Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

Y2Z

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.39Å1.39ÅAromatic
C1C6sing1.38Å1.41ÅAromatic
C2C3sing1.40Å1.47ÅAromatic
C2O16sing1.36Å1.36Å
C3C4doub1.39Å1.39ÅAromatic
C3C12sing1.48Å1.49Å
C4C5sing1.40Å1.38ÅAromatic
C5C6doub1.40Å1.37ÅAromatic
C5C21sing1.48Å1.47Å
C7C8sing1.38Å1.42ÅAromatic
C7C12doub1.39Å1.42ÅAromatic
C8C9doub1.38Å1.40ÅAromatic
C8CL15sing1.74Å1.71Å
C9C10sing1.38Å1.40ÅAromatic
C9C14sing1.51Å1.50Å
C10C11doub1.39Å1.40ÅAromatic
C11C12sing1.40Å1.40ÅAromatic
C11O13sing1.36Å1.35Å
O13C24sing1.43Å1.43Å
O16C17sing1.43Å1.29Å
C17F18sing1.40Å1.31Å
C17F19sing1.40Å1.37Å
C17F20sing1.40Å1.28Å
C21N22sing1.35Å1.36Å
C21O23doub1.22Å1.20Å
C24C25sing1.51Å1.50Å
C25N26sing1.37Å1.42Å
C25N29doub1.29Å1.34Å
N26C27sing1.35Å1.40Å
N26C30sing1.47Å1.46Å
C27N28sing1.35Å1.36Å
C27O31doub1.22Å1.21Å
N28N29sing1.40Å1.37Å
C10H36sing1.08Å1.08Å
C24H43sing1.09Å1.10Å
C24H42sing1.09Å1.10Å
C1H32sing1.08Å1.08Å
C4H33sing1.08Å1.08Å
C6H34sing1.08Å1.08Å
C7H35sing1.08Å1.08Å
C14H37sing1.09Å1.10Å
C14H38sing1.09Å1.10Å
C14H39sing1.09Å1.10Å
N22H41sing0.97Å1.00Å
N22H40sing0.97Å1.00Å
N28H44sing0.97Å1.00Å
C30H45sing1.09Å1.10Å
C30H47sing1.09Å1.10Å
C30H46sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6120.1°120.2°
C1C2C3117.7°120.1°
C1C2O16132.9°120.0°
C2C1H32119.9°119.9°
C1C6C5121.4°120.1°
C6C1H32119.9°119.9°
C1C6H34119.3°119.9°
C3C2O16108.3°120.0°
C2C3C4119.3°119.8°
C2C3C12125.1°120.1°
C2O16C17126.4°117.0°
C4C3C12115.4°120.1°
C3C4C5121.0°119.8°
C3C4H33119.5°120.1°
C3C12C7122.3°120.1°
C3C12C11119.9°120.2°
C4C5C6120.2°119.9°
C4C5C21120.1°120.0°
C5C4H33119.5°120.1°
C6C5C21119.0°120.0°
C5C6H34119.3°119.9°
C5C21N22116.9°120.0°
C5C21O23123.8°120.0°
C8C7C12117.3°119.9°
C7C8C9124.4°120.2°
C7C8CL15118.2°119.9°
C8C7H35121.4°120.1°
C7C12C11117.7°119.7°
C12C7H35121.4°120.0°
C9C8CL15117.3°119.9°
C8C9C10117.5°120.3°
C8C9C14124.2°119.8°
C10C9C14118.3°119.9°
C9C10C11119.0°120.1°
C9C10H36120.5°119.9°
C9C14H37109.5°109.4°
C9C14H38109.4°109.5°
C9C14H39109.5°109.5°
C10C11C12123.9°119.8°
C10C11O13121.2°120.1°
C11C10H36120.5°120.0°
C12C11O13114.9°120.1°
C11O13C24116.1°117.0°
O13C24C25112.3°109.4°
O13C24H43108.8°109.5°
O13C24H42108.8°109.5°
O16C17F18115.2°109.4°
O16C17F1994.6°109.5°
O16C17F20118.1°109.4°
F18C17F19112.2°109.5°
F18C17F20110.9°109.5°
F19C17F20103.9°109.5°
N22C21O23119.0°120.0°
C21N22H41120.0°120.0°
C21N22H40120.0°120.0°
C24C25N26123.1°125.5°
C24C25N29126.1°125.6°
C25C24H43108.7°109.4°
C25C24H42108.7°109.5°
N26C25N29110.4°108.8°
C25N26C27106.3°108.3°
C25N26C30130.1°125.9°
C25N29N28105.1°108.2°
C27N26C30123.5°125.8°
N26C27N28104.6°107.4°
N26C27O31126.3°126.3°
N26C30H45109.5°109.4°
N26C30H47109.5°109.4°
N26C30H46109.4°109.5°
N28C27O31129.1°126.3°
C27N28N29113.5°107.3°
C27N28H44123.3°126.3°
N29N28H44123.3°126.4°
H43C24H42109.5°109.5°
H37C14H38109.5°109.4°
H37C14H39109.5°109.5°
H38C14H39109.5°109.5°
H41N22H40120.0°120.0°
H45C30H47109.5°109.5°
H45C30H46109.5°109.5°
H47C30H46109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H32180.0°179.8°
C1C2C3O16169.7°180.0°
C1C2C3C45.7°0.0°
C1C2C3C12170.2°180.0°
C2C1C6C51.1°0.1°
