O23C25H5450.9°60.0°
O24C22O23C2547.1°0.1°
O23C25C26H53121.6°120.1°
O23C25C26H54121.6°120.0°
O23C25C26C270.5°180.0°
O23C25C26C31178.0°0.3°
O23C25H53H54114.9°120.0°
C25C26C27C31178.6°179.7°
C25C26C27C28179.8°180.0°
C25C26C27N322.4°0.1°
C25C26C31C30179.5°179.8°
C26C25H53H54114.9°119.9°
C25C26C31H570.5°0.0°
C26C27C28N32177.8°180.0°
C26C27C28C290.5°0.0°
C27C26C31C300.9°0.5°
C26C27N32C33175.6°145.5°
C27C26C25H53122.1°59.9°
C27C26C25H54121.0°60.0°
C26C27C28H55179.5°180.0°
C27C26C31H57179.1°179.7°
C26C27N32H584.5°34.4°
C31C26C27C281.3°0.3°
C31C26C27N32179.0°179.7°
C26C31C30C290.3°0.5°
C26C31C30H57180.0°179.7°
C31C26C25H5356.4°119.8°
C31C26C25H5460.4°120.3°
C26C31C30H56179.8°179.7°
C27C28C29H55180.0°180.0°
C27C28C29C300.7°0.0°
C27C28C29C39179.7°180.0°
C28C27N32C336.6°34.5°
C28C27N32H58173.4°145.6°
N32C27C28C29178.3°180.0°
C27N32C33H58180.0°179.9°
C27N32C33O343.2°4.0°
C27N32C33C35178.9°176.0°
N32C27C28H551.7°0.0°
C28C29C30C39179.5°180.0°
C28C29C30C311.1°0.2°
C28C29C39N400.6°15.1°
C28C29C30H56178.9°180.0°
C29C30C31H56180.0°179.8°
C30C29C39N40179.8°164.9°
C30C29C28H55179.3°180.0°
C29C30C31H57179.7°179.8°
C39C29C30C31179.4°179.8°
C39C29C28H550.2°0.0°
C39C29C30H560.6°0.0°
N32C33O34C35177.6°180.0°
N32C33C35C3669.3°180.0°
N32C33C35C37168.2°60.0°
N32C33C35C3847.3°60.0°
O34C33C35C36108.5°0.1°
O34C33C35C3714.0°119.9°
O34C33C35C38134.9°120.0°
O34C33N32H58176.8°176.1°
C33C35C36C37125.0°120.0°
C33C35C36C38115.4°120.0°
C33C35C37C38119.5°120.0°
C35C33N32H581.1°4.0°
C33C35C36H59180.0°60.0°
C33C35C36H6160.0°180.0°
C33C35C36H6060.0°60.0°
C33C35C37H63180.0°60.0°
C33C35C37H6460.0°180.0°
C33C35C37H6260.0°60.0°
C33C35C38H67180.0°60.0°
C33C35C38H6560.0°180.0°
C33C35C38H6660.0°60.0°
C36C35C37C38119.3°120.0°
C35C36H59H61120.0°120.0°
C35C36H59H60120.0°120.0°
C35C36H61H60120.0°120.0°
C36C35C37H6358.7°180.0°
C36C35C37H6461.2°60.0°
C36C35C37H62178.8°60.0°
C36C35C38H6764.0°60.0°
C36C35C38H65176.0°60.0°
C36C35C38H6656.0°180.0°
C37C35C36H5955.0°60.0°
C37C35C36H61175.0°60.0°
C37C35C36H6065.0°180.0°
C35C37H63H64120.0°120.1°
C35C37H63H62120.0°120.0°
C35C37H64H62120.0°120.0°
C37C35C38H6756.1°180.0°
C37C35C38H6563.9°60.0°
C37C35C38H66176.1°60.0°
C38C35C36H5964.6°180.0°
C38C35C36H6155.4°60.0°
C38C35C36H60175.4°60.0°
C38C35C37H6360.5°60.1°
C38C35C37H64179.5°60.0°
C38C35C37H6259.5°180.0°
C35C38H67H65120.0°120.1°
C35C38H67H66120.0°120.0°
C35C38H65H66120.0°120.0°
H50C15C14H490.7°0.3°
H42C1C4H946.1°160.9°
H41C1C4H9169.2°38.6°
H44C3C5H10172.6°172.7°
H43C3C5H1049.3°48.9°
H9C4C5H10178.1°179.7°
H9C4C8H47175.7°172.8°
H9C4C8H4852.1°49.0°
H10C5C6H46171.8°161.0°
H10C5C6H4548.7°38.7°
H56C30C31H570.3°0.1°
H59C36H61H60120.0°120.1°
H63C37H64H62120.0°120.0°
H67C38H65H66120.0°119.9°

250835

PDB entries from 2026-03-18

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