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SummaryGeometryRelated PDB entries

Y22

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OAACABdoub1.21Å1.25Å
OBACABsing1.35Å1.24Å
CABCACsing1.48Å1.51Å
F28CAWsing1.40Å1.33Å
CACNADdoub1.32Å1.36ÅAromatic
CACCAPsing1.41Å1.40ÅAromatic
NADCAEsing1.33Å1.35ÅAromatic
CAUCATdoub1.38Å1.40ÅAromatic
CAUCAVsing1.38Å1.40ÅAromatic
CATCASsing1.38Å1.40ÅAromatic
NAQCAPsing1.38Å1.36Å
NAQCARsing1.46Å1.46Å
CAPNAOdoub1.32Å1.36ÅAromatic
CAWCAVsing1.51Å1.52Å
CAWF27sing1.40Å1.32Å
CAWF29sing1.40Å1.33Å
CAVCAYdoub1.38Å1.40ÅAromatic
CAECAFdoub1.41Å1.40ÅAromatic
CAECANsing1.47Å1.40ÅAromatic
CAFCAGsing1.36Å1.39ÅAromatic
CASCARsing1.51Å1.52Å
CASCAZdoub1.38Å1.40ÅAromatic
NAOCANsing1.34Å1.36ÅAromatic
CANCAMdoub1.40Å1.40ÅAromatic
CAYCAZsing1.38Å1.40ÅAromatic
CAGCAHdoub1.39Å1.40ÅAromatic
CAMCAHsing1.36Å1.40ÅAromatic
CAHCAIsing1.51Å1.51Å
FALCAIsing1.40Å1.31Å
CAIFAKsing1.40Å1.32Å
CAIFAJsing1.40Å1.31Å
CAUH1sing1.08Å1.08Å
CATH2sing1.08Å1.08Å
CAZH3sing1.08Å1.08Å
CAYH4sing1.08Å1.08Å
CARH5sing1.09Å1.10Å
CARH6sing1.09Å1.10Å
NAQH7sing0.97Å1.00Å
CAMH8sing1.08Å1.08Å
CAGH9sing1.08Å1.08Å
CAFH10sing1.08Å1.08Å
OBAH11sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OAACABOBA121.0°120.0°
OAACABCAC119.3°120.0°
OBACABCAC119.7°120.0°
CABOBAH11109.5°117.1°
CABCACNAD116.8°119.5°
CABCACCAP123.0°119.5°
F28CAWCAV109.6°109.5°
F28CAWF27109.0°109.5°
F28CAWF29109.0°109.5°
NADCACCAP120.2°121.1°
CACNADCAE120.8°119.6°
CACCAPNAQ121.0°119.5°
CACCAPNAO118.7°121.0°
NADCAECAF119.9°121.8°
NADCAECAN119.5°119.4°
CATCAUCAV120.3°120.0°
CAUCATCAS120.6°120.0°
CATCAUH1119.9°120.0°
CAUCATH2119.7°120.0°
CAUCAVCAW120.3°120.0°
CAUCAVCAY119.0°120.0°
CAVCAUH1119.8°120.0°
CATCASCAR121.4°120.0°
CATCASCAZ119.0°120.0°
CASCATH2119.7°120.0°
CAPNAQCAR123.4°120.0°
NAQCAPNAO120.3°119.5°
CAPNAQH7105.9°120.0°
NAQCARCAS111.8°109.5°
NAQCARH5108.9°109.5°
NAQCARH6108.9°109.5°
CARNAQH7105.9°120.0°
CAPNAOCAN121.2°119.5°
CAVCAWF27110.0°109.5°
CAVCAWF29111.5°109.5°
CAWCAVCAY120.6°120.0°
F27CAWF29107.6°109.5°
CAVCAYCAZ120.7°120.0°
CAVCAYH4119.7°120.0°
CAFCAECAN120.6°118.8°
CAECAFCAG119.4°119.5°
CAECAFH10120.3°120.2°
CAECANNAO119.6°119.4°
CAECANCAM119.8°118.8°
CAFCAGCAH120.4°121.7°
CAFCAGH9119.8°119.2°
CAGCAFH10120.3°120.3°
CARCASCAZ119.7°120.0°
CASCARH5108.9°109.4°
CASCARH6108.9°109.4°
CASCAZCAY120.4°120.0°
CASCAZH3119.8°120.0°
NAOCANCAM120.6°121.8°
CANCAMCAH119.7°119.6°
CANCAMH8120.1°120.2°
CAYCAZH3119.8°120.0°
CAZCAYH4119.6°120.0°
CAGCAHCAM120.0°121.6°
CAGCAHCAI119.3°119.2°
CAHCAGH9119.8°119.2°
CAMCAHCAI120.7°119.2°
CAHCAMH8120.1°120.2°
CAHCAIFAL109.2°109.5°
CAHCAIFAK111.2°109.5°
CAHCAIFAJ110.4°109.5°
FALCAIFAK107.8°109.5°
FALCAIFAJ107.4°109.5°
FAKCAIFAJ110.8°109.5°
H5CARH6109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OAACABOBACAC178.7°180.0°
OAACABCACNAD12.9°173.9°
OAACABCACCAP167.5°5.5°
OAACABOBAH110.0°0.0°
