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SummaryGeometryRelated PDB entries

Y23

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01C02doub1.35Å1.48ÅAromatic
C02C03sing1.51Å1.56Å
C03N04sing1.47Å1.38Å
N04C05sing1.47Å1.41Å
C01C06sing1.51Å1.55Å
C05C06sing1.53Å1.41Å
C01C07sing1.45Å1.38ÅAromatic
C07C08doub1.42Å1.44ÅAromatic
C02N09sing1.37Å1.37ÅAromatic
C08N09sing1.37Å1.44ÅAromatic
C10C11sing1.39Å1.42ÅAromatic
C08C12sing1.39Å1.41ÅAromatic
C11C12doub1.38Å1.41ÅAromatic
C07C13sing1.40Å1.41ÅAromatic
C10C13doub1.37Å1.41ÅAromatic
N09C14sing1.46Å1.44Å
C14C15sing1.51Å1.50Å
C15C16doub1.38Å1.40ÅAromatic
C16C17sing1.38Å1.37ÅAromatic
C17C18doub1.40Å1.40ÅAromatic
C18C19sing1.40Å1.40ÅAromatic
C15C20sing1.38Å1.40ÅAromatic
C19C20doub1.38Å1.41ÅAromatic
C18C21sing1.43Å1.49Å
C21N22trip1.14Å1.14Å
C10CL23sing1.74Å1.73Å
N04C24sing1.35Å1.48Å
C24C25sing1.51Å1.54Å
C24O26doub1.21Å1.24Å
C25C27sing1.53Å1.52Å
C27C28sing1.51Å1.51Å
C28N29sing1.37Å1.35ÅAromatic
N29C30sing1.35Å1.37ÅAromatic
C30N31doub1.31Å1.36ÅAromatic
C28C32doub1.35Å1.38ÅAromatic
N31C32sing1.34Å1.35ÅAromatic
C05H35sing1.09Å1.10Å
C05H36sing1.09Å1.10Å
C06H38sing1.09Å1.10Å
C06H37sing1.09Å1.10Å
C11H39sing1.08Å1.08Å
C13H41sing1.08Å1.08Å
C16H44sing1.08Å1.08Å
C17H45sing1.08Å1.08Å
C19H46sing1.08Å1.08Å
C20H47sing1.08Å1.08Å
C25H48sing1.09Å1.10Å
C25H49sing1.09Å1.10Å
C27H51sing1.09Å1.10Å
C27H50sing1.09Å1.10Å
C03H34sing1.09Å1.10Å
C03H33sing1.09Å1.10Å
C12H40sing1.08Å1.08Å
C14H42sing1.09Å1.10Å
C14H43sing1.09Å1.10Å
N29H52sing0.97Å1.00Å
C30H53sing1.08Å1.08Å
C32H54sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01C02C03117.3°123.5°
C02C01C06118.4°124.7°
C02C01C07107.1°107.0°
C01C02N09108.4°109.9°
C02C03N04111.5°107.5°
C03C02N09134.2°126.6°
C02C03H34109.0°109.8°
C02C03H33108.9°109.8°
C03N04C05117.6°118.3°
C03N04C24119.2°120.9°
N04C03H34109.0°109.9°
N04C03H33109.0°109.9°
N04C05C06112.7°108.9°
C05N04C24123.2°120.8°
N04C05H35108.7°109.6°
N04C05H36108.7°109.7°
C01C06C05113.8°109.0°
C06C01C07134.5°128.3°
C01C06H38108.4°109.6°
C01C06H37108.4°109.6°
C06C05H35108.6°109.6°
C06C05H36108.6°109.6°
C05C06H38108.4°109.5°
C05C06H37108.4°109.5°
C01C07C08108.3°106.1°
C01C07C13130.9°132.7°
C07C08N09107.9°107.3°
C07C08C12122.3°120.6°
C08C07C13120.8°121.3°
C02N09C08108.3°109.7°
C02N09C14126.8°125.1°
N09C08C12129.8°132.0°
C08N09C14124.9°125.2°
C10C11C12123.1°122.2°
C11C10C13120.8°122.0°
C11C10CL23118.4°119.0°
C10C11H39118.5°118.9°
C08C12C11115.7°117.0°
C08C12H40122.1°121.6°
C12C11H39118.5°118.9°
C11C12H40122.1°121.5°
C07C13C10117.3°116.9°
C07C13H41121.3°121.6°
C13C10CL23120.7°119.0°
C10C13H41121.4°121.5°
N09C14C15113.7°109.5°
N09C14H42108.4°109.5°
N09C14H43108.4°109.5°
C14C15C16116.3°119.8°
C14C15C20121.1°119.9°
C15C14H42108.4°109.5°
C15C14H43108.4°109.5°
C15C16C17118.9°120.2°
C16C15C20122.5°120.3°
C15C16H44120.5°119.9°
C16C17C18119.3°119.9°
C17C16H44120.6°119.9°
C16C17H45120.4°120.1°
C17C18C19122.8°119.6°