C1C2O16C1740.8°0.0°
C2C1C6H34178.9°180.0°
C6C1C2C33.8°0.0°
C6C1C2O16170.4°180.0°
C1C6C5C44.4°0.1°
C1C6C5H34180.0°179.9°
C1C6C5C21166.1°180.0°
C2C3C4C12176.3°180.0°
C2C3C4C52.6°0.0°
C2C3C12C7110.1°115.0°
C2C3C12C1174.6°65.0°
C3C2O16C17126.7°180.0°
C3C2C1H32176.2°179.7°
C2C3C4H33177.4°180.0°
O16C2C3C4175.4°180.0°
O16C2C3C120.5°0.0°
C2O16C17F18163.7°59.9°
C2O16C17F1979.1°180.0°
C2O16C17F2029.3°60.0°
O16C2C1H329.5°0.3°
C3C4C5H33180.0°180.0°
C3C4C5C62.4°0.1°
C3C4C5C21168.0°179.9°
C4C3C12C765.9°65.0°
C4C3C12C11109.4°115.0°
C12C3C4C5173.7°179.9°
C3C12C7C8173.1°179.4°
C3C12C7C11175.4°180.0°
C3C12C11C10171.7°180.0°
C3C12C11O138.6°0.0°
C12C3C4H336.3°0.0°
C3C12C7H356.9°0.3°
C4C5C6C21170.5°179.9°
C4C5C21N22174.5°180.0°
C4C5C21O2312.6°0.1°
C4C5C6H34175.6°180.0°
C6C5C21N2215.0°0.1°
C6C5C21O23157.9°180.0°
C5C6C1H32178.9°179.7°
C6C5C4H33177.6°180.0°
C5C21N22O23173.2°179.9°
C21C5C4H3312.0°0.1°
C21C5C6H3413.9°0.1°
C5C21N22H41173.2°180.0°
C5C21N22H406.8°0.1°
C8C7C12H35180.0°179.1°
C7C8C9CL15179.6°179.1°
C7C8C9C103.6°0.5°
C7C8C9C14176.0°179.4°
C8C7C12C112.3°0.6°
C12C7C8C91.4°0.9°
C12C7C8CL15178.2°180.0°
C7C12C11C103.8°0.0°
C7C12C11O13175.9°180.0°
C8C9C10C14179.5°179.9°
C8C9C10C112.0°0.0°
C8C9C10H36178.0°179.7°
C9C8C7H35178.6°179.9°
C8C9C14H3790.3°90.1°
C8C9C14H38149.7°150.0°
C8C9C14H3929.7°29.9°
CL15C8C9C10176.0°179.7°
CL15C8C9C144.5°0.3°
CL15C8C7H351.8°0.9°
C9C10C11H36180.0°179.6°
C9C10C11C121.6°0.3°
C9C10C11O13178.0°179.7°
C10C9C14H3790.2°90.0°
C10C9C14H3829.8°29.9°
C10C9C14H39149.8°150.0°
C14C9C10C11177.5°180.0°
C14C9C10H362.5°0.4°
C9C14H37H38120.0°120.0°
C9C14H37H39120.0°120.0°
C9C14H38H39120.0°120.1°
C10C11C12O13179.7°180.0°
C10C11O13C248.2°0.0°
C12C11O13C24172.1°180.0°
C12C11C10H36178.4°179.9°
C11C12C7H35177.8°179.7°
C11O13C24C25177.7°180.0°
O13C11C10H361.9°0.1°
C11O13C24H4361.9°60.0°
C11O13C24H4257.3°60.0°
O13C24C25H43120.4°120.0°
O13C24C25H42120.4°120.0°
O13C24C25N2669.0°180.0°
O13C24C25N29118.1°0.3°
O13C24H43H42118.7°120.1°
O16C17F18F19106.8°120.1°
O16C17F18F20137.6°119.9°
O16C17F19F20120.5°120.0°
F18C17F19F20119.9°120.0°
C21N22H41H40180.0°179.9°
O23C21N22H410.0°0.1°
O23C21N22H40180.0°180.0°
C24C25N26N29173.9°179.8°
C24C25N26C27172.8°180.0°
C24C25N26C305.1°0.0°
C24C25N29N28172.5°180.0°
C25C24H43H42118.7°120.0°
C25N26C27C30178.0°180.0°
C25N26C27N280.6°0.1°
C25N26C27O31177.9°179.8°
N26C25N29N281.2°0.3°
N26C25C24H43170.6°60.0°
N26C25C24H4251.4°60.0°
C25N26C30H45180.0°90.0°
C25N26C30H4760.0°150.0°
C25N26C30H4660.0°30.0°
N29C25N26C271.1°0.3°
N29C25N26C30179.0°179.7°
C25N29N28C270.8°0.2°
N29C25C24H432.3°119.7°
N29C25C24H42121.5°120.3°
C25N29N28H44179.2°179.9°
N26C27N28O31178.4°180.0°
N26C27N28N290.1°0.0°
N26C27N28H44179.9°180.0°
C27N26C30H452.5°90.0°
C27N26C30H47117.5°30.0°
C27N26C30H46122.5°150.0°
C30N26C27N28178.6°179.9°
C30N26C27O310.1°0.2°
N26C30H45H47120.0°120.0°
N26C30H45H46120.0°120.0°
N26C30H47H46120.0°120.0°
C27N28N29H44180.0°179.9°
O31C27N28N29178.5°180.0°
O31C27N28H441.4°0.1°
H32C1C6H341.1°0.2°
H37C14H38H39120.0°120.0°
H45C30H47H46120.0°120.0°

246905

PDB entries from 2025-12-31

PDB statisticsPDBj update infoContact PDBjnumon