OBACABCACNAD165.9°6.2°
OBACABCACCAP13.7°174.4°
CABCACNADCAP179.6°179.4°
CABCACNADCAE179.5°180.0°
CABCACCAPNAQ0.5°0.3°
CABCACCAPNAO179.4°180.0°
CACCABOBAH11178.7°179.9°
F28CAWCAVCAU19.7°150.3°
F28CAWCAVF27119.9°120.0°
F28CAWCAVF29120.9°120.0°
F28CAWF27F29118.1°120.0°
F28CAWCAVCAY160.1°30.0°
NADCACCAPNAQ179.9°179.7°
NADCACCAPNAO0.2°0.6°
CACNADCAECAF179.6°179.6°
CACNADCAECAN0.2°0.3°
CAPCACNADCAE0.2°0.6°
CACCAPNAQNAO179.9°179.8°
CACCAPNAQCAR179.9°174.5°
CACCAPNAOCAN0.1°0.2°
CACCAPNAQH757.9°5.5°
NADCAECAFCAN179.4°179.9°
NADCAECAFCAG179.5°180.0°
NADCAECANNAO0.5°0.0°
NADCAECANCAM179.9°180.0°
NADCAECAFH100.4°0.1°
CATCAUCAVH1180.0°180.0°
CAUCATCASH2180.0°180.0°
CATCAUCAVCAW179.6°180.0°
CATCAUCAVCAY0.2°0.3°
CAUCATCASCAR179.4°180.0°
CAUCATCASCAZ0.4°0.0°
CAVCAUCATCAS0.3°0.0°
CAUCAVCAWCAY179.8°179.7°
CAUCAVCAWF27139.5°89.7°
CAUCAVCAWF29101.2°30.3°
CAUCAVCAYCAZ0.1°0.5°
CAVCAUCATH2179.7°180.0°
CAUCAVCAYH4179.9°179.8°
CATCASCARNAQ12.9°90.0°
CATCASCARCAZ179.8°180.0°
CATCASCAZCAY0.3°0.2°
CASCATCAUH1179.7°180.0°
CATCASCAZH3179.7°179.9°
CATCASCARH5107.4°150.0°
CATCASCARH6133.2°30.0°
CAPNAQCARH7121.9°179.9°
CAPNAQCARCAS84.8°180.0°
NAQCAPNAOCAN179.8°180.0°
CAPNAQCARH5154.8°60.1°
CAPNAQCARH635.5°60.0°
CARNAQCAPNAO0.0°5.3°
NAQCARCASH5120.3°120.0°
NAQCARCASH6120.3°120.0°
NAQCARCASCAZ166.9°90.0°
NAQCARH5H6118.9°120.1°
CAPNAOCANCAE0.5°0.1°
CAPNAOCANCAM179.8°179.9°
NAOCAPNAQH7122.0°174.8°
CAVCAWF27F29121.6°120.0°
CAWCAVCAYCAZ179.7°179.8°
CAWCAVCAUH10.4°0.0°
CAWCAVCAYH40.3°0.1°
F27CAWCAVCAY40.3°90.0°
F29CAWCAVCAY79.0°150.0°
CAVCAYCAZCAS0.2°0.5°
CAVCAYCAZH4180.0°179.7°
CAYCAVCAUH1179.8°179.7°
CAVCAYCAZH3179.8°179.7°
CAECAFCAGH10180.0°179.9°
CAFCAECANNAO179.9°180.0°
CAFCAECANCAM0.7°0.0°
CAECAFCAGCAH0.5°0.0°
CAECAFCAGH9179.5°180.0°
CANCAECAFCAG0.1°0.0°
CAECANNAOCAM179.3°180.0°
CAECANCAMCAH0.7°0.0°
CAECANCAMH8179.3°180.0°
CANCAECAFH10179.8°180.0°
CAFCAGCAHH9180.0°180.0°
CAFCAGCAHCAM0.5°0.0°
CAFCAGCAHCAI179.8°180.0°
CARCASCAZCAY179.5°179.8°
CARCASCATH20.6°0.0°
CARCASCAZH30.5°0.1°
CASCARH5H6119.0°119.9°
CASCARNAQH737.1°0.0°
CASCAZCAYH3180.0°179.9°
CAZCASCATH2179.6°180.0°
CASCAZCAYH4179.8°179.8°
CAZCASCARH572.8°30.1°
CAZCASCARH646.6°150.0°
NAOCANCAMCAH180.0°180.0°
NAOCANCAMH80.0°0.0°
CANCAMCAHCAG0.1°0.0°
CANCAMCAHH8180.0°180.0°
CANCAMCAHCAI179.2°180.0°
CAGCAHCAMCAI179.2°180.0°
CAGCAHCAIFAL43.8°150.0°
CAGCAHCAIFAK162.6°90.0°
CAGCAHCAIFAJ74.0°30.0°
CAGCAHCAMH8179.9°180.0°
CAHCAGCAFH10179.5°179.9°
CAMCAHCAIFAL135.4°30.0°
CAMCAHCAIFAK16.6°90.0°
CAMCAHCAIFAJ106.7°150.0°
CAMCAHCAGH9179.5°180.0°
CAHCAIFALFAK120.9°120.0°
CAHCAIFALFAJ119.7°120.0°
CAHCAIFAKFAJ123.1°120.0°
CAICAHCAMH80.8°0.0°
CAICAHCAGH90.2°0.0°
FALCAIFAKFAJ117.2°120.0°
H1CAUCATH20.3°0.0°
H3CAZCAYH40.2°0.1°
H5CARNAQH783.3°120.0°
H6CARNAQH7157.4°120.0°
H9CAGCAFH100.5°0.1°

220113

PDB entries from 2024-05-22

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