C17C18C21118.7°120.2°
C18C17H45120.4°120.0°
C18C19C20117.5°119.9°
C19C18C21118.5°120.2°
C18C19H46121.3°120.1°
C15C20C19119.0°120.2°
C15C20H47120.5°119.9°
C20C19H46121.2°120.0°
C19C20H47120.5°119.9°
C18C21N22179.0°180.0°
N04C24C25122.8°120.0°
N04C24O26116.7°120.0°
C25C24O26120.4°120.0°
C24C25C27106.2°109.5°
C24C25H48110.3°109.5°
C24C25H49110.3°109.5°
C25C27C28115.5°109.5°
C27C25H48110.3°109.6°
C27C25H49110.3°109.4°
C25C27H51107.9°109.5°
C25C27H50108.0°109.5°
C27C28N29124.6°126.6°
C27C28C32128.4°126.6°
C28C27H51108.0°109.4°
C28C27H50107.9°109.4°
C28N29C30109.2°107.2°
N29C28C32107.0°106.8°
C28N29H52125.4°126.4°
N29C30N31107.2°108.7°
C30N29H52125.4°126.4°
N29C30H53126.4°125.7°
C30N31C32108.3°109.3°
N31C30H53126.4°125.7°
C28C32N31108.3°108.0°
C28C32H54125.8°126.0°
N31C32H54125.8°126.0°
H35C05H36109.5°109.6°
H38C06H37109.5°109.6°
H48C25H49109.5°109.5°
H51C27H50109.4°109.5°
H34C03H33109.5°109.9°
H42C14H43109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01C02C03N09179.0°179.9°
C01C02C03N0416.5°11.3°
C02C01C06C07179.1°179.7°
C02C01C06C0514.6°17.8°
C02C01C07C081.1°0.1°
C01C02N09C080.1°0.2°
C02C01C07C13178.8°180.0°
C01C02N09C14178.5°179.9°
C02C01C06H38135.2°102.1°
C02C01C06H37106.1°137.6°
C01C02C03H34136.8°108.3°
C01C02C03H33103.9°130.8°
C02C03N04H34120.3°119.5°
C02C03N04H33120.3°119.5°
C02C03N04C0549.3°44.5°
C03C02C01C060.9°0.2°
C03C02C01C07179.8°180.0°
C03C02N09C08178.9°179.9°
C03C02N09C142.5°0.2°
C02C03N04C24129.2°135.6°
C02C03H34H33119.0°120.9°
C03N04C05C24178.4°179.9°
C03N04C05C0666.5°64.4°
N04C03C02N09164.6°168.8°
C03N04C24C25179.0°180.0°
C03N04C24O261.0°0.0°
C03N04C05H35173.1°175.7°
C03N04C05H3654.0°55.5°
N04C03H34H33119.1°121.0°
N04C05C06C0143.9°45.2°
N04C05C06H35120.5°119.8°
N04C05C06H36120.5°119.9°
C05N04C24C250.7°0.1°
C05N04C24O26179.4°180.0°
N04C05H35H36118.6°120.3°
N04C05C06H38164.5°74.7°
N04C05C06H3776.8°165.1°
C05N04C03H34169.6°75.0°
C05N04C03H3371.0°164.0°
C01C06C05H38120.6°119.9°
C01C06C05H37120.7°119.9°
C06C01C07C08179.7°179.6°
C06C01C02N09179.9°179.8°
C06C01C07C132.0°0.3°
C01C06C05H35164.4°165.1°
C01C06C05H3676.6°74.7°
C01C06H38H37118.1°120.3°
C05C06C01C07166.3°162.6°
C06C05N04C24111.9°115.7°
C06C05H35H36118.5°120.2°
C05C06H38H37118.0°120.2°
C01C07C08C13178.0°180.0°
C07C01C02N090.6°0.1°
C01C07C08N091.2°0.2°
C01C07C08C12179.0°179.9°
C01C07C13C10179.8°179.9°
C07C01C06H3845.7°77.6°
C07C01C06H3773.0°42.7°
C01C07C13H410.2°0.1°
C07C08N09C020.8°0.2°
C07C08N09C12177.6°179.9°
C07C08C12C111.6°0.1°
C08C07C13C102.3°0.0°
C07C08N09C14177.9°179.9°
C08C07C13H41177.7°180.0°
C07C08C12H40178.4°180.0°
C02N09C08C14178.7°179.7°
C02N09C08C12178.4°179.9°
C02N09C14C1590.7°90.0°
N09C02C03H3444.3°71.7°
N09C02C03H3375.1°49.3°
C02N09C14H4229.9°150.0°
C02N09C14H43148.7°30.0°
N09C08C12C11178.9°179.8°
N09C08C07C13179.2°179.8°
C08N09C14C1590.9°90.4°
N09C08C12H401.1°0.1°
C08N09C14H42148.5°29.6°
C08N09C14H4329.8°149.6°
C10C11C12C080.3°0.1°
