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Y34

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6Ssing1.76Å1.72ÅAromatic
C6C5doub1.34Å1.35ÅAromatic
O3C5sing1.38Å1.37Å
O3C4sing1.43Å1.45Å
SC1sing1.76Å1.73ÅAromatic
C5C2sing1.40Å1.42ÅAromatic
C4C3sing1.53Å1.51Å
C2C1doub1.37Å1.37ÅAromatic
C2O2sing1.38Å1.37Å
C1Csing1.41Å1.48Å
C3O2sing1.43Å1.46Å
O1Cdoub1.22Å1.21Å
COsing1.35Å1.30Å
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C6H3sing1.08Å1.08Å
OH4sing0.97Å0.95Å
C3H5sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
SC6C5111.2°110.7°
C6SC192.7°91.2°
SC6H3124.4°124.7°
C6C5O3124.5°124.1°
C6C5C2112.8°114.5°
C5C6H3124.4°124.6°
C5O3C4111.9°114.4°
O3C5C2122.7°121.4°
O3C4C3111.4°109.2°
O3C4H1109.0°109.5°
O3C4H2109.0°109.6°
SC1C2109.9°109.8°
SC1C120.0°125.1°
C5C2C1113.4°113.8°
C5C2O2122.8°121.8°
C4C3O2115.0°109.2°
C3C4H1109.0°109.5°
C3C4H2109.0°109.5°
C4C3H5108.1°109.5°
C4C3H6108.1°109.5°
C1C2O2123.5°124.5°
C2C1C130.0°125.1°
C2O2C3114.0°114.5°
C1CO1120.6°120.0°
C1CO116.0°120.0°
O2C3H5108.1°109.5°
O2C3H6108.1°109.6°
O1CO123.4°120.0°
COH4109.5°114.0°
H1C4H2109.5°109.5°
H5C3H6109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
SC6C5H3180.0°179.9°
SC6C5O3179.4°179.7°
SC6C5C20.4°0.1°
C6SC1C22.1°0.0°
C6SC1C179.0°180.0°
C6C5O3C2179.8°179.8°
C6C5O3C4152.6°163.3°
C5C6SC11.4°0.0°
C6C5C2C11.2°0.1°
C6C5C2O2172.7°179.7°
C5O3C4C348.0°46.5°
O3C5C2C1179.0°179.7°
O3C5C2O27.1°0.5°
C5O3C4H1168.3°166.4°
C5O3C4H272.3°73.5°
O3C5C6H30.6°0.2°
C4O3C5C227.2°16.5°
O3C4C3H1120.3°119.9°
O3C4C3H2120.3°120.0°
O3C4C3O252.7°62.2°
O3C4H1H2119.1°120.2°
O3C4C3H568.2°57.6°
O3C4C3H6173.5°177.8°
SC1C2C52.2°0.0°
SC1C2C176.5°180.0°
SC1C2O2171.6°179.7°
SC1CO11.1°180.0°
SC1CO178.9°0.1°
C1SC6H3178.6°180.0°
C5C2C1O2173.8°179.8°
C5C2C1C178.7°179.9°
C5C2O2C39.2°16.4°
C2C5C6H3179.6°180.0°
C4C3O2C232.0°46.4°
C4C3O2H5120.8°119.9°
C4C3O2H6120.8°120.0°
C3C4H1H2119.1°120.1°
C4C3H5H6117.5°120.2°
C1C2O2C3177.5°163.4°
C2C1CO1175.1°0.1°
C2C1CO4.9°180.0°
O2C2C1C4.9°0.3°
C2O2C3H588.9°73.5°
C2O2C3H6152.8°166.4°
C1CO1O180.0°179.9°
C1COH4180.0°180.0°
O2C3C4H1172.9°177.8°
O2C3C4H267.7°57.8°
O2C3H5H6117.5°120.1°
O1COH40.0°0.0°
H1C4C3H552.1°62.3°
H1C4C3H666.2°57.9°
H2C4C3H5171.5°177.6°
H2C4C3H653.2°62.2°

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PDB entries from 2024-10-09

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