C10C11C12H39180.0°180.0°
C11C10C13C070.4°0.1°
C11C10C13CL23177.9°179.9°
C11C10C13H41179.6°180.0°
C10C11C12H40179.7°180.0°
C08C12C11H40180.0°179.9°
C12C08C07C133.0°0.1°
C12C08N09C140.3°0.2°
C08C12C11H39179.7°180.0°
C12C11C10C130.9°0.1°
C12C11C10CL23178.9°180.0°
C07C13C10H41180.0°180.0°
C07C13C10CL23177.5°180.0°
C13C10C11H39179.1°180.0°
N09C14C15H42120.6°120.0°
N09C14C15H43120.6°120.0°
N09C14C15C16105.4°90.0°
N09C14C15C2077.6°90.3°
N09C14H42H43118.1°120.0°
C14C15C16C20176.9°179.7°
C14C15C16C17178.5°179.7°
C14C15C20C19178.2°179.7°
C14C15C16H441.6°0.3°
C14C15C20H471.9°0.3°
C15C14H42H43118.1°120.0°
C15C16C17H44180.0°180.0°
C15C16C17C180.5°0.1°
C16C15C20C191.4°0.0°
C15C16C17H45179.4°179.9°
C16C15C20H47178.7°180.0°
C16C15C14H4215.3°30.0°
C16C15C14H43134.0°150.0°
C16C17C18H45180.0°179.9°
C16C17C18C190.5°0.0°
C17C16C15C201.5°0.0°
C16C17C18C21179.9°180.0°
C17C18C19C21179.5°180.0°
C17C18C19C200.7°0.0°
C17C18C21N225.5°71.3°
C18C17C16H44179.5°180.0°
C17C18C19H46179.3°180.0°
C18C19C20C150.2°0.0°
C18C19C20H46180.0°180.0°
C19C18C21N22174.1°108.7°
C19C18C17H45179.5°179.9°
C18C19C20H47179.8°180.0°
C15C20C19H47180.0°180.0°
C20C15C16H44178.5°180.0°
C15C20C19H46179.7°180.0°
C20C15C14H42161.7°149.7°
C20C15C14H4343.0°29.7°
C20C19C18C21179.8°180.0°
C21C18C17H450.0°0.1°
C21C18C19H460.2°0.0°
CL23C10C11H391.1°0.0°
CL23C10C13H412.5°0.0°
N04C24C25O26180.0°180.0°
N04C24C25C27112.4°180.0°
C24N04C05H358.5°4.2°
C24N04C05H36127.6°124.5°
N04C24C25H48128.1°59.9°
N04C24C25H497.1°60.1°
C24N04C03H348.9°104.9°
C24N04C03H33110.5°16.1°
C24C25C27H48119.5°120.0°
C24C25C27H49119.5°119.9°
C24C25C27C28164.6°180.0°
C24C25H48H49121.5°120.0°
C24C25C27H5143.7°60.0°
C24C25C27H5074.5°60.1°
O26C24C25C2767.7°0.1°
O26C24C25H4851.8°120.0°
O26C24C25H49172.9°120.0°
C25C27C28H51120.9°120.1°
C25C27C28H50120.9°120.0°
C25C27C28N29161.0°95.0°
C25C27C28C3220.1°85.2°
C27C25H48H49121.5°120.0°
C25C27H51H50117.2°120.1°
C27C28N29C32179.0°179.8°
C27C28N29C30179.4°180.0°
C27C28C32N31179.2°179.8°
C28C27C25H4875.9°60.0°
C28C27C25H4945.1°60.1°
C28C27H51H50117.2°119.9°
C27C28N29H520.7°0.1°
C27C28C32H540.8°0.1°
C28N29C30H52180.0°180.0°
C28N29C30N310.3°0.0°
N29C28C32N310.2°0.3°
N29C28C27H5178.1°25.1°
N29C28C27H5040.1°145.1°
C28N29C30H53179.7°180.0°
N29C28C32H54179.8°179.7°
N29C30N31H53180.0°180.0°
C30N29C28C320.3°0.2°
N29C30N31C320.2°0.2°
C30N31C32C280.0°0.4°
N31C30N29H52179.7°180.0°
C30N31C32H54180.0°179.7°
C28C32N31H54180.0°179.9°
C32C28C27H51100.8°154.7°
C32C28C27H50141.0°34.8°
C32C28N29H52179.7°179.8°
C32N31C30H53179.8°179.7°
H35C05C06H3875.0°45.2°
H35C05C06H3743.7°75.1°
H36C05C06H3844.1°165.4°
H36C05C06H37162.8°45.2°
H39C11C12H400.3°0.0°
H44C16C17H450.5°0.1°
H46C19C20H470.2°0.0°
H48C25C27H51163.2°180.0°
H48C25C27H5045.0°60.0°
H49C25C27H5175.8°59.9°
H49C25C27H50166.0°180.0°
H52N29C30H530.3°0.0°

251174

PDB entries from 2026-03-25

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